Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2393

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2392 and B158DRAFT_2393 are separated by 0 nucleotidesB158DRAFT_2393 and B158DRAFT_2394 are separated by 21 nucleotides B158DRAFT_2392: B158DRAFT_2392 - Uncharacterized low-complexity proteins, at 561,077 to 562,828 _2392 B158DRAFT_2393: B158DRAFT_2393 - hypothetical protein, at 562,829 to 563,716 _2393 B158DRAFT_2394: B158DRAFT_2394 - diguanylate cyclase (GGDEF) domain, at 563,738 to 566,089 _2394 Position (kb) 562 563 564Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 562.102 kb on + strand, within B158DRAFT_2392at 562.110 kb on - strand, within B158DRAFT_2392at 562.113 kb on + strand, within B158DRAFT_2392at 562.113 kb on + strand, within B158DRAFT_2392at 562.113 kb on + strand, within B158DRAFT_2392at 562.113 kb on + strand, within B158DRAFT_2392at 562.113 kb on + strand, within B158DRAFT_2392at 562.113 kb on + strand, within B158DRAFT_2392at 562.121 kb on - strand, within B158DRAFT_2392at 562.121 kb on - strand, within B158DRAFT_2392at 562.121 kb on - strand, within B158DRAFT_2392at 562.180 kb on - strand, within B158DRAFT_2392at 562.180 kb on - strand, within B158DRAFT_2392at 562.251 kb on + strand, within B158DRAFT_2392at 562.259 kb on - strand, within B158DRAFT_2392at 562.349 kb on + strand, within B158DRAFT_2392at 562.349 kb on + strand, within B158DRAFT_2392at 562.357 kb on - strand, within B158DRAFT_2392at 562.440 kb on - strand, within B158DRAFT_2392at 562.440 kb on - strand, within B158DRAFT_2392at 562.478 kb on + strand, within B158DRAFT_2392at 562.478 kb on + strand, within B158DRAFT_2392at 562.478 kb on + strand, within B158DRAFT_2392at 562.486 kb on - strand, within B158DRAFT_2392at 562.486 kb on - strand, within B158DRAFT_2392at 562.486 kb on - strand, within B158DRAFT_2392at 562.486 kb on - strand, within B158DRAFT_2392at 562.488 kb on + strand, within B158DRAFT_2392at 562.488 kb on + strand, within B158DRAFT_2392at 562.508 kb on + strand, within B158DRAFT_2392at 562.558 kb on + strand, within B158DRAFT_2392at 562.558 kb on + strand, within B158DRAFT_2392at 562.566 kb on - strand, within B158DRAFT_2392at 562.599 kb on - strand, within B158DRAFT_2392at 562.658 kb on + strandat 562.658 kb on + strandat 562.658 kb on + strandat 562.666 kb on - strandat 562.804 kb on - strandat 562.807 kb on + strandat 562.966 kb on + strand, within B158DRAFT_2393at 562.979 kb on - strand, within B158DRAFT_2393at 563.053 kb on + strand, within B158DRAFT_2393at 563.053 kb on + strand, within B158DRAFT_2393at 563.053 kb on + strand, within B158DRAFT_2393at 563.053 kb on + strand, within B158DRAFT_2393at 563.061 kb on - strand, within B158DRAFT_2393at 563.302 kb on + strand, within B158DRAFT_2393at 563.310 kb on - strand, within B158DRAFT_2393at 563.350 kb on - strand, within B158DRAFT_2393at 563.390 kb on - strand, within B158DRAFT_2393at 563.390 kb on - strand, within B158DRAFT_2393at 563.432 kb on - strand, within B158DRAFT_2393at 563.453 kb on - strand, within B158DRAFT_2393at 563.453 kb on - strand, within B158DRAFT_2393at 563.455 kb on + strand, within B158DRAFT_2393at 563.505 kb on - strand, within B158DRAFT_2393at 563.522 kb on + strand, within B158DRAFT_2393at 563.537 kb on + strand, within B158DRAFT_2393at 563.537 kb on + strand, within B158DRAFT_2393at 563.545 kb on - strand, within B158DRAFT_2393at 563.560 kb on + strand, within B158DRAFT_2393at 563.570 kb on - strand, within B158DRAFT_2393at 563.579 kb on + strand, within B158DRAFT_2393at 563.677 kb on + strandat 563.677 kb on + strandat 563.685 kb on - strandat 563.685 kb on - strandat 563.685 kb on - strandat 563.685 kb on - strandat 563.685 kb on - strandat 563.685 kb on - strandat 563.720 kb on - strandat 563.841 kb on + strandat 563.953 kb on + strandat 564.016 kb on + strand, within B158DRAFT_2394at 564.019 kb on - strand, within B158DRAFT_2394at 564.025 kb on + strand, within B158DRAFT_2394at 564.031 kb on + strand, within B158DRAFT_2394at 564.165 kb on + strand, within B158DRAFT_2394at 564.275 kb on + strand, within B158DRAFT_2394at 564.275 kb on + strand, within B158DRAFT_2394at 564.275 kb on + strand, within B158DRAFT_2394at 564.275 kb on + strand, within B158DRAFT_2394at 564.283 kb on - strand, within B158DRAFT_2394at 564.544 kb on + strand, within B158DRAFT_2394

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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562,102 + B158DRAFT_2392 0.59 -2.0
562,110 - B158DRAFT_2392 0.59 +1.8
562,113 + B158DRAFT_2392 0.59 +0.9
562,113 + B158DRAFT_2392 0.59 +1.3
562,113 + B158DRAFT_2392 0.59 +1.8
562,113 + B158DRAFT_2392 0.59 +2.2
562,113 + B158DRAFT_2392 0.59 -0.4
562,113 + B158DRAFT_2392 0.59 +1.1
562,121 - B158DRAFT_2392 0.60 +1.0
562,121 - B158DRAFT_2392 0.60 +0.9
562,121 - B158DRAFT_2392 0.60 +0.5
562,180 - B158DRAFT_2392 0.63 +2.0
562,180 - B158DRAFT_2392 0.63 +1.0
562,251 + B158DRAFT_2392 0.67 -0.1
562,259 - B158DRAFT_2392 0.67 +1.3
562,349 + B158DRAFT_2392 0.73 +1.1
562,349 + B158DRAFT_2392 0.73 +1.7
562,357 - B158DRAFT_2392 0.73 +1.4
562,440 - B158DRAFT_2392 0.78 -0.5
562,440 - B158DRAFT_2392 0.78 +0.8
562,478 + B158DRAFT_2392 0.80 -0.5
562,478 + B158DRAFT_2392 0.80 -0.2
562,478 + B158DRAFT_2392 0.80 +0.7
562,486 - B158DRAFT_2392 0.80 +0.1
562,486 - B158DRAFT_2392 0.80 -0.3
562,486 - B158DRAFT_2392 0.80 -1.3
562,486 - B158DRAFT_2392 0.80 +2.0
562,488 + B158DRAFT_2392 0.81 -0.6
562,488 + B158DRAFT_2392 0.81 +0.5
562,508 + B158DRAFT_2392 0.82 +0.7
562,558 + B158DRAFT_2392 0.85 +0.3
562,558 + B158DRAFT_2392 0.85 -1.1
562,566 - B158DRAFT_2392 0.85 +1.2
562,599 - B158DRAFT_2392 0.87 +1.5
562,658 + +1.5
562,658 + +2.8
562,658 + +0.8
562,666 - +0.8
562,804 - +0.1
562,807 + +0.1
562,966 + B158DRAFT_2393 0.15 -0.3
562,979 - B158DRAFT_2393 0.17 +0.8
563,053 + B158DRAFT_2393 0.25 +0.5
563,053 + B158DRAFT_2393 0.25 +0.2
563,053 + B158DRAFT_2393 0.25 +0.8
563,053 + B158DRAFT_2393 0.25 +2.0
563,061 - B158DRAFT_2393 0.26 -0.1
563,302 + B158DRAFT_2393 0.53 -1.8
563,310 - B158DRAFT_2393 0.54 -1.8
563,350 - B158DRAFT_2393 0.59 -1.2
563,390 - B158DRAFT_2393 0.63 +0.6
563,390 - B158DRAFT_2393 0.63 -0.7
563,432 - B158DRAFT_2393 0.68 -1.0
563,453 - B158DRAFT_2393 0.70 -0.8
563,453 - B158DRAFT_2393 0.70 +1.5
563,455 + B158DRAFT_2393 0.70 -0.1
563,505 - B158DRAFT_2393 0.76 -0.4
563,522 + B158DRAFT_2393 0.78 +0.7
563,537 + B158DRAFT_2393 0.80 -2.9
563,537 + B158DRAFT_2393 0.80 +0.3
563,545 - B158DRAFT_2393 0.81 -0.4
563,560 + B158DRAFT_2393 0.82 -0.2
563,570 - B158DRAFT_2393 0.83 +0.3
563,579 + B158DRAFT_2393 0.84 +0.6
563,677 + -0.7
563,677 + -1.5
563,685 - -1.0
563,685 - -0.7
563,685 - -0.9
563,685 - +1.1
563,685 - -0.2
563,685 - +1.6
563,720 - +0.9
563,841 + +1.4
563,953 + -0.5
564,016 + B158DRAFT_2394 0.12 +0.5
564,019 - B158DRAFT_2394 0.12 -0.4
564,025 + B158DRAFT_2394 0.12 +0.3
564,031 + B158DRAFT_2394 0.12 -1.0
564,165 + B158DRAFT_2394 0.18 +1.7
564,275 + B158DRAFT_2394 0.23 +0.7
564,275 + B158DRAFT_2394 0.23 +1.5
564,275 + B158DRAFT_2394 0.23 +0.0
564,275 + B158DRAFT_2394 0.23 +0.5
564,283 - B158DRAFT_2394 0.23 -0.2
564,544 + B158DRAFT_2394 0.34 +0.1

Or see this region's nucleotide sequence