Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2095

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2093 and B158DRAFT_2094 are separated by 103 nucleotidesB158DRAFT_2094 and B158DRAFT_2095 are separated by 2 nucleotidesB158DRAFT_2095 and B158DRAFT_2096 are separated by 30 nucleotidesB158DRAFT_2096 and B158DRAFT_2097 are separated by 70 nucleotides B158DRAFT_2093: B158DRAFT_2093 - hypothetical protein, at 230,075 to 230,389 _2093 B158DRAFT_2094: B158DRAFT_2094 - Predicted hydrolase of the alpha/beta superfamily, at 230,493 to 231,164 _2094 B158DRAFT_2095: B158DRAFT_2095 - Predicted ATPase, at 231,167 to 232,270 _2095 B158DRAFT_2096: B158DRAFT_2096 - hypothetical protein, at 232,301 to 233,146 _2096 B158DRAFT_2097: B158DRAFT_2097 - Bacterial nucleoid DNA-binding protein, at 233,217 to 233,558 _2097 Position (kb) 231 232 233Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 230.293 kb on + strand, within B158DRAFT_2093at 230.301 kb on - strand, within B158DRAFT_2093at 230.391 kb on - strandat 230.566 kb on - strand, within B158DRAFT_2094at 230.577 kb on - strand, within B158DRAFT_2094at 230.597 kb on - strand, within B158DRAFT_2094at 230.597 kb on - strand, within B158DRAFT_2094at 230.597 kb on - strand, within B158DRAFT_2094at 230.684 kb on + strand, within B158DRAFT_2094at 230.702 kb on - strand, within B158DRAFT_2094at 230.749 kb on - strand, within B158DRAFT_2094at 230.750 kb on - strand, within B158DRAFT_2094at 230.756 kb on + strand, within B158DRAFT_2094at 230.756 kb on + strand, within B158DRAFT_2094at 230.756 kb on + strand, within B158DRAFT_2094at 230.756 kb on + strand, within B158DRAFT_2094at 230.764 kb on - strand, within B158DRAFT_2094at 230.764 kb on - strand, within B158DRAFT_2094at 230.905 kb on + strand, within B158DRAFT_2094at 230.905 kb on + strand, within B158DRAFT_2094at 230.905 kb on + strand, within B158DRAFT_2094at 230.905 kb on + strand, within B158DRAFT_2094at 230.905 kb on + strand, within B158DRAFT_2094at 230.905 kb on + strand, within B158DRAFT_2094at 230.913 kb on - strand, within B158DRAFT_2094at 230.965 kb on + strand, within B158DRAFT_2094at 230.965 kb on + strand, within B158DRAFT_2094at 230.965 kb on + strand, within B158DRAFT_2094at 230.965 kb on + strand, within B158DRAFT_2094at 230.965 kb on + strand, within B158DRAFT_2094at 230.965 kb on + strand, within B158DRAFT_2094at 230.973 kb on - strand, within B158DRAFT_2094at 230.973 kb on - strand, within B158DRAFT_2094at 231.044 kb on + strand, within B158DRAFT_2094at 231.052 kb on - strand, within B158DRAFT_2094at 231.067 kb on + strand, within B158DRAFT_2094at 231.217 kb on - strandat 231.234 kb on + strandat 231.234 kb on + strandat 231.234 kb on + strandat 231.244 kb on + strandat 231.244 kb on + strandat 231.252 kb on - strandat 231.252 kb on - strandat 231.252 kb on - strandat 231.258 kb on + strandat 231.279 kb on - strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.292 kb on - strand, within B158DRAFT_2095at 231.306 kb on - strand, within B158DRAFT_2095at 231.322 kb on + strand, within B158DRAFT_2095at 231.339 kb on + strand, within B158DRAFT_2095at 231.347 kb on - strand, within B158DRAFT_2095at 231.380 kb on + strand, within B158DRAFT_2095at 231.380 kb on + strand, within B158DRAFT_2095at 231.388 kb on - strand, within B158DRAFT_2095at 231.388 kb on - strand, within B158DRAFT_2095at 231.397 kb on + strand, within B158DRAFT_2095at 231.405 kb on - strand, within B158DRAFT_2095at 231.440 kb on + strand, within B158DRAFT_2095at 231.498 kb on - strand, within B158DRAFT_2095at 231.575 kb on - strand, within B158DRAFT_2095at 231.591 kb on + strand, within B158DRAFT_2095at 231.663 kb on - strand, within B158DRAFT_2095at 231.898 kb on - strand, within B158DRAFT_2095at 231.935 kb on + strand, within B158DRAFT_2095at 232.008 kb on + strand, within B158DRAFT_2095at 232.008 kb on + strand, within B158DRAFT_2095at 232.016 kb on - strand, within B158DRAFT_2095at 232.045 kb on - strand, within B158DRAFT_2095at 232.166 kb on - strandat 232.184 kb on + strandat 232.198 kb on - strandat 232.249 kb on + strandat 232.273 kb on - strandat 232.283 kb on - strandat 232.292 kb on + strandat 232.311 kb on + strandat 232.312 kb on - strandat 232.319 kb on - strandat 232.319 kb on - strandat 232.319 kb on - strandat 232.335 kb on + strandat 232.433 kb on + strand, within B158DRAFT_2096at 232.441 kb on + strand, within B158DRAFT_2096at 232.448 kb on - strand, within B158DRAFT_2096at 232.484 kb on + strand, within B158DRAFT_2096at 232.553 kb on - strand, within B158DRAFT_2096at 232.575 kb on + strand, within B158DRAFT_2096at 232.616 kb on + strand, within B158DRAFT_2096at 232.648 kb on + strand, within B158DRAFT_2096at 232.741 kb on + strand, within B158DRAFT_2096at 232.807 kb on - strand, within B158DRAFT_2096at 232.864 kb on + strand, within B158DRAFT_2096at 232.872 kb on - strand, within B158DRAFT_2096at 232.886 kb on + strand, within B158DRAFT_2096at 232.900 kb on + strand, within B158DRAFT_2096at 232.900 kb on + strand, within B158DRAFT_2096at 232.908 kb on - strand, within B158DRAFT_2096at 232.908 kb on - strand, within B158DRAFT_2096at 232.908 kb on - strand, within B158DRAFT_2096at 232.913 kb on - strand, within B158DRAFT_2096at 232.914 kb on + strand, within B158DRAFT_2096at 232.922 kb on - strand, within B158DRAFT_2096at 233.036 kb on + strand, within B158DRAFT_2096at 233.130 kb on + strandat 233.232 kb on - strandat 233.263 kb on - strand, within B158DRAFT_2097

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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230,293 + B158DRAFT_2093 0.69 +0.4
230,301 - B158DRAFT_2093 0.72 -2.5
230,391 - +1.5
230,566 - B158DRAFT_2094 0.11 +1.1
230,577 - B158DRAFT_2094 0.12 +1.0
230,597 - B158DRAFT_2094 0.15 +1.1
230,597 - B158DRAFT_2094 0.15 +1.9
230,597 - B158DRAFT_2094 0.15 +1.6
230,684 + B158DRAFT_2094 0.28 +0.2
230,702 - B158DRAFT_2094 0.31 +1.6
230,749 - B158DRAFT_2094 0.38 +1.3
230,750 - B158DRAFT_2094 0.38 +1.8
230,756 + B158DRAFT_2094 0.39 -0.8
230,756 + B158DRAFT_2094 0.39 -1.8
230,756 + B158DRAFT_2094 0.39 -0.9
230,756 + B158DRAFT_2094 0.39 -2.0
230,764 - B158DRAFT_2094 0.40 +1.3
230,764 - B158DRAFT_2094 0.40 +0.9
230,905 + B158DRAFT_2094 0.61 -1.1
230,905 + B158DRAFT_2094 0.61 +1.4
230,905 + B158DRAFT_2094 0.61 -0.3
230,905 + B158DRAFT_2094 0.61 -1.1
230,905 + B158DRAFT_2094 0.61 -0.5
230,905 + B158DRAFT_2094 0.61 -0.7
230,913 - B158DRAFT_2094 0.62 +1.2
230,965 + B158DRAFT_2094 0.70 -0.1
230,965 + B158DRAFT_2094 0.70 -0.3
230,965 + B158DRAFT_2094 0.70 +1.0
230,965 + B158DRAFT_2094 0.70 +0.4
230,965 + B158DRAFT_2094 0.70 -0.7
230,965 + B158DRAFT_2094 0.70 -0.3
230,973 - B158DRAFT_2094 0.71 +1.8
230,973 - B158DRAFT_2094 0.71 +2.1
231,044 + B158DRAFT_2094 0.82 +0.0
231,052 - B158DRAFT_2094 0.83 +3.0
231,067 + B158DRAFT_2094 0.85 -1.0
231,217 - -0.8
231,234 + +0.3
231,234 + +0.2
231,234 + +2.0
231,244 + -0.4
231,244 + -0.7
231,252 - -0.3
231,252 - -0.9
231,252 - -1.4
231,258 + -0.3
231,279 - B158DRAFT_2095 0.10 -0.7
231,284 + B158DRAFT_2095 0.11 +0.7
231,284 + B158DRAFT_2095 0.11 +1.1
231,284 + B158DRAFT_2095 0.11 -0.1
231,284 + B158DRAFT_2095 0.11 +2.0
231,284 + B158DRAFT_2095 0.11 +0.5
231,284 + B158DRAFT_2095 0.11 +0.9
231,284 + B158DRAFT_2095 0.11 +0.5
231,284 + B158DRAFT_2095 0.11 +0.3
231,292 - B158DRAFT_2095 0.11 -0.5
231,306 - B158DRAFT_2095 0.13 -0.3
231,322 + B158DRAFT_2095 0.14 +0.2
231,339 + B158DRAFT_2095 0.16 -0.7
231,347 - B158DRAFT_2095 0.16 +2.5
231,380 + B158DRAFT_2095 0.19 +1.0
231,380 + B158DRAFT_2095 0.19 +0.4
231,388 - B158DRAFT_2095 0.20 +4.1
231,388 - B158DRAFT_2095 0.20 +1.5
231,397 + B158DRAFT_2095 0.21 +0.9
231,405 - B158DRAFT_2095 0.22 +0.2
231,440 + B158DRAFT_2095 0.25 -0.6
231,498 - B158DRAFT_2095 0.30 +0.5
231,575 - B158DRAFT_2095 0.37 -1.0
231,591 + B158DRAFT_2095 0.38 -1.0
231,663 - B158DRAFT_2095 0.45 -1.8
231,898 - B158DRAFT_2095 0.66 -0.4
231,935 + B158DRAFT_2095 0.70 +0.4
232,008 + B158DRAFT_2095 0.76 +1.0
232,008 + B158DRAFT_2095 0.76 -0.8
232,016 - B158DRAFT_2095 0.77 -0.3
232,045 - B158DRAFT_2095 0.80 -0.1
232,166 - +1.0
232,184 + -0.6
232,198 - +2.1
232,249 + -0.1
232,273 - +0.4
232,283 - -0.1
232,292 + -1.5
232,311 + +0.9
232,312 - -2.1
232,319 - -0.1
232,319 - -0.9
232,319 - +0.8
232,335 + -0.9
232,433 + B158DRAFT_2096 0.16 -1.2
232,441 + B158DRAFT_2096 0.17 -1.2
232,448 - B158DRAFT_2096 0.17 +0.6
232,484 + B158DRAFT_2096 0.22 +1.5
232,553 - B158DRAFT_2096 0.30 -0.7
232,575 + B158DRAFT_2096 0.32 +0.1
232,616 + B158DRAFT_2096 0.37 +0.9
232,648 + B158DRAFT_2096 0.41 +0.7
232,741 + B158DRAFT_2096 0.52 +0.9
232,807 - B158DRAFT_2096 0.60 +1.1
232,864 + B158DRAFT_2096 0.67 -0.3
232,872 - B158DRAFT_2096 0.67 -0.8
232,886 + B158DRAFT_2096 0.69 -0.3
232,900 + B158DRAFT_2096 0.71 -2.2
232,900 + B158DRAFT_2096 0.71 -0.3
232,908 - B158DRAFT_2096 0.72 +0.0
232,908 - B158DRAFT_2096 0.72 -0.5
232,908 - B158DRAFT_2096 0.72 -0.7
232,913 - B158DRAFT_2096 0.72 -0.9
232,914 + B158DRAFT_2096 0.72 -1.3
232,922 - B158DRAFT_2096 0.73 +0.2
233,036 + B158DRAFT_2096 0.87 -0.8
233,130 + -0.4
233,232 - -0.2
233,263 - B158DRAFT_2097 0.13 -1.7

Or see this region's nucleotide sequence