Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2206

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2205 and B158DRAFT_2206 are separated by 201 nucleotidesB158DRAFT_2206 and B158DRAFT_2207 are separated by 29 nucleotidesB158DRAFT_2207 and B158DRAFT_2208 are separated by 379 nucleotides B158DRAFT_2205: B158DRAFT_2205 - hypothetical protein, at 349,396 to 351,474 _2205 B158DRAFT_2206: B158DRAFT_2206 - DNA-binding winged-HTH domains, at 351,676 to 353,898 _2206 B158DRAFT_2207: B158DRAFT_2207 - hypothetical protein, at 353,928 to 354,125 _2207 B158DRAFT_2208: B158DRAFT_2208 - transcriptional regulator, GntR family, at 354,505 to 355,227 _2208 Position (kb) 351 352 353 354Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 350.702 kb on - strand, within B158DRAFT_2205at 350.702 kb on - strand, within B158DRAFT_2205at 350.725 kb on - strand, within B158DRAFT_2205at 350.754 kb on + strand, within B158DRAFT_2205at 350.778 kb on - strand, within B158DRAFT_2205at 350.798 kb on - strand, within B158DRAFT_2205at 350.798 kb on - strand, within B158DRAFT_2205at 350.798 kb on - strand, within B158DRAFT_2205at 350.867 kb on + strand, within B158DRAFT_2205at 350.877 kb on - strand, within B158DRAFT_2205at 350.941 kb on + strand, within B158DRAFT_2205at 350.951 kb on + strand, within B158DRAFT_2205at 350.951 kb on + strand, within B158DRAFT_2205at 350.951 kb on + strand, within B158DRAFT_2205at 350.958 kb on + strand, within B158DRAFT_2205at 350.958 kb on + strand, within B158DRAFT_2205at 350.958 kb on + strand, within B158DRAFT_2205at 350.959 kb on - strand, within B158DRAFT_2205at 350.966 kb on - strand, within B158DRAFT_2205at 350.966 kb on - strand, within B158DRAFT_2205at 350.966 kb on - strand, within B158DRAFT_2205at 351.024 kb on - strand, within B158DRAFT_2205at 351.071 kb on + strand, within B158DRAFT_2205at 351.079 kb on + strand, within B158DRAFT_2205at 351.100 kb on + strand, within B158DRAFT_2205at 351.153 kb on + strand, within B158DRAFT_2205at 351.156 kb on + strand, within B158DRAFT_2205at 351.181 kb on + strand, within B158DRAFT_2205at 351.186 kb on + strand, within B158DRAFT_2205at 351.189 kb on - strand, within B158DRAFT_2205at 351.189 kb on - strand, within B158DRAFT_2205at 351.189 kb on - strand, within B158DRAFT_2205at 351.189 kb on - strand, within B158DRAFT_2205at 351.211 kb on + strand, within B158DRAFT_2205at 351.211 kb on + strand, within B158DRAFT_2205at 351.211 kb on + strand, within B158DRAFT_2205at 351.219 kb on - strand, within B158DRAFT_2205at 351.219 kb on - strand, within B158DRAFT_2205at 351.227 kb on - strand, within B158DRAFT_2205at 351.259 kb on - strand, within B158DRAFT_2205at 351.265 kb on + strand, within B158DRAFT_2205at 351.289 kb on - strandat 351.290 kb on - strandat 351.339 kb on + strandat 351.366 kb on - strandat 351.493 kb on - strandat 351.501 kb on + strandat 351.539 kb on - strandat 351.666 kb on + strandat 351.666 kb on + strandat 351.666 kb on + strandat 351.666 kb on + strandat 351.666 kb on + strandat 351.666 kb on + strandat 351.674 kb on - strandat 351.674 kb on - strandat 351.674 kb on - strandat 351.674 kb on - strandat 351.750 kb on + strandat 351.750 kb on + strandat 351.758 kb on - strandat 351.763 kb on - strandat 351.770 kb on - strandat 351.770 kb on - strandat 351.799 kb on + strandat 351.799 kb on + strandat 351.801 kb on + strandat 351.855 kb on + strandat 351.875 kb on - strandat 351.963 kb on + strand, within B158DRAFT_2206at 352.015 kb on + strand, within B158DRAFT_2206at 352.023 kb on - strand, within B158DRAFT_2206at 352.023 kb on - strand, within B158DRAFT_2206at 352.084 kb on + strand, within B158DRAFT_2206at 352.092 kb on - strand, within B158DRAFT_2206at 352.096 kb on + strand, within B158DRAFT_2206at 352.122 kb on + strand, within B158DRAFT_2206at 352.338 kb on - strand, within B158DRAFT_2206at 352.438 kb on - strand, within B158DRAFT_2206at 352.483 kb on + strand, within B158DRAFT_2206at 352.520 kb on - strand, within B158DRAFT_2206at 352.580 kb on + strand, within B158DRAFT_2206at 352.580 kb on - strand, within B158DRAFT_2206at 352.580 kb on - strand, within B158DRAFT_2206at 352.588 kb on - strand, within B158DRAFT_2206at 352.622 kb on - strand, within B158DRAFT_2206at 352.622 kb on - strand, within B158DRAFT_2206at 352.711 kb on - strand, within B158DRAFT_2206at 352.711 kb on - strand, within B158DRAFT_2206at 352.711 kb on - strand, within B158DRAFT_2206at 352.745 kb on - strand, within B158DRAFT_2206at 352.747 kb on + strand, within B158DRAFT_2206at 352.783 kb on - strand, within B158DRAFT_2206at 352.898 kb on + strand, within B158DRAFT_2206at 352.906 kb on - strand, within B158DRAFT_2206at 352.906 kb on - strand, within B158DRAFT_2206at 352.906 kb on - strand, within B158DRAFT_2206at 352.910 kb on + strand, within B158DRAFT_2206at 352.918 kb on - strand, within B158DRAFT_2206at 353.014 kb on + strand, within B158DRAFT_2206at 353.014 kb on + strand, within B158DRAFT_2206at 353.073 kb on - strand, within B158DRAFT_2206at 353.119 kb on + strand, within B158DRAFT_2206at 353.204 kb on + strand, within B158DRAFT_2206at 353.212 kb on - strand, within B158DRAFT_2206at 353.212 kb on - strand, within B158DRAFT_2206at 353.212 kb on - strand, within B158DRAFT_2206at 353.215 kb on + strand, within B158DRAFT_2206at 353.215 kb on + strand, within B158DRAFT_2206at 353.215 kb on + strand, within B158DRAFT_2206at 353.223 kb on - strand, within B158DRAFT_2206at 353.223 kb on - strand, within B158DRAFT_2206at 353.311 kb on - strand, within B158DRAFT_2206at 353.313 kb on - strand, within B158DRAFT_2206at 353.313 kb on - strand, within B158DRAFT_2206at 353.421 kb on + strand, within B158DRAFT_2206at 353.456 kb on + strand, within B158DRAFT_2206at 353.542 kb on - strand, within B158DRAFT_2206at 353.598 kb on + strand, within B158DRAFT_2206at 353.606 kb on - strand, within B158DRAFT_2206at 353.606 kb on - strand, within B158DRAFT_2206at 353.619 kb on - strand, within B158DRAFT_2206at 353.642 kb on - strand, within B158DRAFT_2206at 353.663 kb on + strand, within B158DRAFT_2206at 353.671 kb on - strand, within B158DRAFT_2206at 353.677 kb on + strandat 353.679 kb on - strandat 353.687 kb on + strandat 353.687 kb on + strandat 353.687 kb on + strandat 353.695 kb on - strandat 353.739 kb on + strandat 353.753 kb on + strandat 353.777 kb on - strandat 353.812 kb on - strandat 353.892 kb on + strandat 353.892 kb on + strandat 353.892 kb on + strandat 353.900 kb on - strandat 353.900 kb on - strandat 353.900 kb on - strandat 353.915 kb on - strandat 353.915 kb on - strandat 353.963 kb on + strand, within B158DRAFT_2207at 353.975 kb on + strand, within B158DRAFT_2207at 353.975 kb on + strand, within B158DRAFT_2207at 353.983 kb on - strand, within B158DRAFT_2207at 353.983 kb on - strand, within B158DRAFT_2207at 354.014 kb on + strand, within B158DRAFT_2207at 354.024 kb on + strand, within B158DRAFT_2207at 354.034 kb on + strand, within B158DRAFT_2207at 354.097 kb on + strand, within B158DRAFT_2207at 354.187 kb on + strandat 354.205 kb on + strandat 354.213 kb on - strandat 354.278 kb on + strandat 354.283 kb on + strandat 354.291 kb on - strandat 354.291 kb on - strandat 354.313 kb on + strandat 354.336 kb on + strandat 354.336 kb on + strandat 354.336 kb on + strandat 354.339 kb on - strandat 354.344 kb on - strandat 354.504 kb on - strandat 354.515 kb on - strandat 354.531 kb on - strandat 354.746 kb on + strand, within B158DRAFT_2208at 354.754 kb on - strand, within B158DRAFT_2208at 354.764 kb on - strand, within B158DRAFT_2208at 354.799 kb on - strand, within B158DRAFT_2208at 354.819 kb on + strand, within B158DRAFT_2208

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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350,702 - B158DRAFT_2205 0.63 -1.6
350,702 - B158DRAFT_2205 0.63 +0.1
350,725 - B158DRAFT_2205 0.64 -2.1
350,754 + B158DRAFT_2205 0.65 +3.0
350,778 - B158DRAFT_2205 0.66 -1.0
350,798 - B158DRAFT_2205 0.67 -2.2
350,798 - B158DRAFT_2205 0.67 -3.4
350,798 - B158DRAFT_2205 0.67 +2.9
350,867 + B158DRAFT_2205 0.71 +0.5
350,877 - B158DRAFT_2205 0.71 +0.0
350,941 + B158DRAFT_2205 0.74 +0.1
350,951 + B158DRAFT_2205 0.75 +0.7
350,951 + B158DRAFT_2205 0.75 -1.3
350,951 + B158DRAFT_2205 0.75 -1.2
350,958 + B158DRAFT_2205 0.75 -1.4
350,958 + B158DRAFT_2205 0.75 -0.9
350,958 + B158DRAFT_2205 0.75 -1.1
350,959 - B158DRAFT_2205 0.75 -1.5
350,966 - B158DRAFT_2205 0.76 -0.5
350,966 - B158DRAFT_2205 0.76 -0.1
350,966 - B158DRAFT_2205 0.76 -1.3
351,024 - B158DRAFT_2205 0.78 -0.1
351,071 + B158DRAFT_2205 0.81 -2.1
351,079 + B158DRAFT_2205 0.81 -0.8
351,100 + B158DRAFT_2205 0.82 -0.6
351,153 + B158DRAFT_2205 0.85 +4.6
351,156 + B158DRAFT_2205 0.85 -3.0
351,181 + B158DRAFT_2205 0.86 +0.7
351,186 + B158DRAFT_2205 0.86 -0.1
351,189 - B158DRAFT_2205 0.86 -0.2
351,189 - B158DRAFT_2205 0.86 -0.9
351,189 - B158DRAFT_2205 0.86 +1.5
351,189 - B158DRAFT_2205 0.86 +1.8
351,211 + B158DRAFT_2205 0.87 -0.3
351,211 + B158DRAFT_2205 0.87 -1.4
351,211 + B158DRAFT_2205 0.87 -0.4
351,219 - B158DRAFT_2205 0.88 -0.7
351,219 - B158DRAFT_2205 0.88 -0.2
351,227 - B158DRAFT_2205 0.88 -0.3
351,259 - B158DRAFT_2205 0.90 +0.1
351,265 + B158DRAFT_2205 0.90 -1.5
351,289 - +1.3
351,290 - +0.0
351,339 + +1.4
351,366 - -0.6
351,493 - -0.0
351,501 + -2.8
351,539 - +0.1
351,666 + +0.4
351,666 + -0.2
351,666 + +0.3
351,666 + -0.8
351,666 + -0.7
351,666 + +1.2
351,674 - -0.3
351,674 - -0.3
351,674 - +0.7
351,674 - -0.3
351,750 + -1.4
351,750 + -1.6
351,758 - -0.5
351,763 - +1.1
351,770 - -0.2
351,770 - +0.4
351,799 + +1.1
351,799 + -0.5
351,801 + -1.3
351,855 + -2.7
351,875 - -1.2
351,963 + B158DRAFT_2206 0.13 -2.1
352,015 + B158DRAFT_2206 0.15 -1.3
352,023 - B158DRAFT_2206 0.16 -1.2
352,023 - B158DRAFT_2206 0.16 -0.8
352,084 + B158DRAFT_2206 0.18 +0.6
352,092 - B158DRAFT_2206 0.19 -2.4
352,096 + B158DRAFT_2206 0.19 -1.3
352,122 + B158DRAFT_2206 0.20 -1.8
352,338 - B158DRAFT_2206 0.30 -1.1
352,438 - B158DRAFT_2206 0.34 -2.0
352,483 + B158DRAFT_2206 0.36 -1.4
352,520 - B158DRAFT_2206 0.38 -0.6
352,580 + B158DRAFT_2206 0.41 -0.8
352,580 - B158DRAFT_2206 0.41 -0.4
352,580 - B158DRAFT_2206 0.41 -3.0
352,588 - B158DRAFT_2206 0.41 +1.0
352,622 - B158DRAFT_2206 0.43 -0.3
352,622 - B158DRAFT_2206 0.43 -1.9
352,711 - B158DRAFT_2206 0.47 -1.9
352,711 - B158DRAFT_2206 0.47 -0.2
352,711 - B158DRAFT_2206 0.47 -0.1
352,745 - B158DRAFT_2206 0.48 -0.3
352,747 + B158DRAFT_2206 0.48 +1.7
352,783 - B158DRAFT_2206 0.50 -0.5
352,898 + B158DRAFT_2206 0.55 -0.9
352,906 - B158DRAFT_2206 0.55 -0.2
352,906 - B158DRAFT_2206 0.55 -0.8
352,906 - B158DRAFT_2206 0.55 -2.6
352,910 + B158DRAFT_2206 0.56 -0.2
352,918 - B158DRAFT_2206 0.56 -0.9
353,014 + B158DRAFT_2206 0.60 -0.9
353,014 + B158DRAFT_2206 0.60 -1.4
353,073 - B158DRAFT_2206 0.63 +0.5
353,119 + B158DRAFT_2206 0.65 -1.0
353,204 + B158DRAFT_2206 0.69 -3.0
353,212 - B158DRAFT_2206 0.69 -0.8
353,212 - B158DRAFT_2206 0.69 +1.9
353,212 - B158DRAFT_2206 0.69 -1.1
353,215 + B158DRAFT_2206 0.69 +0.3
353,215 + B158DRAFT_2206 0.69 +1.2
353,215 + B158DRAFT_2206 0.69 +0.4
353,223 - B158DRAFT_2206 0.70 +0.2
353,223 - B158DRAFT_2206 0.70 -1.6
353,311 - B158DRAFT_2206 0.74 -1.3
353,313 - B158DRAFT_2206 0.74 +0.3
353,313 - B158DRAFT_2206 0.74 +0.1
353,421 + B158DRAFT_2206 0.78 -1.9
353,456 + B158DRAFT_2206 0.80 +0.0
353,542 - B158DRAFT_2206 0.84 -0.3
353,598 + B158DRAFT_2206 0.86 -1.0
353,606 - B158DRAFT_2206 0.87 -1.2
353,606 - B158DRAFT_2206 0.87 -0.7
353,619 - B158DRAFT_2206 0.87 -1.1
353,642 - B158DRAFT_2206 0.88 -1.6
353,663 + B158DRAFT_2206 0.89 -0.8
353,671 - B158DRAFT_2206 0.90 +1.4
353,677 + -2.1
353,679 - -0.8
353,687 + -2.0
353,687 + -1.4
353,687 + -0.4
353,695 - +0.8
353,739 + -1.0
353,753 + +1.6
353,777 - -0.3
353,812 - -0.1
353,892 + -0.1
353,892 + +1.7
353,892 + -0.9
353,900 - -2.6
353,900 - -0.3
353,900 - -1.5
353,915 - -0.2
353,915 - +1.3
353,963 + B158DRAFT_2207 0.18 +0.6
353,975 + B158DRAFT_2207 0.24 -0.7
353,975 + B158DRAFT_2207 0.24 -2.1
353,983 - B158DRAFT_2207 0.28 +0.8
353,983 - B158DRAFT_2207 0.28 -0.8
354,014 + B158DRAFT_2207 0.43 -1.5
354,024 + B158DRAFT_2207 0.48 -0.4
354,034 + B158DRAFT_2207 0.54 -1.0
354,097 + B158DRAFT_2207 0.85 -0.5
354,187 + -0.9
354,205 + -2.4
354,213 - -2.8
354,278 + -1.3
354,283 + -0.7
354,291 - -0.3
354,291 - +1.3
354,313 + -0.2
354,336 + -1.7
354,336 + -0.4
354,336 + -0.6
354,339 - -2.6
354,344 - -1.5
354,504 - -1.8
354,515 - -1.0
354,531 - -0.4
354,746 + B158DRAFT_2208 0.33 +0.3
354,754 - B158DRAFT_2208 0.34 -3.6
354,764 - B158DRAFT_2208 0.36 -2.0
354,799 - B158DRAFT_2208 0.41 -1.2
354,819 + B158DRAFT_2208 0.43 -2.3

Or see this region's nucleotide sequence