Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0122 and B158DRAFT_0123 are separated by 14 nucleotides B158DRAFT_0123 and B158DRAFT_0124 are separated by 2 nucleotides B158DRAFT_0124 and B158DRAFT_0125 overlap by 8 nucleotides B158DRAFT_0125 and B158DRAFT_0126 overlap by 23 nucleotides
B158DRAFT_0122: B158DRAFT_0122 - NADH-quinone oxidoreductase, F subunit, at 119,992 to 121,287
_0122
B158DRAFT_0123: B158DRAFT_0123 - NADH dehydrogenase subunit E (EC 1.6.5.3), at 121,302 to 121,796
_0123
B158DRAFT_0124: B158DRAFT_0124 - NADH dehydrogenase subunit D (EC 1.6.5.3), at 121,799 to 123,052
_0124
B158DRAFT_0125: B158DRAFT_0125 - NADH dehydrogenase subunit C (EC 1.6.5.3), at 123,045 to 123,755
_0125
B158DRAFT_0126: B158DRAFT_0126 - NADH-quinone oxidoreductase, B subunit, at 123,733 to 124,296
_0126
Position (kb) 121
122
123
124 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6
7
8
9 at 120.819 kb on + strand, within B158DRAFT_0122 at 120.826 kb on + strand, within B158DRAFT_0122 at 120.826 kb on - strand, within B158DRAFT_0122 at 120.891 kb on + strand, within B158DRAFT_0122 at 120.933 kb on + strand, within B158DRAFT_0122 at 120.976 kb on - strand, within B158DRAFT_0122 at 120.980 kb on - strand, within B158DRAFT_0122 at 121.011 kb on + strand, within B158DRAFT_0122 at 121.011 kb on + strand, within B158DRAFT_0122 at 121.011 kb on + strand, within B158DRAFT_0122 at 121.019 kb on - strand, within B158DRAFT_0122 at 121.067 kb on + strand, within B158DRAFT_0122 at 121.080 kb on + strand, within B158DRAFT_0122 at 121.101 kb on - strand, within B158DRAFT_0122 at 121.119 kb on + strand, within B158DRAFT_0122 at 121.129 kb on + strand, within B158DRAFT_0122 at 121.129 kb on + strand, within B158DRAFT_0122 at 121.208 kb on - strand at 121.228 kb on + strand at 121.238 kb on + strand at 121.238 kb on + strand at 121.299 kb on + strand at 121.299 kb on + strand at 121.307 kb on - strand at 121.307 kb on - strand at 121.308 kb on - strand at 121.423 kb on - strand, within B158DRAFT_0123 at 121.436 kb on + strand, within B158DRAFT_0123 at 121.444 kb on - strand, within B158DRAFT_0123 at 121.451 kb on - strand, within B158DRAFT_0123 at 121.462 kb on - strand, within B158DRAFT_0123 at 121.462 kb on - strand, within B158DRAFT_0123 at 121.659 kb on + strand, within B158DRAFT_0123 at 121.659 kb on + strand, within B158DRAFT_0123 at 121.680 kb on + strand, within B158DRAFT_0123 at 121.717 kb on + strand, within B158DRAFT_0123 at 121.717 kb on + strand, within B158DRAFT_0123 at 121.717 kb on + strand, within B158DRAFT_0123 at 121.828 kb on + strand at 121.829 kb on - strand at 121.914 kb on + strand at 121.958 kb on - strand, within B158DRAFT_0124 at 121.998 kb on + strand, within B158DRAFT_0124 at 122.014 kb on + strand, within B158DRAFT_0124 at 122.030 kb on - strand, within B158DRAFT_0124 at 122.030 kb on - strand, within B158DRAFT_0124 at 122.030 kb on - strand, within B158DRAFT_0124 at 122.030 kb on - strand, within B158DRAFT_0124 at 122.131 kb on - strand, within B158DRAFT_0124 at 122.142 kb on - strand, within B158DRAFT_0124 at 122.155 kb on - strand, within B158DRAFT_0124 at 122.155 kb on - strand, within B158DRAFT_0124 at 122.155 kb on - strand, within B158DRAFT_0124 at 122.261 kb on + strand, within B158DRAFT_0124 at 122.269 kb on - strand, within B158DRAFT_0124 at 122.290 kb on - strand, within B158DRAFT_0124 at 122.293 kb on + strand, within B158DRAFT_0124 at 122.301 kb on - strand, within B158DRAFT_0124 at 122.302 kb on - strand, within B158DRAFT_0124 at 122.302 kb on - strand, within B158DRAFT_0124 at 122.305 kb on + strand, within B158DRAFT_0124 at 122.305 kb on + strand, within B158DRAFT_0124 at 122.313 kb on - strand, within B158DRAFT_0124 at 122.313 kb on - strand, within B158DRAFT_0124 at 122.315 kb on + strand, within B158DRAFT_0124 at 122.320 kb on + strand, within B158DRAFT_0124 at 122.320 kb on + strand, within B158DRAFT_0124 at 122.320 kb on + strand, within B158DRAFT_0124 at 122.328 kb on - strand, within B158DRAFT_0124 at 122.352 kb on + strand, within B158DRAFT_0124 at 122.353 kb on + strand, within B158DRAFT_0124 at 122.353 kb on + strand, within B158DRAFT_0124 at 122.353 kb on + strand, within B158DRAFT_0124 at 122.353 kb on + strand, within B158DRAFT_0124 at 122.358 kb on + strand, within B158DRAFT_0124 at 122.358 kb on + strand, within B158DRAFT_0124 at 122.361 kb on - strand, within B158DRAFT_0124 at 122.361 kb on - strand, within B158DRAFT_0124 at 122.361 kb on - strand, within B158DRAFT_0124 at 122.361 kb on - strand, within B158DRAFT_0124 at 122.361 kb on - strand, within B158DRAFT_0124 at 122.361 kb on - strand, within B158DRAFT_0124 at 122.361 kb on - strand, within B158DRAFT_0124 at 122.361 kb on - strand, within B158DRAFT_0124 at 122.372 kb on + strand, within B158DRAFT_0124 at 122.428 kb on + strand, within B158DRAFT_0124 at 122.455 kb on - strand, within B158DRAFT_0124 at 122.481 kb on + strand, within B158DRAFT_0124 at 122.496 kb on + strand, within B158DRAFT_0124 at 122.496 kb on + strand, within B158DRAFT_0124 at 122.504 kb on - strand, within B158DRAFT_0124 at 122.504 kb on - strand, within B158DRAFT_0124 at 122.504 kb on - strand, within B158DRAFT_0124 at 122.514 kb on - strand, within B158DRAFT_0124 at 122.538 kb on + strand, within B158DRAFT_0124 at 122.538 kb on + strand, within B158DRAFT_0124 at 122.546 kb on - strand, within B158DRAFT_0124 at 122.656 kb on + strand, within B158DRAFT_0124 at 122.709 kb on - strand, within B158DRAFT_0124 at 122.773 kb on - strand, within B158DRAFT_0124 at 122.783 kb on - strand, within B158DRAFT_0124 at 122.784 kb on + strand, within B158DRAFT_0124 at 122.793 kb on + strand, within B158DRAFT_0124 at 122.793 kb on - strand, within B158DRAFT_0124 at 122.793 kb on - strand, within B158DRAFT_0124 at 122.793 kb on - strand, within B158DRAFT_0124 at 122.817 kb on + strand, within B158DRAFT_0124 at 122.817 kb on + strand, within B158DRAFT_0124 at 122.828 kb on - strand, within B158DRAFT_0124 at 122.835 kb on - strand, within B158DRAFT_0124 at 122.889 kb on + strand, within B158DRAFT_0124 at 122.906 kb on + strand, within B158DRAFT_0124 at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.065 kb on + strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.073 kb on - strand at 123.078 kb on - strand at 123.083 kb on - strand at 123.134 kb on + strand, within B158DRAFT_0125 at 123.142 kb on - strand, within B158DRAFT_0125 at 123.178 kb on - strand, within B158DRAFT_0125 at 123.188 kb on + strand, within B158DRAFT_0125 at 123.188 kb on + strand, within B158DRAFT_0125 at 123.188 kb on + strand, within B158DRAFT_0125 at 123.196 kb on - strand, within B158DRAFT_0125 at 123.267 kb on + strand, within B158DRAFT_0125 at 123.308 kb on - strand, within B158DRAFT_0125 at 123.322 kb on - strand, within B158DRAFT_0125 at 123.331 kb on - strand, within B158DRAFT_0125 at 123.331 kb on - strand, within B158DRAFT_0125 at 123.331 kb on - strand, within B158DRAFT_0125 at 123.331 kb on - strand, within B158DRAFT_0125 at 123.333 kb on + strand, within B158DRAFT_0125 at 123.333 kb on + strand, within B158DRAFT_0125 at 123.333 kb on + strand, within B158DRAFT_0125 at 123.333 kb on + strand, within B158DRAFT_0125 at 123.341 kb on - strand, within B158DRAFT_0125 at 123.341 kb on - strand, within B158DRAFT_0125 at 123.341 kb on - strand, within B158DRAFT_0125 at 123.348 kb on - strand, within B158DRAFT_0125 at 123.367 kb on + strand, within B158DRAFT_0125 at 123.375 kb on - strand, within B158DRAFT_0125 at 123.384 kb on + strand, within B158DRAFT_0125 at 123.392 kb on - strand, within B158DRAFT_0125 at 123.470 kb on + strand, within B158DRAFT_0125 at 123.478 kb on - strand, within B158DRAFT_0125 at 123.478 kb on - strand, within B158DRAFT_0125 at 123.483 kb on - strand, within B158DRAFT_0125 at 123.498 kb on + strand, within B158DRAFT_0125 at 123.498 kb on + strand, within B158DRAFT_0125 at 123.498 kb on + strand, within B158DRAFT_0125 at 123.498 kb on + strand, within B158DRAFT_0125 at 123.506 kb on - strand, within B158DRAFT_0125 at 123.506 kb on - strand, within B158DRAFT_0125 at 123.518 kb on + strand, within B158DRAFT_0125 at 123.518 kb on + strand, within B158DRAFT_0125 at 123.518 kb on + strand, within B158DRAFT_0125 at 123.518 kb on + strand, within B158DRAFT_0125 at 123.526 kb on - strand, within B158DRAFT_0125 at 123.561 kb on - strand, within B158DRAFT_0125 at 123.694 kb on - strand at 123.706 kb on + strand at 123.901 kb on + strand, within B158DRAFT_0126 at 123.941 kb on - strand, within B158DRAFT_0126 at 124.002 kb on + strand, within B158DRAFT_0126 at 124.037 kb on - strand, within B158DRAFT_0126 at 124.047 kb on + strand, within B158DRAFT_0126
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 120,819 + B158DRAFT_0122 0.64 +7.4 120,826 + B158DRAFT_0122 0.64 +7.9 120,826 - B158DRAFT_0122 0.64 +2.3 120,891 + B158DRAFT_0122 0.69 +7.1 120,933 + B158DRAFT_0122 0.73 +7.4 120,976 - B158DRAFT_0122 0.76 +1.4 120,980 - B158DRAFT_0122 0.76 +2.6 121,011 + B158DRAFT_0122 0.79 +6.1 121,011 + B158DRAFT_0122 0.79 +5.5 121,011 + B158DRAFT_0122 0.79 +5.7 121,019 - B158DRAFT_0122 0.79 +2.1 121,067 + B158DRAFT_0122 0.83 +7.7 121,080 + B158DRAFT_0122 0.84 +7.5 121,101 - B158DRAFT_0122 0.86 +1.9 121,119 + B158DRAFT_0122 0.87 +7.4 121,129 + B158DRAFT_0122 0.88 +7.4 121,129 + B158DRAFT_0122 0.88 +9.7 121,208 - +1.6 121,228 + +7.6 121,238 + +7.2 121,238 + +7.6 121,299 + +7.3 121,299 + +7.3 121,307 - +0.4 121,307 - +3.0 121,308 - -0.6 121,423 - B158DRAFT_0123 0.24 +0.7 121,436 + B158DRAFT_0123 0.27 +8.1 121,444 - B158DRAFT_0123 0.29 +1.3 121,451 - B158DRAFT_0123 0.30 +2.2 121,462 - B158DRAFT_0123 0.32 +1.2 121,462 - B158DRAFT_0123 0.32 +1.2 121,659 + B158DRAFT_0123 0.72 +7.2 121,659 + B158DRAFT_0123 0.72 +7.3 121,680 + B158DRAFT_0123 0.76 +6.9 121,717 + B158DRAFT_0123 0.84 +7.2 121,717 + B158DRAFT_0123 0.84 +7.4 121,717 + B158DRAFT_0123 0.84 +7.2 121,828 + +7.6 121,829 - +7.9 121,914 + +7.5 121,958 - B158DRAFT_0124 0.13 +7.9 121,998 + B158DRAFT_0124 0.16 +7.4 122,014 + B158DRAFT_0124 0.17 +7.9 122,030 - B158DRAFT_0124 0.18 +7.5 122,030 - B158DRAFT_0124 0.18 +7.5 122,030 - B158DRAFT_0124 0.18 +7.6 122,030 - B158DRAFT_0124 0.18 +7.5 122,131 - B158DRAFT_0124 0.26 +7.2 122,142 - B158DRAFT_0124 0.27 +7.3 122,155 - B158DRAFT_0124 0.28 +7.6 122,155 - B158DRAFT_0124 0.28 +7.7 122,155 - B158DRAFT_0124 0.28 +7.4 122,261 + B158DRAFT_0124 0.37 +7.4 122,269 - B158DRAFT_0124 0.37 +6.9 122,290 - B158DRAFT_0124 0.39 +7.8 122,293 + B158DRAFT_0124 0.39 +7.4 122,301 - B158DRAFT_0124 0.40 +7.5 122,302 - B158DRAFT_0124 0.40 +7.5 122,302 - B158DRAFT_0124 0.40 +7.3 122,305 + B158DRAFT_0124 0.40 +7.6 122,305 + B158DRAFT_0124 0.40 +7.7 122,313 - B158DRAFT_0124 0.41 +7.7 122,313 - B158DRAFT_0124 0.41 +7.4 122,315 + B158DRAFT_0124 0.41 +8.0 122,320 + B158DRAFT_0124 0.42 +7.5 122,320 + B158DRAFT_0124 0.42 +7.7 122,320 + B158DRAFT_0124 0.42 +7.7 122,328 - B158DRAFT_0124 0.42 +7.5 122,352 + B158DRAFT_0124 0.44 +7.3 122,353 + B158DRAFT_0124 0.44 +8.4 122,353 + B158DRAFT_0124 0.44 +7.7 122,353 + B158DRAFT_0124 0.44 +7.1 122,353 + B158DRAFT_0124 0.44 +7.2 122,358 + B158DRAFT_0124 0.45 +7.2 122,358 + B158DRAFT_0124 0.45 +7.6 122,361 - B158DRAFT_0124 0.45 +7.9 122,361 - B158DRAFT_0124 0.45 +7.3 122,361 - B158DRAFT_0124 0.45 +7.6 122,361 - B158DRAFT_0124 0.45 +7.6 122,361 - B158DRAFT_0124 0.45 +7.6 122,361 - B158DRAFT_0124 0.45 +7.4 122,361 - B158DRAFT_0124 0.45 +7.8 122,361 - B158DRAFT_0124 0.45 +7.5 122,372 + B158DRAFT_0124 0.46 +7.8 122,428 + B158DRAFT_0124 0.50 +7.6 122,455 - B158DRAFT_0124 0.52 +7.7 122,481 + B158DRAFT_0124 0.54 +8.0 122,496 + B158DRAFT_0124 0.56 +7.7 122,496 + B158DRAFT_0124 0.56 +7.6 122,504 - B158DRAFT_0124 0.56 +7.5 122,504 - B158DRAFT_0124 0.56 +7.9 122,504 - B158DRAFT_0124 0.56 +7.7 122,514 - B158DRAFT_0124 0.57 +7.2 122,538 + B158DRAFT_0124 0.59 +7.5 122,538 + B158DRAFT_0124 0.59 +7.0 122,546 - B158DRAFT_0124 0.60 +7.6 122,656 + B158DRAFT_0124 0.68 +7.7 122,709 - B158DRAFT_0124 0.73 +7.7 122,773 - B158DRAFT_0124 0.78 +7.7 122,783 - B158DRAFT_0124 0.78 +7.4 122,784 + B158DRAFT_0124 0.79 +8.1 122,793 + B158DRAFT_0124 0.79 +7.6 122,793 - B158DRAFT_0124 0.79 +7.6 122,793 - B158DRAFT_0124 0.79 +7.4 122,793 - B158DRAFT_0124 0.79 +7.5 122,817 + B158DRAFT_0124 0.81 +6.9 122,817 + B158DRAFT_0124 0.81 +7.5 122,828 - B158DRAFT_0124 0.82 +7.6 122,835 - B158DRAFT_0124 0.83 +7.3 122,889 + B158DRAFT_0124 0.87 +7.2 122,906 + B158DRAFT_0124 0.88 +7.7 123,065 + +7.7 123,065 + +7.4 123,065 + +7.5 123,065 + +7.7 123,065 + +7.6 123,065 + +7.4 123,065 + +6.9 123,065 + +7.8 123,065 + +7.5 123,065 + +7.7 123,065 + +7.5 123,065 + +7.6 123,065 + +8.2 123,065 + +7.6 123,065 + +7.3 123,065 + +7.8 123,065 + +7.5 123,065 + +7.6 123,065 + +7.5 123,065 + +7.8 123,065 + +7.0 123,065 + +7.5 123,065 + +7.4 123,065 + +7.5 123,065 + +7.6 123,065 + +7.4 123,065 + +7.6 123,065 + +7.7 123,065 + +7.5 123,073 - +0.3 123,073 - +0.6 123,073 - -0.5 123,073 - +0.5 123,073 - +1.0 123,073 - +2.1 123,073 - -0.5 123,073 - +1.8 123,073 - -0.3 123,073 - -1.1 123,073 - +0.2 123,073 - +5.2 123,073 - +0.1 123,073 - +2.2 123,073 - -0.6 123,073 - -0.9 123,073 - +1.6 123,073 - -0.5 123,073 - +0.6 123,073 - +0.8 123,078 - +1.2 123,083 - +6.3 123,134 + B158DRAFT_0125 0.13 +7.6 123,142 - B158DRAFT_0125 0.14 +7.6 123,178 - B158DRAFT_0125 0.19 +7.6 123,188 + B158DRAFT_0125 0.20 +7.7 123,188 + B158DRAFT_0125 0.20 +7.5 123,188 + B158DRAFT_0125 0.20 +7.4 123,196 - B158DRAFT_0125 0.21 +8.1 123,267 + B158DRAFT_0125 0.31 +7.3 123,308 - B158DRAFT_0125 0.37 +7.6 123,322 - B158DRAFT_0125 0.39 +7.5 123,331 - B158DRAFT_0125 0.40 +7.5 123,331 - B158DRAFT_0125 0.40 +7.8 123,331 - B158DRAFT_0125 0.40 +7.9 123,331 - B158DRAFT_0125 0.40 +7.6 123,333 + B158DRAFT_0125 0.41 +7.5 123,333 + B158DRAFT_0125 0.41 +7.4 123,333 + B158DRAFT_0125 0.41 +7.5 123,333 + B158DRAFT_0125 0.41 +7.9 123,341 - B158DRAFT_0125 0.42 +8.1 123,341 - B158DRAFT_0125 0.42 +7.2 123,341 - B158DRAFT_0125 0.42 +7.3 123,348 - B158DRAFT_0125 0.43 +7.6 123,367 + B158DRAFT_0125 0.45 +7.5 123,375 - B158DRAFT_0125 0.46 +7.6 123,384 + B158DRAFT_0125 0.48 +7.6 123,392 - B158DRAFT_0125 0.49 +6.4 123,470 + B158DRAFT_0125 0.60 +7.5 123,478 - B158DRAFT_0125 0.61 +7.6 123,478 - B158DRAFT_0125 0.61 +8.0 123,483 - B158DRAFT_0125 0.62 +7.9 123,498 + B158DRAFT_0125 0.64 +6.9 123,498 + B158DRAFT_0125 0.64 +7.9 123,498 + B158DRAFT_0125 0.64 +7.7 123,498 + B158DRAFT_0125 0.64 +7.4 123,506 - B158DRAFT_0125 0.65 +7.9 123,506 - B158DRAFT_0125 0.65 +7.3 123,518 + B158DRAFT_0125 0.67 +7.4 123,518 + B158DRAFT_0125 0.67 +7.4 123,518 + B158DRAFT_0125 0.67 +7.5 123,518 + B158DRAFT_0125 0.67 +7.9 123,526 - B158DRAFT_0125 0.68 +7.5 123,561 - B158DRAFT_0125 0.73 +7.4 123,694 - +7.2 123,706 + +7.4 123,901 + B158DRAFT_0126 0.30 +7.4 123,941 - B158DRAFT_0126 0.37 +7.5 124,002 + B158DRAFT_0126 0.48 +7.4 124,037 - B158DRAFT_0126 0.54 +7.6 124,047 + B158DRAFT_0126 0.56 +8.0
Or see this region's nucleotide sequence