Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0201

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0199 and B158DRAFT_0200 are separated by 114 nucleotidesB158DRAFT_0200 and B158DRAFT_0201 are separated by 5 nucleotidesB158DRAFT_0201 and B158DRAFT_0202 are separated by 48 nucleotides B158DRAFT_0199: B158DRAFT_0199 - hypothetical protein, at 204,703 to 205,152 _0199 B158DRAFT_0200: B158DRAFT_0200 - non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family, at 205,267 to 205,899 _0200 B158DRAFT_0201: B158DRAFT_0201 - coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22), at 205,905 to 207,137 _0201 B158DRAFT_0202: B158DRAFT_0202 - Heat shock protein, at 207,186 to 208,193 _0202 Position (kb) 205 206 207 208Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 204.957 kb on + strand, within B158DRAFT_0199at 204.968 kb on + strand, within B158DRAFT_0199at 205.058 kb on - strand, within B158DRAFT_0199at 205.085 kb on + strand, within B158DRAFT_0199at 205.085 kb on + strand, within B158DRAFT_0199at 205.093 kb on - strand, within B158DRAFT_0199at 205.093 kb on - strand, within B158DRAFT_0199at 205.334 kb on + strand, within B158DRAFT_0200at 205.342 kb on - strand, within B158DRAFT_0200at 205.373 kb on + strand, within B158DRAFT_0200at 205.400 kb on + strand, within B158DRAFT_0200at 205.444 kb on - strand, within B158DRAFT_0200at 205.465 kb on + strand, within B158DRAFT_0200at 205.488 kb on + strand, within B158DRAFT_0200at 205.494 kb on + strand, within B158DRAFT_0200at 205.494 kb on + strand, within B158DRAFT_0200at 205.512 kb on + strand, within B158DRAFT_0200at 205.520 kb on - strand, within B158DRAFT_0200at 205.557 kb on + strand, within B158DRAFT_0200at 205.560 kb on - strand, within B158DRAFT_0200at 205.560 kb on - strand, within B158DRAFT_0200at 205.565 kb on - strand, within B158DRAFT_0200at 205.565 kb on - strand, within B158DRAFT_0200at 205.565 kb on - strand, within B158DRAFT_0200at 205.602 kb on + strand, within B158DRAFT_0200at 205.603 kb on + strand, within B158DRAFT_0200at 205.610 kb on - strand, within B158DRAFT_0200at 205.610 kb on - strand, within B158DRAFT_0200at 205.635 kb on - strand, within B158DRAFT_0200at 205.703 kb on + strand, within B158DRAFT_0200at 205.711 kb on - strand, within B158DRAFT_0200at 205.711 kb on - strand, within B158DRAFT_0200at 205.734 kb on - strand, within B158DRAFT_0200at 205.795 kb on + strand, within B158DRAFT_0200at 205.803 kb on - strand, within B158DRAFT_0200at 205.803 kb on - strand, within B158DRAFT_0200at 205.803 kb on - strand, within B158DRAFT_0200at 205.848 kb on + strandat 205.928 kb on - strandat 205.934 kb on - strandat 205.934 kb on - strandat 206.004 kb on - strandat 206.004 kb on - strandat 206.034 kb on - strand, within B158DRAFT_0201at 206.034 kb on - strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.036 kb on + strand, within B158DRAFT_0201at 206.044 kb on - strand, within B158DRAFT_0201at 206.044 kb on - strand, within B158DRAFT_0201at 206.044 kb on - strand, within B158DRAFT_0201at 206.044 kb on - strand, within B158DRAFT_0201at 206.092 kb on + strand, within B158DRAFT_0201at 206.159 kb on - strand, within B158DRAFT_0201at 206.173 kb on - strand, within B158DRAFT_0201at 206.173 kb on - strand, within B158DRAFT_0201at 206.173 kb on - strand, within B158DRAFT_0201at 206.173 kb on - strand, within B158DRAFT_0201at 206.173 kb on - strand, within B158DRAFT_0201at 206.200 kb on - strand, within B158DRAFT_0201at 206.236 kb on + strand, within B158DRAFT_0201at 206.288 kb on + strand, within B158DRAFT_0201at 206.295 kb on + strand, within B158DRAFT_0201at 206.295 kb on + strand, within B158DRAFT_0201at 206.298 kb on + strand, within B158DRAFT_0201at 206.298 kb on + strand, within B158DRAFT_0201at 206.303 kb on - strand, within B158DRAFT_0201at 206.336 kb on - strand, within B158DRAFT_0201at 206.342 kb on + strand, within B158DRAFT_0201at 206.342 kb on + strand, within B158DRAFT_0201at 206.347 kb on + strand, within B158DRAFT_0201at 206.350 kb on - strand, within B158DRAFT_0201at 206.350 kb on - strand, within B158DRAFT_0201at 206.350 kb on - strand, within B158DRAFT_0201at 206.409 kb on - strand, within B158DRAFT_0201at 206.515 kb on + strand, within B158DRAFT_0201at 206.523 kb on - strand, within B158DRAFT_0201at 206.523 kb on - strand, within B158DRAFT_0201at 206.578 kb on + strand, within B158DRAFT_0201at 206.583 kb on + strand, within B158DRAFT_0201at 206.602 kb on - strand, within B158DRAFT_0201at 206.628 kb on - strand, within B158DRAFT_0201at 206.628 kb on - strand, within B158DRAFT_0201at 206.628 kb on - strand, within B158DRAFT_0201at 206.658 kb on + strand, within B158DRAFT_0201at 206.658 kb on + strand, within B158DRAFT_0201at 206.664 kb on - strand, within B158DRAFT_0201at 206.704 kb on - strand, within B158DRAFT_0201at 206.751 kb on + strand, within B158DRAFT_0201at 206.762 kb on + strand, within B158DRAFT_0201at 206.764 kb on - strand, within B158DRAFT_0201at 206.891 kb on + strand, within B158DRAFT_0201at 206.891 kb on + strand, within B158DRAFT_0201at 206.924 kb on + strand, within B158DRAFT_0201at 206.944 kb on + strand, within B158DRAFT_0201at 206.947 kb on - strand, within B158DRAFT_0201at 206.947 kb on - strand, within B158DRAFT_0201at 206.958 kb on + strand, within B158DRAFT_0201at 206.967 kb on - strand, within B158DRAFT_0201at 207.039 kb on - strandat 207.089 kb on + strandat 207.216 kb on - strandat 207.265 kb on - strandat 207.265 kb on - strandat 207.279 kb on + strandat 207.287 kb on - strand, within B158DRAFT_0202at 207.289 kb on + strand, within B158DRAFT_0202at 207.297 kb on - strand, within B158DRAFT_0202at 207.344 kb on + strand, within B158DRAFT_0202at 207.352 kb on - strand, within B158DRAFT_0202at 207.352 kb on - strand, within B158DRAFT_0202at 207.423 kb on + strand, within B158DRAFT_0202at 207.423 kb on + strand, within B158DRAFT_0202at 207.431 kb on - strand, within B158DRAFT_0202at 207.449 kb on + strand, within B158DRAFT_0202at 207.490 kb on + strand, within B158DRAFT_0202at 207.518 kb on - strand, within B158DRAFT_0202at 207.603 kb on + strand, within B158DRAFT_0202at 207.739 kb on + strand, within B158DRAFT_0202at 207.739 kb on + strand, within B158DRAFT_0202at 207.747 kb on - strand, within B158DRAFT_0202at 207.753 kb on - strand, within B158DRAFT_0202at 207.778 kb on + strand, within B158DRAFT_0202at 207.791 kb on + strand, within B158DRAFT_0202at 207.811 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.834 kb on + strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.842 kb on - strand, within B158DRAFT_0202at 207.850 kb on - strand, within B158DRAFT_0202at 207.882 kb on - strand, within B158DRAFT_0202at 207.922 kb on + strand, within B158DRAFT_0202at 207.930 kb on - strand, within B158DRAFT_0202at 207.930 kb on - strand, within B158DRAFT_0202at 207.962 kb on - strand, within B158DRAFT_0202at 208.033 kb on - strand, within B158DRAFT_0202at 208.053 kb on - strand, within B158DRAFT_0202

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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204,957 + B158DRAFT_0199 0.56 +3.0
204,968 + B158DRAFT_0199 0.59 +2.5
205,058 - B158DRAFT_0199 0.79 -2.0
205,085 + B158DRAFT_0199 0.85 +1.5
205,085 + B158DRAFT_0199 0.85 -1.1
205,093 - B158DRAFT_0199 0.87 -0.3
205,093 - B158DRAFT_0199 0.87 -1.9
205,334 + B158DRAFT_0200 0.11 -0.8
205,342 - B158DRAFT_0200 0.12 -0.7
205,373 + B158DRAFT_0200 0.17 -0.4
205,400 + B158DRAFT_0200 0.21 +1.0
205,444 - B158DRAFT_0200 0.28 -0.1
205,465 + B158DRAFT_0200 0.31 -0.6
205,488 + B158DRAFT_0200 0.35 -1.7
205,494 + B158DRAFT_0200 0.36 -0.3
205,494 + B158DRAFT_0200 0.36 +3.1
205,512 + B158DRAFT_0200 0.39 -2.2
205,520 - B158DRAFT_0200 0.40 +0.8
205,557 + B158DRAFT_0200 0.46 -0.9
205,560 - B158DRAFT_0200 0.46 -0.3
205,560 - B158DRAFT_0200 0.46 -1.1
205,565 - B158DRAFT_0200 0.47 -1.9
205,565 - B158DRAFT_0200 0.47 -0.8
205,565 - B158DRAFT_0200 0.47 +0.9
205,602 + B158DRAFT_0200 0.53 +1.3
205,603 + B158DRAFT_0200 0.53 -0.0
205,610 - B158DRAFT_0200 0.54 -0.9
205,610 - B158DRAFT_0200 0.54 -2.0
205,635 - B158DRAFT_0200 0.58 +2.0
205,703 + B158DRAFT_0200 0.69 -0.7
205,711 - B158DRAFT_0200 0.70 +1.2
205,711 - B158DRAFT_0200 0.70 -0.6
205,734 - B158DRAFT_0200 0.74 -0.3
205,795 + B158DRAFT_0200 0.83 -1.6
205,803 - B158DRAFT_0200 0.85 -0.7
205,803 - B158DRAFT_0200 0.85 -0.9
205,803 - B158DRAFT_0200 0.85 -0.2
205,848 + +0.7
205,928 - -0.9
205,934 - -1.4
205,934 - -1.4
206,004 - +0.2
206,004 - +0.5
206,034 - B158DRAFT_0201 0.10 +0.2
206,034 - B158DRAFT_0201 0.10 -0.3
206,036 + B158DRAFT_0201 0.11 -1.5
206,036 + B158DRAFT_0201 0.11 -1.3
206,036 + B158DRAFT_0201 0.11 -0.5
206,036 + B158DRAFT_0201 0.11 +0.3
206,036 + B158DRAFT_0201 0.11 -1.0
206,036 + B158DRAFT_0201 0.11 -0.1
206,044 - B158DRAFT_0201 0.11 -1.2
206,044 - B158DRAFT_0201 0.11 -2.5
206,044 - B158DRAFT_0201 0.11 -1.0
206,044 - B158DRAFT_0201 0.11 -0.8
206,092 + B158DRAFT_0201 0.15 +3.0
206,159 - B158DRAFT_0201 0.21 -3.2
206,173 - B158DRAFT_0201 0.22 +3.9
206,173 - B158DRAFT_0201 0.22 +0.7
206,173 - B158DRAFT_0201 0.22 +0.3
206,173 - B158DRAFT_0201 0.22 -2.4
206,173 - B158DRAFT_0201 0.22 +1.0
206,200 - B158DRAFT_0201 0.24 -0.3
206,236 + B158DRAFT_0201 0.27 +1.4
206,288 + B158DRAFT_0201 0.31 +0.0
206,295 + B158DRAFT_0201 0.32 -0.8
206,295 + B158DRAFT_0201 0.32 -1.7
206,298 + B158DRAFT_0201 0.32 -0.8
206,298 + B158DRAFT_0201 0.32 -0.4
206,303 - B158DRAFT_0201 0.32 +0.0
206,336 - B158DRAFT_0201 0.35 -0.6
206,342 + B158DRAFT_0201 0.35 +0.3
206,342 + B158DRAFT_0201 0.35 +0.5
206,347 + B158DRAFT_0201 0.36 -0.9
206,350 - B158DRAFT_0201 0.36 -1.1
206,350 - B158DRAFT_0201 0.36 +0.5
206,350 - B158DRAFT_0201 0.36 +1.6
206,409 - B158DRAFT_0201 0.41 -0.4
206,515 + B158DRAFT_0201 0.49 +0.1
206,523 - B158DRAFT_0201 0.50 +0.1
206,523 - B158DRAFT_0201 0.50 -1.2
206,578 + B158DRAFT_0201 0.55 +0.2
206,583 + B158DRAFT_0201 0.55 +0.1
206,602 - B158DRAFT_0201 0.57 -1.4
206,628 - B158DRAFT_0201 0.59 -0.8
206,628 - B158DRAFT_0201 0.59 -0.8
206,628 - B158DRAFT_0201 0.59 -1.2
206,658 + B158DRAFT_0201 0.61 -0.7
206,658 + B158DRAFT_0201 0.61 -0.7
206,664 - B158DRAFT_0201 0.62 -0.2
206,704 - B158DRAFT_0201 0.65 +3.9
206,751 + B158DRAFT_0201 0.69 +0.3
206,762 + B158DRAFT_0201 0.70 -1.1
206,764 - B158DRAFT_0201 0.70 -1.0
206,891 + B158DRAFT_0201 0.80 -0.4
206,891 + B158DRAFT_0201 0.80 -1.3
206,924 + B158DRAFT_0201 0.83 -0.6
206,944 + B158DRAFT_0201 0.84 -1.3
206,947 - B158DRAFT_0201 0.85 -0.2
206,947 - B158DRAFT_0201 0.85 -0.7
206,958 + B158DRAFT_0201 0.85 +1.0
206,967 - B158DRAFT_0201 0.86 -0.7
207,039 - +0.5
207,089 + -0.1
207,216 - -1.4
207,265 - +1.9
207,265 - -2.0
207,279 + +1.3
207,287 - B158DRAFT_0202 0.10 -0.9
207,289 + B158DRAFT_0202 0.10 -0.5
207,297 - B158DRAFT_0202 0.11 -0.6
207,344 + B158DRAFT_0202 0.16 -1.5
207,352 - B158DRAFT_0202 0.16 -1.5
207,352 - B158DRAFT_0202 0.16 +0.1
207,423 + B158DRAFT_0202 0.24 -0.1
207,423 + B158DRAFT_0202 0.24 -0.6
207,431 - B158DRAFT_0202 0.24 -0.8
207,449 + B158DRAFT_0202 0.26 +1.2
207,490 + B158DRAFT_0202 0.30 -0.6
207,518 - B158DRAFT_0202 0.33 -1.6
207,603 + B158DRAFT_0202 0.41 -2.1
207,739 + B158DRAFT_0202 0.55 -0.8
207,739 + B158DRAFT_0202 0.55 -2.2
207,747 - B158DRAFT_0202 0.56 -1.7
207,753 - B158DRAFT_0202 0.56 +1.9
207,778 + B158DRAFT_0202 0.59 +0.7
207,791 + B158DRAFT_0202 0.60 +1.1
207,811 + B158DRAFT_0202 0.62 -1.7
207,834 + B158DRAFT_0202 0.64 +1.3
207,834 + B158DRAFT_0202 0.64 -0.2
207,834 + B158DRAFT_0202 0.64 +0.1
207,834 + B158DRAFT_0202 0.64 -1.6
207,834 + B158DRAFT_0202 0.64 +0.8
207,834 + B158DRAFT_0202 0.64 -1.0
207,834 + B158DRAFT_0202 0.64 -0.2
207,834 + B158DRAFT_0202 0.64 -0.7
207,834 + B158DRAFT_0202 0.64 -1.2
207,834 + B158DRAFT_0202 0.64 +0.8
207,834 + B158DRAFT_0202 0.64 -0.1
207,834 + B158DRAFT_0202 0.64 -1.1
207,834 + B158DRAFT_0202 0.64 -1.0
207,834 + B158DRAFT_0202 0.64 +0.4
207,842 - B158DRAFT_0202 0.65 -0.2
207,842 - B158DRAFT_0202 0.65 -1.6
207,842 - B158DRAFT_0202 0.65 -2.2
207,842 - B158DRAFT_0202 0.65 -1.8
207,842 - B158DRAFT_0202 0.65 -0.5
207,842 - B158DRAFT_0202 0.65 -0.1
207,842 - B158DRAFT_0202 0.65 -1.5
207,842 - B158DRAFT_0202 0.65 +3.1
207,842 - B158DRAFT_0202 0.65 -1.4
207,842 - B158DRAFT_0202 0.65 +1.6
207,842 - B158DRAFT_0202 0.65 -1.8
207,842 - B158DRAFT_0202 0.65 -1.1
207,842 - B158DRAFT_0202 0.65 -0.7
207,842 - B158DRAFT_0202 0.65 -1.4
207,842 - B158DRAFT_0202 0.65 +1.5
207,842 - B158DRAFT_0202 0.65 -0.2
207,842 - B158DRAFT_0202 0.65 -0.9
207,850 - B158DRAFT_0202 0.66 -1.6
207,882 - B158DRAFT_0202 0.69 +1.4
207,922 + B158DRAFT_0202 0.73 -2.2
207,930 - B158DRAFT_0202 0.74 -3.3
207,930 - B158DRAFT_0202 0.74 -0.9
207,962 - B158DRAFT_0202 0.77 -0.5
208,033 - B158DRAFT_0202 0.84 +2.3
208,053 - B158DRAFT_0202 0.86 +0.2

Or see this region's nucleotide sequence