Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0183

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0181 and B158DRAFT_0182 are separated by 8 nucleotidesB158DRAFT_0182 and B158DRAFT_0183 are separated by 18 nucleotidesB158DRAFT_0183 and B158DRAFT_0184 are separated by 20 nucleotidesB158DRAFT_0184 and B158DRAFT_0185 are separated by 14 nucleotides B158DRAFT_0181: B158DRAFT_0181 - CheW-like domain., at 181,944 to 182,408 _0181 B158DRAFT_0182: B158DRAFT_0182 - Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain, at 182,417 to 183,010 _0182 B158DRAFT_0183: B158DRAFT_0183 - Chemotaxis protein histidine kinase and related kinases, at 183,029 to 189,703 _0183 B158DRAFT_0184: B158DRAFT_0184 - Methylase of chemotaxis methyl-accepting proteins, at 189,724 to 190,599 _0184 B158DRAFT_0185: B158DRAFT_0185 - Methyl-accepting chemotaxis protein, at 190,614 to 192,956 _0185 Position (kb) 183 184 185 186 187 188 189 190Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8 9 10at 182.033 kb on - strand, within B158DRAFT_0181at 182.035 kb on + strand, within B158DRAFT_0181at 182.108 kb on - strand, within B158DRAFT_0181at 182.141 kb on + strand, within B158DRAFT_0181at 182.209 kb on - strand, within B158DRAFT_0181at 182.426 kb on - strandat 182.628 kb on - strand, within B158DRAFT_0182at 182.638 kb on - strand, within B158DRAFT_0182at 182.717 kb on - strand, within B158DRAFT_0182at 182.784 kb on + strand, within B158DRAFT_0182at 182.799 kb on + strand, within B158DRAFT_0182at 182.927 kb on - strand, within B158DRAFT_0182at 183.095 kb on - strandat 183.108 kb on + strandat 183.126 kb on - strandat 183.214 kb on + strandat 183.283 kb on + strandat 183.372 kb on - strandat 183.509 kb on - strandat 183.737 kb on - strand, within B158DRAFT_0183at 183.754 kb on - strand, within B158DRAFT_0183at 183.905 kb on - strand, within B158DRAFT_0183at 183.917 kb on - strand, within B158DRAFT_0183at 183.983 kb on - strand, within B158DRAFT_0183at 184.186 kb on + strand, within B158DRAFT_0183at 184.234 kb on + strand, within B158DRAFT_0183at 184.236 kb on + strand, within B158DRAFT_0183at 184.244 kb on - strand, within B158DRAFT_0183at 184.584 kb on + strand, within B158DRAFT_0183at 184.584 kb on + strand, within B158DRAFT_0183at 184.592 kb on - strand, within B158DRAFT_0183at 184.651 kb on - strand, within B158DRAFT_0183at 184.808 kb on + strand, within B158DRAFT_0183at 184.816 kb on + strand, within B158DRAFT_0183at 184.963 kb on - strand, within B158DRAFT_0183at 185.024 kb on + strand, within B158DRAFT_0183at 185.024 kb on + strand, within B158DRAFT_0183at 185.024 kb on + strand, within B158DRAFT_0183at 185.089 kb on - strand, within B158DRAFT_0183at 185.094 kb on - strand, within B158DRAFT_0183at 185.109 kb on + strand, within B158DRAFT_0183at 185.142 kb on + strand, within B158DRAFT_0183at 185.198 kb on + strand, within B158DRAFT_0183at 185.199 kb on + strand, within B158DRAFT_0183at 185.208 kb on - strand, within B158DRAFT_0183at 185.226 kb on + strand, within B158DRAFT_0183at 185.239 kb on + strand, within B158DRAFT_0183at 185.239 kb on + strand, within B158DRAFT_0183at 185.247 kb on - strand, within B158DRAFT_0183at 185.257 kb on + strand, within B158DRAFT_0183at 185.292 kb on + strand, within B158DRAFT_0183at 185.299 kb on + strand, within B158DRAFT_0183at 185.299 kb on + strand, within B158DRAFT_0183at 185.307 kb on - strand, within B158DRAFT_0183at 185.591 kb on + strand, within B158DRAFT_0183at 185.755 kb on + strand, within B158DRAFT_0183at 185.755 kb on + strand, within B158DRAFT_0183at 185.755 kb on + strand, within B158DRAFT_0183at 185.755 kb on + strand, within B158DRAFT_0183at 185.755 kb on + strand, within B158DRAFT_0183at 185.755 kb on + strand, within B158DRAFT_0183at 185.755 kb on + strand, within B158DRAFT_0183at 185.755 kb on + strand, within B158DRAFT_0183at 185.755 kb on + strand, within B158DRAFT_0183at 185.755 kb on + strand, within B158DRAFT_0183at 185.755 kb on + strand, within B158DRAFT_0183at 185.755 kb on + strand, within B158DRAFT_0183at 185.755 kb on + strand, within B158DRAFT_0183at 185.755 kb on + strand, within B158DRAFT_0183at 185.763 kb on - strand, within B158DRAFT_0183at 185.763 kb on - strand, within B158DRAFT_0183at 185.763 kb on - strand, within B158DRAFT_0183at 185.763 kb on - strand, within B158DRAFT_0183at 185.763 kb on - strand, within B158DRAFT_0183at 185.763 kb on - strand, within B158DRAFT_0183at 185.763 kb on - strand, within B158DRAFT_0183at 185.763 kb on - strand, within B158DRAFT_0183at 185.763 kb on - strand, within B158DRAFT_0183at 185.763 kb on - strand, within B158DRAFT_0183at 185.763 kb on - strand, within B158DRAFT_0183at 185.763 kb on - strand, within B158DRAFT_0183at 185.763 kb on - strand, within B158DRAFT_0183at 185.970 kb on - strand, within B158DRAFT_0183at 185.970 kb on - strand, within B158DRAFT_0183at 185.970 kb on - strand, within B158DRAFT_0183at 185.970 kb on - strand, within B158DRAFT_0183at 186.199 kb on + strand, within B158DRAFT_0183at 186.734 kb on - strand, within B158DRAFT_0183at 186.734 kb on - strand, within B158DRAFT_0183at 186.738 kb on + strand, within B158DRAFT_0183at 186.804 kb on - strand, within B158DRAFT_0183at 186.827 kb on - strand, within B158DRAFT_0183at 186.872 kb on + strand, within B158DRAFT_0183at 186.880 kb on - strand, within B158DRAFT_0183at 186.880 kb on - strand, within B158DRAFT_0183at 186.880 kb on - strand, within B158DRAFT_0183at 186.982 kb on + strand, within B158DRAFT_0183at 187.068 kb on - strand, within B158DRAFT_0183at 187.087 kb on - strand, within B158DRAFT_0183at 187.131 kb on - strand, within B158DRAFT_0183at 187.288 kb on - strand, within B158DRAFT_0183at 187.338 kb on - strand, within B158DRAFT_0183at 187.339 kb on + strand, within B158DRAFT_0183at 187.347 kb on - strand, within B158DRAFT_0183at 187.347 kb on - strand, within B158DRAFT_0183at 187.387 kb on + strand, within B158DRAFT_0183at 187.387 kb on + strand, within B158DRAFT_0183at 187.395 kb on - strand, within B158DRAFT_0183at 187.395 kb on - strand, within B158DRAFT_0183at 187.428 kb on - strand, within B158DRAFT_0183at 187.438 kb on - strand, within B158DRAFT_0183at 187.447 kb on - strand, within B158DRAFT_0183at 187.497 kb on - strand, within B158DRAFT_0183at 187.566 kb on + strand, within B158DRAFT_0183at 187.666 kb on + strand, within B158DRAFT_0183at 187.771 kb on + strand, within B158DRAFT_0183at 187.918 kb on + strand, within B158DRAFT_0183at 188.034 kb on + strand, within B158DRAFT_0183at 188.078 kb on - strand, within B158DRAFT_0183at 188.084 kb on + strand, within B158DRAFT_0183at 188.092 kb on + strand, within B158DRAFT_0183at 188.092 kb on + strand, within B158DRAFT_0183at 188.092 kb on + strand, within B158DRAFT_0183at 188.092 kb on + strand, within B158DRAFT_0183at 188.092 kb on + strand, within B158DRAFT_0183at 188.092 kb on + strand, within B158DRAFT_0183at 188.100 kb on - strand, within B158DRAFT_0183at 188.100 kb on - strand, within B158DRAFT_0183at 188.125 kb on + strand, within B158DRAFT_0183at 188.676 kb on + strand, within B158DRAFT_0183at 188.694 kb on - strand, within B158DRAFT_0183at 188.759 kb on - strand, within B158DRAFT_0183at 188.855 kb on + strand, within B158DRAFT_0183at 188.858 kb on - strand, within B158DRAFT_0183at 188.891 kb on + strand, within B158DRAFT_0183at 188.926 kb on - strand, within B158DRAFT_0183at 189.146 kb on - strandat 189.724 kb on + strandat 189.773 kb on + strandat 190.164 kb on - strand, within B158DRAFT_0184at 190.205 kb on + strand, within B158DRAFT_0184at 190.205 kb on + strand, within B158DRAFT_0184at 190.205 kb on + strand, within B158DRAFT_0184at 190.205 kb on + strand, within B158DRAFT_0184at 190.213 kb on - strand, within B158DRAFT_0184at 190.213 kb on - strand, within B158DRAFT_0184at 190.213 kb on - strand, within B158DRAFT_0184at 190.213 kb on - strand, within B158DRAFT_0184at 190.251 kb on - strand, within B158DRAFT_0184at 190.452 kb on + strand, within B158DRAFT_0184at 190.452 kb on - strand, within B158DRAFT_0184

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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182,033 - B158DRAFT_0181 0.19 +0.1
182,035 + B158DRAFT_0181 0.20 -0.1
182,108 - B158DRAFT_0181 0.35 -1.4
182,141 + B158DRAFT_0181 0.42 -0.1
182,209 - B158DRAFT_0181 0.57 -0.3
182,426 - -2.0
182,628 - B158DRAFT_0182 0.36 -1.0
182,638 - B158DRAFT_0182 0.37 +0.2
182,717 - B158DRAFT_0182 0.51 -0.3
182,784 + B158DRAFT_0182 0.62 -1.5
182,799 + B158DRAFT_0182 0.64 -0.7
182,927 - B158DRAFT_0182 0.86 -1.4
183,095 - +0.4
183,108 + +1.4
183,126 - +10.6
183,214 + -2.8
183,283 + -1.6
183,372 - +0.4
183,509 - -0.4
183,737 - B158DRAFT_0183 0.11 +0.8
183,754 - B158DRAFT_0183 0.11 -1.4
183,905 - B158DRAFT_0183 0.13 +1.3
183,917 - B158DRAFT_0183 0.13 +0.7
183,983 - B158DRAFT_0183 0.14 +0.3
184,186 + B158DRAFT_0183 0.17 +0.4
184,234 + B158DRAFT_0183 0.18 -0.1
184,236 + B158DRAFT_0183 0.18 +1.0
184,244 - B158DRAFT_0183 0.18 -0.1
184,584 + B158DRAFT_0183 0.23 +0.2
184,584 + B158DRAFT_0183 0.23 -1.2
184,592 - B158DRAFT_0183 0.23 +0.8
184,651 - B158DRAFT_0183 0.24 +0.2
184,808 + B158DRAFT_0183 0.27 -0.6
184,816 + B158DRAFT_0183 0.27 +0.7
184,963 - B158DRAFT_0183 0.29 +0.4
185,024 + B158DRAFT_0183 0.30 -0.0
185,024 + B158DRAFT_0183 0.30 +2.4
185,024 + B158DRAFT_0183 0.30 +1.8
185,089 - B158DRAFT_0183 0.31 +0.1
185,094 - B158DRAFT_0183 0.31 +0.6
185,109 + B158DRAFT_0183 0.31 -0.1
185,142 + B158DRAFT_0183 0.32 +0.3
185,198 + B158DRAFT_0183 0.32 +0.8
185,199 + B158DRAFT_0183 0.33 +0.5
185,208 - B158DRAFT_0183 0.33 +1.1
185,226 + B158DRAFT_0183 0.33 +2.2
185,239 + B158DRAFT_0183 0.33 +1.0
185,239 + B158DRAFT_0183 0.33 +0.9
185,247 - B158DRAFT_0183 0.33 +2.2
185,257 + B158DRAFT_0183 0.33 +1.2
185,292 + B158DRAFT_0183 0.34 +0.3
185,299 + B158DRAFT_0183 0.34 +1.4
185,299 + B158DRAFT_0183 0.34 +1.5
185,307 - B158DRAFT_0183 0.34 +1.3
185,591 + B158DRAFT_0183 0.38 -0.1
185,755 + B158DRAFT_0183 0.41 +0.6
185,755 + B158DRAFT_0183 0.41 +0.5
185,755 + B158DRAFT_0183 0.41 -0.2
185,755 + B158DRAFT_0183 0.41 -0.2
185,755 + B158DRAFT_0183 0.41 +0.4
185,755 + B158DRAFT_0183 0.41 +0.3
185,755 + B158DRAFT_0183 0.41 -0.1
185,755 + B158DRAFT_0183 0.41 -0.6
185,755 + B158DRAFT_0183 0.41 +1.5
185,755 + B158DRAFT_0183 0.41 +0.5
185,755 + B158DRAFT_0183 0.41 +1.2
185,755 + B158DRAFT_0183 0.41 +4.2
185,755 + B158DRAFT_0183 0.41 +2.1
185,755 + B158DRAFT_0183 0.41 +0.5
185,763 - B158DRAFT_0183 0.41 +0.8
185,763 - B158DRAFT_0183 0.41 +1.2
185,763 - B158DRAFT_0183 0.41 +0.9
185,763 - B158DRAFT_0183 0.41 +0.3
185,763 - B158DRAFT_0183 0.41 +0.9
185,763 - B158DRAFT_0183 0.41 +1.4
185,763 - B158DRAFT_0183 0.41 +1.4
185,763 - B158DRAFT_0183 0.41 +0.1
185,763 - B158DRAFT_0183 0.41 +0.7
185,763 - B158DRAFT_0183 0.41 +0.5
185,763 - B158DRAFT_0183 0.41 +1.2
185,763 - B158DRAFT_0183 0.41 +2.4
185,763 - B158DRAFT_0183 0.41 +1.2
185,970 - B158DRAFT_0183 0.44 -0.2
185,970 - B158DRAFT_0183 0.44 +1.1
185,970 - B158DRAFT_0183 0.44 -1.3
185,970 - B158DRAFT_0183 0.44 -1.1
186,199 + B158DRAFT_0183 0.47 +2.4
186,734 - B158DRAFT_0183 0.56 -0.1
186,734 - B158DRAFT_0183 0.56 +1.0
186,738 + B158DRAFT_0183 0.56 +0.3
186,804 - B158DRAFT_0183 0.57 +2.0
186,827 - B158DRAFT_0183 0.57 -0.3
186,872 + B158DRAFT_0183 0.58 +2.1
186,880 - B158DRAFT_0183 0.58 +0.0
186,880 - B158DRAFT_0183 0.58 +1.5
186,880 - B158DRAFT_0183 0.58 +0.1
186,982 + B158DRAFT_0183 0.59 +0.1
187,068 - B158DRAFT_0183 0.61 +0.5
187,087 - B158DRAFT_0183 0.61 +1.3
187,131 - B158DRAFT_0183 0.61 +2.4
187,288 - B158DRAFT_0183 0.64 +1.3
187,338 - B158DRAFT_0183 0.65 -1.1
187,339 + B158DRAFT_0183 0.65 -0.5
187,347 - B158DRAFT_0183 0.65 +2.0
187,347 - B158DRAFT_0183 0.65 -1.4
187,387 + B158DRAFT_0183 0.65 +0.2
187,387 + B158DRAFT_0183 0.65 +0.7
187,395 - B158DRAFT_0183 0.65 +0.2
187,395 - B158DRAFT_0183 0.65 +1.6
187,428 - B158DRAFT_0183 0.66 +1.5
187,438 - B158DRAFT_0183 0.66 +2.6
187,447 - B158DRAFT_0183 0.66 +1.2
187,497 - B158DRAFT_0183 0.67 +1.2
187,566 + B158DRAFT_0183 0.68 +3.4
187,666 + B158DRAFT_0183 0.69 +1.0
187,771 + B158DRAFT_0183 0.71 +0.5
187,918 + B158DRAFT_0183 0.73 +0.1
188,034 + B158DRAFT_0183 0.75 -0.3
188,078 - B158DRAFT_0183 0.76 +0.3
188,084 + B158DRAFT_0183 0.76 +2.2
188,092 + B158DRAFT_0183 0.76 +1.1
188,092 + B158DRAFT_0183 0.76 +1.6
188,092 + B158DRAFT_0183 0.76 +0.8
188,092 + B158DRAFT_0183 0.76 +0.8
188,092 + B158DRAFT_0183 0.76 +0.8
188,092 + B158DRAFT_0183 0.76 +1.3
188,100 - B158DRAFT_0183 0.76 +1.1
188,100 - B158DRAFT_0183 0.76 -1.3
188,125 + B158DRAFT_0183 0.76 +0.9
188,676 + B158DRAFT_0183 0.85 +0.5
188,694 - B158DRAFT_0183 0.85 +1.0
188,759 - B158DRAFT_0183 0.86 +2.0
188,855 + B158DRAFT_0183 0.87 +2.2
188,858 - B158DRAFT_0183 0.87 +0.3
188,891 + B158DRAFT_0183 0.88 +1.6
188,926 - B158DRAFT_0183 0.88 +0.9
189,146 - -0.1
189,724 + +1.7
189,773 + +1.8
190,164 - B158DRAFT_0184 0.50 -2.0
190,205 + B158DRAFT_0184 0.55 +0.4
190,205 + B158DRAFT_0184 0.55 +0.9
190,205 + B158DRAFT_0184 0.55 +0.3
190,205 + B158DRAFT_0184 0.55 +1.2
190,213 - B158DRAFT_0184 0.56 -2.3
190,213 - B158DRAFT_0184 0.56 +1.0
190,213 - B158DRAFT_0184 0.56 -1.0
190,213 - B158DRAFT_0184 0.56 -1.5
190,251 - B158DRAFT_0184 0.60 +1.4
190,452 + B158DRAFT_0184 0.83 +0.4
190,452 - B158DRAFT_0184 0.83 +3.0

Or see this region's nucleotide sequence