Experiment: marine broth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0092 and B158DRAFT_0093 are separated by 49 nucleotides B158DRAFT_0093 and B158DRAFT_0094 are separated by 105 nucleotides B158DRAFT_0094 and B158DRAFT_0095 are separated by 12 nucleotides B158DRAFT_0095 and B158DRAFT_0096 are separated by 136 nucleotides
B158DRAFT_0092: B158DRAFT_0092 - hypothetical protein, at 87,238 to 87,447
_0092
B158DRAFT_0093: B158DRAFT_0093 - hypothetical protein, at 87,497 to 87,961
_0093
B158DRAFT_0094: B158DRAFT_0094 - hypothetical protein, at 88,067 to 88,285
_0094
B158DRAFT_0095: B158DRAFT_0095 - apolipoprotein N-acyltransferase, at 88,298 to 89,815
_0095
B158DRAFT_0096: B158DRAFT_0096 - Putative Mg2+ and Co2+ transporter CorC, at 89,952 to 90,809
_0096
Position (kb) 88
89
90 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 87.383 kb on - strand, within B158DRAFT_0092 at 87.395 kb on - strand, within B158DRAFT_0092 at 87.397 kb on - strand, within B158DRAFT_0092 at 87.527 kb on + strand at 87.527 kb on + strand at 87.535 kb on - strand at 87.535 kb on - strand at 87.535 kb on - strand at 87.544 kb on - strand, within B158DRAFT_0093 at 87.650 kb on - strand, within B158DRAFT_0093 at 87.657 kb on - strand, within B158DRAFT_0093 at 87.741 kb on - strand, within B158DRAFT_0093 at 87.798 kb on + strand, within B158DRAFT_0093 at 87.939 kb on + strand at 87.953 kb on - strand at 87.959 kb on - strand at 88.101 kb on - strand, within B158DRAFT_0094 at 88.141 kb on + strand, within B158DRAFT_0094 at 88.172 kb on - strand, within B158DRAFT_0094 at 88.227 kb on - strand, within B158DRAFT_0094 at 88.391 kb on - strand at 88.506 kb on + strand, within B158DRAFT_0095 at 88.552 kb on + strand, within B158DRAFT_0095 at 89.036 kb on - strand, within B158DRAFT_0095 at 89.036 kb on - strand, within B158DRAFT_0095 at 89.036 kb on - strand, within B158DRAFT_0095 at 89.176 kb on + strand, within B158DRAFT_0095 at 89.186 kb on + strand, within B158DRAFT_0095 at 89.186 kb on + strand, within B158DRAFT_0095 at 89.194 kb on - strand, within B158DRAFT_0095 at 89.341 kb on + strand, within B158DRAFT_0095 at 89.343 kb on + strand, within B158DRAFT_0095 at 89.344 kb on - strand, within B158DRAFT_0095 at 89.349 kb on - strand, within B158DRAFT_0095 at 89.349 kb on - strand, within B158DRAFT_0095 at 89.355 kb on + strand, within B158DRAFT_0095 at 89.364 kb on + strand, within B158DRAFT_0095 at 89.367 kb on - strand, within B158DRAFT_0095 at 89.367 kb on - strand, within B158DRAFT_0095 at 89.372 kb on - strand, within B158DRAFT_0095 at 89.486 kb on - strand, within B158DRAFT_0095 at 89.489 kb on + strand, within B158DRAFT_0095 at 89.610 kb on - strand, within B158DRAFT_0095 at 89.661 kb on - strand, within B158DRAFT_0095 at 89.728 kb on + strand at 89.796 kb on + strand at 89.824 kb on + strand at 89.873 kb on + strand at 89.881 kb on - strand at 89.881 kb on - strand at 89.883 kb on + strand at 89.981 kb on + strand at 89.988 kb on - strand at 89.988 kb on - strand at 89.989 kb on - strand at 90.024 kb on - strand at 90.070 kb on + strand, within B158DRAFT_0096 at 90.438 kb on - strand, within B158DRAFT_0096 at 90.687 kb on - strand, within B158DRAFT_0096 at 90.706 kb on + strand, within B158DRAFT_0096
Per-strain Table
Position Strand Gene LocusTag Fraction marine broth remove 87,383 - B158DRAFT_0092 0.69 -1.3 87,395 - B158DRAFT_0092 0.75 -1.0 87,397 - B158DRAFT_0092 0.76 +0.9 87,527 + -0.9 87,527 + -0.4 87,535 - -1.0 87,535 - +0.7 87,535 - -2.0 87,544 - B158DRAFT_0093 0.10 +1.2 87,650 - B158DRAFT_0093 0.33 -1.8 87,657 - B158DRAFT_0093 0.34 -2.0 87,741 - B158DRAFT_0093 0.52 -0.8 87,798 + B158DRAFT_0093 0.65 -1.1 87,939 + -1.7 87,953 - -1.3 87,959 - +0.3 88,101 - B158DRAFT_0094 0.16 +2.2 88,141 + B158DRAFT_0094 0.34 +0.7 88,172 - B158DRAFT_0094 0.48 -0.6 88,227 - B158DRAFT_0094 0.73 -0.9 88,391 - +0.5 88,506 + B158DRAFT_0095 0.14 +1.3 88,552 + B158DRAFT_0095 0.17 -0.0 89,036 - B158DRAFT_0095 0.49 -0.5 89,036 - B158DRAFT_0095 0.49 +0.2 89,036 - B158DRAFT_0095 0.49 +0.2 89,176 + B158DRAFT_0095 0.58 +0.8 89,186 + B158DRAFT_0095 0.58 -0.3 89,186 + B158DRAFT_0095 0.58 +0.2 89,194 - B158DRAFT_0095 0.59 -0.3 89,341 + B158DRAFT_0095 0.69 +0.6 89,343 + B158DRAFT_0095 0.69 +0.3 89,344 - B158DRAFT_0095 0.69 +0.3 89,349 - B158DRAFT_0095 0.69 +1.2 89,349 - B158DRAFT_0095 0.69 +0.5 89,355 + B158DRAFT_0095 0.70 +1.7 89,364 + B158DRAFT_0095 0.70 +1.3 89,367 - B158DRAFT_0095 0.70 -0.1 89,367 - B158DRAFT_0095 0.70 -1.0 89,372 - B158DRAFT_0095 0.71 -0.9 89,486 - B158DRAFT_0095 0.78 +1.0 89,489 + B158DRAFT_0095 0.78 +0.3 89,610 - B158DRAFT_0095 0.86 +0.2 89,661 - B158DRAFT_0095 0.90 +0.5 89,728 + +0.0 89,796 + -0.6 89,824 + +0.7 89,873 + -1.1 89,881 - -0.8 89,881 - -2.1 89,883 + -1.2 89,981 + -0.4 89,988 - +0.8 89,988 - -0.6 89,989 - +1.9 90,024 - +3.1 90,070 + B158DRAFT_0096 0.14 -1.6 90,438 - B158DRAFT_0096 0.57 +0.1 90,687 - B158DRAFT_0096 0.86 -1.2 90,706 + B158DRAFT_0096 0.88 +1.6
Or see this region's nucleotide sequence