Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2094

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2092 and B158DRAFT_2093 are separated by 126 nucleotidesB158DRAFT_2093 and B158DRAFT_2094 are separated by 103 nucleotidesB158DRAFT_2094 and B158DRAFT_2095 are separated by 2 nucleotides B158DRAFT_2092: B158DRAFT_2092 - Predicted membrane protein, at 229,262 to 229,948 _2092 B158DRAFT_2093: B158DRAFT_2093 - hypothetical protein, at 230,075 to 230,389 _2093 B158DRAFT_2094: B158DRAFT_2094 - Predicted hydrolase of the alpha/beta superfamily, at 230,493 to 231,164 _2094 B158DRAFT_2095: B158DRAFT_2095 - Predicted ATPase, at 231,167 to 232,270 _2095 Position (kb) 230 231 232Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 229.506 kb on + strand, within B158DRAFT_2092at 229.506 kb on + strand, within B158DRAFT_2092at 229.654 kb on + strand, within B158DRAFT_2092at 229.654 kb on + strand, within B158DRAFT_2092at 229.654 kb on + strand, within B158DRAFT_2092at 229.654 kb on + strand, within B158DRAFT_2092at 229.662 kb on - strand, within B158DRAFT_2092at 229.662 kb on - strand, within B158DRAFT_2092at 229.662 kb on - strand, within B158DRAFT_2092at 229.662 kb on - strand, within B158DRAFT_2092at 229.662 kb on - strand, within B158DRAFT_2092at 229.688 kb on + strand, within B158DRAFT_2092at 229.696 kb on - strand, within B158DRAFT_2092at 229.720 kb on - strand, within B158DRAFT_2092at 229.774 kb on + strand, within B158DRAFT_2092at 229.782 kb on - strand, within B158DRAFT_2092at 229.811 kb on + strand, within B158DRAFT_2092at 229.811 kb on - strand, within B158DRAFT_2092at 229.817 kb on + strand, within B158DRAFT_2092at 229.818 kb on - strand, within B158DRAFT_2092at 229.825 kb on - strand, within B158DRAFT_2092at 229.828 kb on + strand, within B158DRAFT_2092at 229.843 kb on - strand, within B158DRAFT_2092at 229.919 kb on - strandat 229.941 kb on - strandat 229.941 kb on - strandat 229.941 kb on - strandat 229.965 kb on + strandat 229.965 kb on + strandat 229.991 kb on - strandat 230.030 kb on - strandat 230.064 kb on + strandat 230.064 kb on + strandat 230.064 kb on + strandat 230.064 kb on + strandat 230.064 kb on + strandat 230.072 kb on - strandat 230.072 kb on - strandat 230.072 kb on - strandat 230.072 kb on - strandat 230.072 kb on - strandat 230.293 kb on + strand, within B158DRAFT_2093at 230.301 kb on - strand, within B158DRAFT_2093at 230.391 kb on - strandat 230.566 kb on - strand, within B158DRAFT_2094at 230.577 kb on - strand, within B158DRAFT_2094at 230.597 kb on - strand, within B158DRAFT_2094at 230.597 kb on - strand, within B158DRAFT_2094at 230.597 kb on - strand, within B158DRAFT_2094at 230.684 kb on + strand, within B158DRAFT_2094at 230.702 kb on - strand, within B158DRAFT_2094at 230.749 kb on - strand, within B158DRAFT_2094at 230.750 kb on - strand, within B158DRAFT_2094at 230.756 kb on + strand, within B158DRAFT_2094at 230.756 kb on + strand, within B158DRAFT_2094at 230.756 kb on + strand, within B158DRAFT_2094at 230.756 kb on + strand, within B158DRAFT_2094at 230.764 kb on - strand, within B158DRAFT_2094at 230.764 kb on - strand, within B158DRAFT_2094at 230.905 kb on + strand, within B158DRAFT_2094at 230.905 kb on + strand, within B158DRAFT_2094at 230.905 kb on + strand, within B158DRAFT_2094at 230.905 kb on + strand, within B158DRAFT_2094at 230.905 kb on + strand, within B158DRAFT_2094at 230.905 kb on + strand, within B158DRAFT_2094at 230.913 kb on - strand, within B158DRAFT_2094at 230.965 kb on + strand, within B158DRAFT_2094at 230.965 kb on + strand, within B158DRAFT_2094at 230.965 kb on + strand, within B158DRAFT_2094at 230.965 kb on + strand, within B158DRAFT_2094at 230.965 kb on + strand, within B158DRAFT_2094at 230.965 kb on + strand, within B158DRAFT_2094at 230.973 kb on - strand, within B158DRAFT_2094at 230.973 kb on - strand, within B158DRAFT_2094at 231.044 kb on + strand, within B158DRAFT_2094at 231.052 kb on - strand, within B158DRAFT_2094at 231.067 kb on + strand, within B158DRAFT_2094at 231.217 kb on - strandat 231.234 kb on + strandat 231.234 kb on + strandat 231.234 kb on + strandat 231.244 kb on + strandat 231.244 kb on + strandat 231.252 kb on - strandat 231.252 kb on - strandat 231.252 kb on - strandat 231.258 kb on + strandat 231.279 kb on - strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.284 kb on + strand, within B158DRAFT_2095at 231.292 kb on - strand, within B158DRAFT_2095at 231.306 kb on - strand, within B158DRAFT_2095at 231.322 kb on + strand, within B158DRAFT_2095at 231.339 kb on + strand, within B158DRAFT_2095at 231.347 kb on - strand, within B158DRAFT_2095at 231.380 kb on + strand, within B158DRAFT_2095at 231.380 kb on + strand, within B158DRAFT_2095at 231.388 kb on - strand, within B158DRAFT_2095at 231.388 kb on - strand, within B158DRAFT_2095at 231.397 kb on + strand, within B158DRAFT_2095at 231.405 kb on - strand, within B158DRAFT_2095at 231.440 kb on + strand, within B158DRAFT_2095at 231.498 kb on - strand, within B158DRAFT_2095at 231.575 kb on - strand, within B158DRAFT_2095at 231.591 kb on + strand, within B158DRAFT_2095at 231.663 kb on - strand, within B158DRAFT_2095at 231.898 kb on - strand, within B158DRAFT_2095at 231.935 kb on + strand, within B158DRAFT_2095at 232.008 kb on + strand, within B158DRAFT_2095at 232.008 kb on + strand, within B158DRAFT_2095at 232.016 kb on - strand, within B158DRAFT_2095at 232.045 kb on - strand, within B158DRAFT_2095

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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229,506 + B158DRAFT_2092 0.36 -0.5
229,506 + B158DRAFT_2092 0.36 +0.2
229,654 + B158DRAFT_2092 0.57 -1.2
229,654 + B158DRAFT_2092 0.57 +0.2
229,654 + B158DRAFT_2092 0.57 -0.5
229,654 + B158DRAFT_2092 0.57 -2.0
229,662 - B158DRAFT_2092 0.58 -1.9
229,662 - B158DRAFT_2092 0.58 -1.1
229,662 - B158DRAFT_2092 0.58 -1.8
229,662 - B158DRAFT_2092 0.58 -0.6
229,662 - B158DRAFT_2092 0.58 +0.5
229,688 + B158DRAFT_2092 0.62 +1.4
229,696 - B158DRAFT_2092 0.63 -0.6
229,720 - B158DRAFT_2092 0.67 +1.5
229,774 + B158DRAFT_2092 0.75 -2.1
229,782 - B158DRAFT_2092 0.76 -0.4
229,811 + B158DRAFT_2092 0.80 -0.8
229,811 - B158DRAFT_2092 0.80 -2.9
229,817 + B158DRAFT_2092 0.81 -0.8
229,818 - B158DRAFT_2092 0.81 -2.7
229,825 - B158DRAFT_2092 0.82 -1.4
229,828 + B158DRAFT_2092 0.82 -0.4
229,843 - B158DRAFT_2092 0.85 -0.1
229,919 - -0.1
229,941 - -0.4
229,941 - +3.1
229,941 - -1.4
229,965 + +1.7
229,965 + +0.2
229,991 - +0.3
230,030 - +0.8
230,064 + -0.8
230,064 + -1.4
230,064 + -1.1
230,064 + -1.0
230,064 + -0.1
230,072 - +1.1
230,072 - -0.5
230,072 - -1.9
230,072 - -1.0
230,072 - +0.3
230,293 + B158DRAFT_2093 0.69 +0.4
230,301 - B158DRAFT_2093 0.72 -2.5
230,391 - +1.5
230,566 - B158DRAFT_2094 0.11 +1.1
230,577 - B158DRAFT_2094 0.12 +1.0
230,597 - B158DRAFT_2094 0.15 +1.1
230,597 - B158DRAFT_2094 0.15 +1.9
230,597 - B158DRAFT_2094 0.15 +1.6
230,684 + B158DRAFT_2094 0.28 +0.2
230,702 - B158DRAFT_2094 0.31 +1.6
230,749 - B158DRAFT_2094 0.38 +1.3
230,750 - B158DRAFT_2094 0.38 +1.8
230,756 + B158DRAFT_2094 0.39 -0.8
230,756 + B158DRAFT_2094 0.39 -1.8
230,756 + B158DRAFT_2094 0.39 -0.9
230,756 + B158DRAFT_2094 0.39 -2.0
230,764 - B158DRAFT_2094 0.40 +1.3
230,764 - B158DRAFT_2094 0.40 +0.9
230,905 + B158DRAFT_2094 0.61 -1.1
230,905 + B158DRAFT_2094 0.61 +1.4
230,905 + B158DRAFT_2094 0.61 -0.3
230,905 + B158DRAFT_2094 0.61 -1.1
230,905 + B158DRAFT_2094 0.61 -0.5
230,905 + B158DRAFT_2094 0.61 -0.7
230,913 - B158DRAFT_2094 0.62 +1.2
230,965 + B158DRAFT_2094 0.70 -0.1
230,965 + B158DRAFT_2094 0.70 -0.3
230,965 + B158DRAFT_2094 0.70 +1.0
230,965 + B158DRAFT_2094 0.70 +0.4
230,965 + B158DRAFT_2094 0.70 -0.7
230,965 + B158DRAFT_2094 0.70 -0.3
230,973 - B158DRAFT_2094 0.71 +1.8
230,973 - B158DRAFT_2094 0.71 +2.1
231,044 + B158DRAFT_2094 0.82 +0.0
231,052 - B158DRAFT_2094 0.83 +3.0
231,067 + B158DRAFT_2094 0.85 -1.0
231,217 - -0.8
231,234 + +0.3
231,234 + +0.2
231,234 + +2.0
231,244 + -0.4
231,244 + -0.7
231,252 - -0.3
231,252 - -0.9
231,252 - -1.4
231,258 + -0.3
231,279 - B158DRAFT_2095 0.10 -0.7
231,284 + B158DRAFT_2095 0.11 +0.7
231,284 + B158DRAFT_2095 0.11 +1.1
231,284 + B158DRAFT_2095 0.11 -0.1
231,284 + B158DRAFT_2095 0.11 +2.0
231,284 + B158DRAFT_2095 0.11 +0.5
231,284 + B158DRAFT_2095 0.11 +0.9
231,284 + B158DRAFT_2095 0.11 +0.5
231,284 + B158DRAFT_2095 0.11 +0.3
231,292 - B158DRAFT_2095 0.11 -0.5
231,306 - B158DRAFT_2095 0.13 -0.3
231,322 + B158DRAFT_2095 0.14 +0.2
231,339 + B158DRAFT_2095 0.16 -0.7
231,347 - B158DRAFT_2095 0.16 +2.5
231,380 + B158DRAFT_2095 0.19 +1.0
231,380 + B158DRAFT_2095 0.19 +0.4
231,388 - B158DRAFT_2095 0.20 +4.1
231,388 - B158DRAFT_2095 0.20 +1.5
231,397 + B158DRAFT_2095 0.21 +0.9
231,405 - B158DRAFT_2095 0.22 +0.2
231,440 + B158DRAFT_2095 0.25 -0.6
231,498 - B158DRAFT_2095 0.30 +0.5
231,575 - B158DRAFT_2095 0.37 -1.0
231,591 + B158DRAFT_2095 0.38 -1.0
231,663 - B158DRAFT_2095 0.45 -1.8
231,898 - B158DRAFT_2095 0.66 -0.4
231,935 + B158DRAFT_2095 0.70 +0.4
232,008 + B158DRAFT_2095 0.76 +1.0
232,008 + B158DRAFT_2095 0.76 -0.8
232,016 - B158DRAFT_2095 0.77 -0.3
232,045 - B158DRAFT_2095 0.80 -0.1

Or see this region's nucleotide sequence