Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2089

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2086 and B158DRAFT_2087 are separated by 114 nucleotidesB158DRAFT_2087 and B158DRAFT_2088 are separated by 17 nucleotidesB158DRAFT_2088 and B158DRAFT_2089 are separated by 16 nucleotidesB158DRAFT_2089 and B158DRAFT_2090 are separated by 76 nucleotides B158DRAFT_2086: B158DRAFT_2086 - K+-dependent Na+/Ca+ exchanger related-protein, at 224,440 to 225,423 _2086 B158DRAFT_2087: B158DRAFT_2087 - hypothetical protein, at 225,538 to 225,720 _2087 B158DRAFT_2088: B158DRAFT_2088 - Predicted transcriptional regulator, BolA superfamily, at 225,738 to 225,983 _2088 B158DRAFT_2089: B158DRAFT_2089 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7), at 226,000 to 227,259 _2089 B158DRAFT_2090: B158DRAFT_2090 - Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain, at 227,336 to 228,502 _2090 Position (kb) 225 226 227 228Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 225.057 kb on + strand, within B158DRAFT_2086at 225.115 kb on - strand, within B158DRAFT_2086at 225.155 kb on - strand, within B158DRAFT_2086at 225.182 kb on + strand, within B158DRAFT_2086at 225.198 kb on + strand, within B158DRAFT_2086at 225.198 kb on + strand, within B158DRAFT_2086at 225.219 kb on - strand, within B158DRAFT_2086at 225.234 kb on + strand, within B158DRAFT_2086at 225.242 kb on - strand, within B158DRAFT_2086at 225.244 kb on + strand, within B158DRAFT_2086at 225.371 kb on + strandat 225.371 kb on + strandat 225.379 kb on - strandat 225.379 kb on - strandat 225.379 kb on - strandat 225.379 kb on - strandat 225.384 kb on + strandat 225.436 kb on - strandat 225.488 kb on - strandat 225.516 kb on + strandat 225.524 kb on - strandat 225.557 kb on + strand, within B158DRAFT_2087at 225.557 kb on + strand, within B158DRAFT_2087at 225.565 kb on - strand, within B158DRAFT_2087at 225.565 kb on - strand, within B158DRAFT_2087at 225.575 kb on + strand, within B158DRAFT_2087at 227.477 kb on - strand, within B158DRAFT_2090at 227.528 kb on - strand, within B158DRAFT_2090at 227.546 kb on + strand, within B158DRAFT_2090at 227.551 kb on - strand, within B158DRAFT_2090at 227.565 kb on - strand, within B158DRAFT_2090at 227.660 kb on + strand, within B158DRAFT_2090at 227.665 kb on + strand, within B158DRAFT_2090at 227.665 kb on + strand, within B158DRAFT_2090at 227.665 kb on + strand, within B158DRAFT_2090at 227.673 kb on - strand, within B158DRAFT_2090at 227.673 kb on - strand, within B158DRAFT_2090at 227.679 kb on + strand, within B158DRAFT_2090at 227.679 kb on + strand, within B158DRAFT_2090at 227.679 kb on + strand, within B158DRAFT_2090at 227.687 kb on - strand, within B158DRAFT_2090at 227.687 kb on - strand, within B158DRAFT_2090at 227.717 kb on + strand, within B158DRAFT_2090at 227.728 kb on - strand, within B158DRAFT_2090at 227.804 kb on - strand, within B158DRAFT_2090at 227.817 kb on + strand, within B158DRAFT_2090at 227.817 kb on + strand, within B158DRAFT_2090at 227.817 kb on + strand, within B158DRAFT_2090at 227.817 kb on + strand, within B158DRAFT_2090at 227.824 kb on + strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.825 kb on - strand, within B158DRAFT_2090at 227.947 kb on - strand, within B158DRAFT_2090at 227.949 kb on + strand, within B158DRAFT_2090at 227.981 kb on + strand, within B158DRAFT_2090at 228.041 kb on + strand, within B158DRAFT_2090at 228.093 kb on - strand, within B158DRAFT_2090at 228.103 kb on + strand, within B158DRAFT_2090at 228.106 kb on - strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.123 kb on + strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.131 kb on - strand, within B158DRAFT_2090at 228.245 kb on - strand, within B158DRAFT_2090at 228.256 kb on + strand, within B158DRAFT_2090

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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225,057 + B158DRAFT_2086 0.63 +0.1
225,115 - B158DRAFT_2086 0.69 -0.8
225,155 - B158DRAFT_2086 0.73 -2.1
225,182 + B158DRAFT_2086 0.75 -2.0
225,198 + B158DRAFT_2086 0.77 +0.1
225,198 + B158DRAFT_2086 0.77 -1.6
225,219 - B158DRAFT_2086 0.79 -1.9
225,234 + B158DRAFT_2086 0.81 -1.6
225,242 - B158DRAFT_2086 0.82 -3.1
225,244 + B158DRAFT_2086 0.82 -1.6
225,371 + -1.2
225,371 + -0.1
225,379 - +0.4
225,379 - +0.9
225,379 - -1.7
225,379 - -3.2
225,384 + +1.5
225,436 - -2.6
225,488 - -0.8
225,516 + -0.7
225,524 - -0.3
225,557 + B158DRAFT_2087 0.10 -0.8
225,557 + B158DRAFT_2087 0.10 +0.2
225,565 - B158DRAFT_2087 0.15 -0.7
225,565 - B158DRAFT_2087 0.15 -0.8
225,575 + B158DRAFT_2087 0.20 -3.7
227,477 - B158DRAFT_2090 0.12 +0.2
227,528 - B158DRAFT_2090 0.16 +0.3
227,546 + B158DRAFT_2090 0.18 +1.0
227,551 - B158DRAFT_2090 0.18 +0.5
227,565 - B158DRAFT_2090 0.20 -0.3
227,660 + B158DRAFT_2090 0.28 +0.2
227,665 + B158DRAFT_2090 0.28 +0.7
227,665 + B158DRAFT_2090 0.28 +1.3
227,665 + B158DRAFT_2090 0.28 -0.4
227,673 - B158DRAFT_2090 0.29 +0.7
227,673 - B158DRAFT_2090 0.29 +0.7
227,679 + B158DRAFT_2090 0.29 +0.7
227,679 + B158DRAFT_2090 0.29 +0.1
227,679 + B158DRAFT_2090 0.29 +1.3
227,687 - B158DRAFT_2090 0.30 +0.2
227,687 - B158DRAFT_2090 0.30 -0.3
227,717 + B158DRAFT_2090 0.33 +0.2
227,728 - B158DRAFT_2090 0.34 +0.8
227,804 - B158DRAFT_2090 0.40 +0.4
227,817 + B158DRAFT_2090 0.41 +0.5
227,817 + B158DRAFT_2090 0.41 -1.2
227,817 + B158DRAFT_2090 0.41 -0.2
227,817 + B158DRAFT_2090 0.41 -0.9
227,824 + B158DRAFT_2090 0.42 -0.4
227,825 - B158DRAFT_2090 0.42 +0.4
227,825 - B158DRAFT_2090 0.42 -0.5
227,825 - B158DRAFT_2090 0.42 -1.1
227,825 - B158DRAFT_2090 0.42 +0.4
227,825 - B158DRAFT_2090 0.42 +1.1
227,825 - B158DRAFT_2090 0.42 -1.6
227,825 - B158DRAFT_2090 0.42 +0.4
227,825 - B158DRAFT_2090 0.42 -0.5
227,825 - B158DRAFT_2090 0.42 +1.5
227,825 - B158DRAFT_2090 0.42 -0.3
227,825 - B158DRAFT_2090 0.42 -0.0
227,947 - B158DRAFT_2090 0.52 -0.8
227,949 + B158DRAFT_2090 0.53 +2.6
227,981 + B158DRAFT_2090 0.55 +0.3
228,041 + B158DRAFT_2090 0.60 -0.5
228,093 - B158DRAFT_2090 0.65 +0.9
228,103 + B158DRAFT_2090 0.66 +0.7
228,106 - B158DRAFT_2090 0.66 +0.2
228,123 + B158DRAFT_2090 0.67 +2.4
228,123 + B158DRAFT_2090 0.67 +2.2
228,123 + B158DRAFT_2090 0.67 +0.2
228,123 + B158DRAFT_2090 0.67 +2.5
228,123 + B158DRAFT_2090 0.67 +0.7
228,123 + B158DRAFT_2090 0.67 -0.6
228,123 + B158DRAFT_2090 0.67 +0.4
228,123 + B158DRAFT_2090 0.67 -1.7
228,131 - B158DRAFT_2090 0.68 -1.4
228,131 - B158DRAFT_2090 0.68 +0.2
228,131 - B158DRAFT_2090 0.68 +0.7
228,131 - B158DRAFT_2090 0.68 +1.0
228,131 - B158DRAFT_2090 0.68 -0.2
228,131 - B158DRAFT_2090 0.68 -0.8
228,131 - B158DRAFT_2090 0.68 -2.8
228,131 - B158DRAFT_2090 0.68 -0.9
228,131 - B158DRAFT_2090 0.68 +1.7
228,131 - B158DRAFT_2090 0.68 +0.4
228,245 - B158DRAFT_2090 0.78 -1.5
228,256 + B158DRAFT_2090 0.79 -0.7

Or see this region's nucleotide sequence