Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2021

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2019 and B158DRAFT_2020 are separated by 109 nucleotidesB158DRAFT_2020 and B158DRAFT_2021 are separated by 27 nucleotidesB158DRAFT_2021 and B158DRAFT_2022 are separated by 439 nucleotides B158DRAFT_2019: B158DRAFT_2019 - hypothetical protein, at 148,346 to 149,326 _2019 B158DRAFT_2020: B158DRAFT_2020 - Polyketide cyclase / dehydrase and lipid transport., at 149,436 to 149,975 _2020 B158DRAFT_2021: B158DRAFT_2021 - Outer membrane phospholipase A, at 150,003 to 151,283 _2021 B158DRAFT_2022: B158DRAFT_2022 - Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases, at 151,723 to 153,150 _2022 Position (kb) 150 151 152Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.134 kb on + strand, within B158DRAFT_2019at 149.142 kb on - strand, within B158DRAFT_2019at 149.142 kb on - strand, within B158DRAFT_2019at 149.142 kb on - strand, within B158DRAFT_2019at 149.225 kb on + strand, within B158DRAFT_2019at 149.247 kb on - strandat 149.247 kb on - strandat 149.269 kb on + strandat 149.288 kb on - strandat 149.336 kb on + strandat 149.336 kb on + strandat 149.336 kb on + strandat 149.336 kb on + strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.344 kb on - strandat 149.544 kb on - strand, within B158DRAFT_2020at 149.553 kb on + strand, within B158DRAFT_2020at 149.553 kb on + strand, within B158DRAFT_2020at 149.573 kb on - strand, within B158DRAFT_2020at 149.641 kb on + strand, within B158DRAFT_2020at 149.652 kb on + strand, within B158DRAFT_2020at 149.657 kb on + strand, within B158DRAFT_2020at 149.664 kb on + strand, within B158DRAFT_2020at 149.710 kb on + strand, within B158DRAFT_2020at 149.844 kb on + strand, within B158DRAFT_2020at 149.852 kb on - strand, within B158DRAFT_2020at 149.892 kb on + strand, within B158DRAFT_2020at 149.909 kb on + strand, within B158DRAFT_2020at 149.909 kb on + strand, within B158DRAFT_2020at 149.914 kb on - strand, within B158DRAFT_2020at 149.961 kb on + strandat 149.964 kb on + strandat 149.969 kb on - strandat 149.969 kb on - strandat 149.989 kb on - strandat 150.007 kb on + strandat 150.124 kb on + strandat 150.133 kb on - strand, within B158DRAFT_2021at 150.142 kb on + strand, within B158DRAFT_2021at 150.266 kb on - strand, within B158DRAFT_2021at 150.268 kb on + strand, within B158DRAFT_2021at 150.276 kb on - strand, within B158DRAFT_2021at 150.355 kb on + strand, within B158DRAFT_2021at 150.363 kb on - strand, within B158DRAFT_2021at 150.363 kb on - strand, within B158DRAFT_2021at 150.448 kb on + strand, within B158DRAFT_2021at 150.453 kb on + strand, within B158DRAFT_2021at 150.456 kb on - strand, within B158DRAFT_2021at 150.463 kb on + strand, within B158DRAFT_2021at 150.471 kb on - strand, within B158DRAFT_2021at 150.490 kb on + strand, within B158DRAFT_2021at 150.717 kb on - strand, within B158DRAFT_2021at 150.732 kb on + strand, within B158DRAFT_2021at 150.732 kb on + strand, within B158DRAFT_2021at 150.739 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.744 kb on + strand, within B158DRAFT_2021at 150.747 kb on - strand, within B158DRAFT_2021at 150.747 kb on - strand, within B158DRAFT_2021at 150.752 kb on - strand, within B158DRAFT_2021at 150.847 kb on - strand, within B158DRAFT_2021at 150.871 kb on - strand, within B158DRAFT_2021at 150.879 kb on + strand, within B158DRAFT_2021at 150.887 kb on - strand, within B158DRAFT_2021at 150.935 kb on + strand, within B158DRAFT_2021at 150.940 kb on + strand, within B158DRAFT_2021at 150.940 kb on + strand, within B158DRAFT_2021at 150.940 kb on + strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.948 kb on - strand, within B158DRAFT_2021at 150.950 kb on + strand, within B158DRAFT_2021at 150.950 kb on + strand, within B158DRAFT_2021at 150.950 kb on + strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.958 kb on - strand, within B158DRAFT_2021at 150.990 kb on + strand, within B158DRAFT_2021at 151.009 kb on - strand, within B158DRAFT_2021at 151.085 kb on - strand, within B158DRAFT_2021at 151.089 kb on + strand, within B158DRAFT_2021at 151.100 kb on - strand, within B158DRAFT_2021at 151.137 kb on + strand, within B158DRAFT_2021at 151.137 kb on + strand, within B158DRAFT_2021at 151.142 kb on + strand, within B158DRAFT_2021at 151.143 kb on + strand, within B158DRAFT_2021at 151.150 kb on - strand, within B158DRAFT_2021at 151.218 kb on - strandat 151.218 kb on - strandat 151.224 kb on + strandat 151.246 kb on + strandat 151.266 kb on - strandat 151.364 kb on + strandat 151.377 kb on - strandat 151.386 kb on + strandat 151.386 kb on + strandat 151.394 kb on - strandat 151.517 kb on - strandat 151.576 kb on + strandat 151.590 kb on + strandat 151.668 kb on - strandat 151.706 kb on - strandat 151.723 kb on - strandat 151.724 kb on - strandat 151.724 kb on - strandat 151.829 kb on + strandat 151.855 kb on - strandat 151.886 kb on + strand, within B158DRAFT_2022at 151.928 kb on + strand, within B158DRAFT_2022at 151.971 kb on - strand, within B158DRAFT_2022at 152.053 kb on + strand, within B158DRAFT_2022at 152.110 kb on - strand, within B158DRAFT_2022at 152.195 kb on + strand, within B158DRAFT_2022

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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149,134 + B158DRAFT_2019 0.80 -1.5
149,134 + B158DRAFT_2019 0.80 +0.1
149,134 + B158DRAFT_2019 0.80 -1.0
149,134 + B158DRAFT_2019 0.80 -2.5
149,134 + B158DRAFT_2019 0.80 -0.7
149,134 + B158DRAFT_2019 0.80 -1.6
149,142 - B158DRAFT_2019 0.81 -1.2
149,142 - B158DRAFT_2019 0.81 -0.8
149,142 - B158DRAFT_2019 0.81 -0.9
149,225 + B158DRAFT_2019 0.90 -0.7
149,247 - +2.1
149,247 - -2.1
149,269 + +0.1
149,288 - -0.8
149,336 + -1.7
149,336 + -3.1
149,336 + +0.1
149,336 + -1.7
149,344 - +0.6
149,344 - -1.2
149,344 - -0.7
149,344 - +0.1
149,344 - -1.1
149,344 - +1.4
149,544 - B158DRAFT_2020 0.20 -0.5
149,553 + B158DRAFT_2020 0.22 -0.1
149,553 + B158DRAFT_2020 0.22 -0.1
149,573 - B158DRAFT_2020 0.25 -1.1
149,641 + B158DRAFT_2020 0.38 -0.9
149,652 + B158DRAFT_2020 0.40 +0.2
149,657 + B158DRAFT_2020 0.41 +0.1
149,664 + B158DRAFT_2020 0.42 +0.1
149,710 + B158DRAFT_2020 0.51 -1.0
149,844 + B158DRAFT_2020 0.76 +0.6
149,852 - B158DRAFT_2020 0.77 -0.0
149,892 + B158DRAFT_2020 0.84 +1.0
149,909 + B158DRAFT_2020 0.88 +0.9
149,909 + B158DRAFT_2020 0.88 -1.2
149,914 - B158DRAFT_2020 0.89 +1.7
149,961 + +1.0
149,964 + +1.8
149,969 - -1.3
149,969 - -1.7
149,989 - -1.3
150,007 + -0.6
150,124 + -1.0
150,133 - B158DRAFT_2021 0.10 -2.4
150,142 + B158DRAFT_2021 0.11 -2.7
150,266 - B158DRAFT_2021 0.21 -2.4
150,268 + B158DRAFT_2021 0.21 -0.3
150,276 - B158DRAFT_2021 0.21 +0.6
150,355 + B158DRAFT_2021 0.27 -0.0
150,363 - B158DRAFT_2021 0.28 -1.3
150,363 - B158DRAFT_2021 0.28 +0.2
150,448 + B158DRAFT_2021 0.35 -1.8
150,453 + B158DRAFT_2021 0.35 -0.8
150,456 - B158DRAFT_2021 0.35 -0.7
150,463 + B158DRAFT_2021 0.36 -0.9
150,471 - B158DRAFT_2021 0.37 -1.7
150,490 + B158DRAFT_2021 0.38 -0.7
150,717 - B158DRAFT_2021 0.56 -1.4
150,732 + B158DRAFT_2021 0.57 +1.9
150,732 + B158DRAFT_2021 0.57 -0.8
150,739 + B158DRAFT_2021 0.57 -0.8
150,744 + B158DRAFT_2021 0.58 +0.1
150,744 + B158DRAFT_2021 0.58 +2.2
150,744 + B158DRAFT_2021 0.58 -2.5
150,744 + B158DRAFT_2021 0.58 -0.4
150,747 - B158DRAFT_2021 0.58 -0.1
150,747 - B158DRAFT_2021 0.58 -0.5
150,752 - B158DRAFT_2021 0.58 -1.0
150,847 - B158DRAFT_2021 0.66 +2.5
150,871 - B158DRAFT_2021 0.68 -0.4
150,879 + B158DRAFT_2021 0.68 -0.1
150,887 - B158DRAFT_2021 0.69 -0.5
150,935 + B158DRAFT_2021 0.73 +4.2
150,940 + B158DRAFT_2021 0.73 -2.0
150,940 + B158DRAFT_2021 0.73 -1.2
150,940 + B158DRAFT_2021 0.73 -2.2
150,948 - B158DRAFT_2021 0.74 +0.3
150,948 - B158DRAFT_2021 0.74 -1.3
150,948 - B158DRAFT_2021 0.74 +0.8
150,948 - B158DRAFT_2021 0.74 -0.8
150,950 + B158DRAFT_2021 0.74 -0.1
150,950 + B158DRAFT_2021 0.74 +0.3
150,950 + B158DRAFT_2021 0.74 -1.2
150,958 - B158DRAFT_2021 0.75 -2.6
150,958 - B158DRAFT_2021 0.75 -3.8
150,958 - B158DRAFT_2021 0.75 -0.9
150,958 - B158DRAFT_2021 0.75 +0.7
150,958 - B158DRAFT_2021 0.75 +1.5
150,958 - B158DRAFT_2021 0.75 -2.0
150,990 + B158DRAFT_2021 0.77 -0.1
151,009 - B158DRAFT_2021 0.79 -1.3
151,085 - B158DRAFT_2021 0.84 -0.6
151,089 + B158DRAFT_2021 0.85 -0.5
151,100 - B158DRAFT_2021 0.86 +0.4
151,137 + B158DRAFT_2021 0.89 -2.5
151,137 + B158DRAFT_2021 0.89 +4.7
151,142 + B158DRAFT_2021 0.89 -0.4
151,143 + B158DRAFT_2021 0.89 -0.3
151,150 - B158DRAFT_2021 0.90 -0.3
151,218 - +0.3
151,218 - -2.1
151,224 + -2.3
151,246 + +2.2
151,266 - -1.1
151,364 + -3.1
151,377 - -1.5
151,386 + -1.3
151,386 + -1.7
151,394 - -0.8
151,517 - -0.4
151,576 + +0.9
151,590 + +1.1
151,668 - -0.6
151,706 - +2.5
151,723 - -0.4
151,724 - +0.6
151,724 - -0.2
151,829 + -1.6
151,855 - -1.1
151,886 + B158DRAFT_2022 0.11 +0.9
151,928 + B158DRAFT_2022 0.14 -0.3
151,971 - B158DRAFT_2022 0.17 +0.3
152,053 + B158DRAFT_2022 0.23 +0.3
152,110 - B158DRAFT_2022 0.27 -0.7
152,195 + B158DRAFT_2022 0.33 -0.6

Or see this region's nucleotide sequence