Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2207

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2206 and B158DRAFT_2207 are separated by 29 nucleotidesB158DRAFT_2207 and B158DRAFT_2208 are separated by 379 nucleotides B158DRAFT_2206: B158DRAFT_2206 - DNA-binding winged-HTH domains, at 351,676 to 353,898 _2206 B158DRAFT_2207: B158DRAFT_2207 - hypothetical protein, at 353,928 to 354,125 _2207 B158DRAFT_2208: B158DRAFT_2208 - transcriptional regulator, GntR family, at 354,505 to 355,227 _2208 Position (kb) 353 354 355Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 353.014 kb on + strand, within B158DRAFT_2206at 353.014 kb on + strand, within B158DRAFT_2206at 353.073 kb on - strand, within B158DRAFT_2206at 353.119 kb on + strand, within B158DRAFT_2206at 353.204 kb on + strand, within B158DRAFT_2206at 353.212 kb on - strand, within B158DRAFT_2206at 353.212 kb on - strand, within B158DRAFT_2206at 353.212 kb on - strand, within B158DRAFT_2206at 353.215 kb on + strand, within B158DRAFT_2206at 353.215 kb on + strand, within B158DRAFT_2206at 353.215 kb on + strand, within B158DRAFT_2206at 353.223 kb on - strand, within B158DRAFT_2206at 353.223 kb on - strand, within B158DRAFT_2206at 353.311 kb on - strand, within B158DRAFT_2206at 353.313 kb on - strand, within B158DRAFT_2206at 353.313 kb on - strand, within B158DRAFT_2206at 353.421 kb on + strand, within B158DRAFT_2206at 353.456 kb on + strand, within B158DRAFT_2206at 353.542 kb on - strand, within B158DRAFT_2206at 353.598 kb on + strand, within B158DRAFT_2206at 353.606 kb on - strand, within B158DRAFT_2206at 353.606 kb on - strand, within B158DRAFT_2206at 353.619 kb on - strand, within B158DRAFT_2206at 353.642 kb on - strand, within B158DRAFT_2206at 353.663 kb on + strand, within B158DRAFT_2206at 353.671 kb on - strand, within B158DRAFT_2206at 353.677 kb on + strandat 353.679 kb on - strandat 353.687 kb on + strandat 353.687 kb on + strandat 353.687 kb on + strandat 353.695 kb on - strandat 353.739 kb on + strandat 353.753 kb on + strandat 353.777 kb on - strandat 353.812 kb on - strandat 353.892 kb on + strandat 353.892 kb on + strandat 353.892 kb on + strandat 353.900 kb on - strandat 353.900 kb on - strandat 353.900 kb on - strandat 353.915 kb on - strandat 353.915 kb on - strandat 353.963 kb on + strand, within B158DRAFT_2207at 353.975 kb on + strand, within B158DRAFT_2207at 353.975 kb on + strand, within B158DRAFT_2207at 353.983 kb on - strand, within B158DRAFT_2207at 353.983 kb on - strand, within B158DRAFT_2207at 354.014 kb on + strand, within B158DRAFT_2207at 354.024 kb on + strand, within B158DRAFT_2207at 354.034 kb on + strand, within B158DRAFT_2207at 354.097 kb on + strand, within B158DRAFT_2207at 354.187 kb on + strandat 354.205 kb on + strandat 354.213 kb on - strandat 354.278 kb on + strandat 354.283 kb on + strandat 354.291 kb on - strandat 354.291 kb on - strandat 354.313 kb on + strandat 354.336 kb on + strandat 354.336 kb on + strandat 354.336 kb on + strandat 354.339 kb on - strandat 354.344 kb on - strandat 354.504 kb on - strandat 354.515 kb on - strandat 354.531 kb on - strandat 354.746 kb on + strand, within B158DRAFT_2208at 354.754 kb on - strand, within B158DRAFT_2208at 354.764 kb on - strand, within B158DRAFT_2208at 354.799 kb on - strand, within B158DRAFT_2208at 354.819 kb on + strand, within B158DRAFT_2208at 354.943 kb on + strand, within B158DRAFT_2208at 354.996 kb on - strand, within B158DRAFT_2208at 355.065 kb on - strand, within B158DRAFT_2208at 355.118 kb on - strand, within B158DRAFT_2208at 355.119 kb on - strand, within B158DRAFT_2208at 355.124 kb on - strand, within B158DRAFT_2208at 355.124 kb on - strand, within B158DRAFT_2208

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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353,014 + B158DRAFT_2206 0.60 -0.9
353,014 + B158DRAFT_2206 0.60 -1.4
353,073 - B158DRAFT_2206 0.63 +0.5
353,119 + B158DRAFT_2206 0.65 -1.0
353,204 + B158DRAFT_2206 0.69 -3.0
353,212 - B158DRAFT_2206 0.69 -0.8
353,212 - B158DRAFT_2206 0.69 +1.9
353,212 - B158DRAFT_2206 0.69 -1.1
353,215 + B158DRAFT_2206 0.69 +0.3
353,215 + B158DRAFT_2206 0.69 +1.2
353,215 + B158DRAFT_2206 0.69 +0.4
353,223 - B158DRAFT_2206 0.70 +0.2
353,223 - B158DRAFT_2206 0.70 -1.6
353,311 - B158DRAFT_2206 0.74 -1.3
353,313 - B158DRAFT_2206 0.74 +0.3
353,313 - B158DRAFT_2206 0.74 +0.1
353,421 + B158DRAFT_2206 0.78 -1.9
353,456 + B158DRAFT_2206 0.80 +0.0
353,542 - B158DRAFT_2206 0.84 -0.3
353,598 + B158DRAFT_2206 0.86 -1.0
353,606 - B158DRAFT_2206 0.87 -1.2
353,606 - B158DRAFT_2206 0.87 -0.7
353,619 - B158DRAFT_2206 0.87 -1.1
353,642 - B158DRAFT_2206 0.88 -1.6
353,663 + B158DRAFT_2206 0.89 -0.8
353,671 - B158DRAFT_2206 0.90 +1.4
353,677 + -2.1
353,679 - -0.8
353,687 + -2.0
353,687 + -1.4
353,687 + -0.4
353,695 - +0.8
353,739 + -1.0
353,753 + +1.6
353,777 - -0.3
353,812 - -0.1
353,892 + -0.1
353,892 + +1.7
353,892 + -0.9
353,900 - -2.6
353,900 - -0.3
353,900 - -1.5
353,915 - -0.2
353,915 - +1.3
353,963 + B158DRAFT_2207 0.18 +0.6
353,975 + B158DRAFT_2207 0.24 -0.7
353,975 + B158DRAFT_2207 0.24 -2.1
353,983 - B158DRAFT_2207 0.28 +0.8
353,983 - B158DRAFT_2207 0.28 -0.8
354,014 + B158DRAFT_2207 0.43 -1.5
354,024 + B158DRAFT_2207 0.48 -0.4
354,034 + B158DRAFT_2207 0.54 -1.0
354,097 + B158DRAFT_2207 0.85 -0.5
354,187 + -0.9
354,205 + -2.4
354,213 - -2.8
354,278 + -1.3
354,283 + -0.7
354,291 - -0.3
354,291 - +1.3
354,313 + -0.2
354,336 + -1.7
354,336 + -0.4
354,336 + -0.6
354,339 - -2.6
354,344 - -1.5
354,504 - -1.8
354,515 - -1.0
354,531 - -0.4
354,746 + B158DRAFT_2208 0.33 +0.3
354,754 - B158DRAFT_2208 0.34 -3.6
354,764 - B158DRAFT_2208 0.36 -2.0
354,799 - B158DRAFT_2208 0.41 -1.2
354,819 + B158DRAFT_2208 0.43 -2.3
354,943 + B158DRAFT_2208 0.61 -2.2
354,996 - B158DRAFT_2208 0.68 -3.8
355,065 - B158DRAFT_2208 0.77 +0.5
355,118 - B158DRAFT_2208 0.85 -2.1
355,119 - B158DRAFT_2208 0.85 -2.4
355,124 - B158DRAFT_2208 0.86 -3.9
355,124 - B158DRAFT_2208 0.86 +0.0

Or see this region's nucleotide sequence