Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1812

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1811 and B158DRAFT_1812 are separated by 5 nucleotidesB158DRAFT_1812 and B158DRAFT_1813 are separated by 35 nucleotidesB158DRAFT_1813 and B158DRAFT_1814 are separated by 69 nucleotides B158DRAFT_1811: B158DRAFT_1811 - arginine decarboxylase (EC 4.1.1.19), at 1,910,327 to 1,912,261 _1811 B158DRAFT_1812: B158DRAFT_1812 - Peptidylarginine deiminase and related enzymes, at 1,912,267 to 1,913,250 _1812 B158DRAFT_1813: B158DRAFT_1813 - N-carbamoylputrescine amidase, at 1,913,286 to 1,914,143 _1813 B158DRAFT_1814: B158DRAFT_1814 - Predicted enzyme related to lactoylglutathione lyase, at 1,914,213 to 1,914,590 _1814 Position (kb) 1912 1913 1914Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1911.269 kb on + strand, within B158DRAFT_1811at 1911.312 kb on - strand, within B158DRAFT_1811at 1911.338 kb on + strand, within B158DRAFT_1811at 1911.376 kb on + strand, within B158DRAFT_1811at 1911.388 kb on + strand, within B158DRAFT_1811at 1911.388 kb on + strand, within B158DRAFT_1811at 1911.406 kb on - strand, within B158DRAFT_1811at 1911.464 kb on + strand, within B158DRAFT_1811at 1911.470 kb on + strand, within B158DRAFT_1811at 1911.478 kb on - strand, within B158DRAFT_1811at 1911.478 kb on - strand, within B158DRAFT_1811at 1911.478 kb on - strand, within B158DRAFT_1811at 1911.478 kb on - strand, within B158DRAFT_1811at 1911.478 kb on - strand, within B158DRAFT_1811at 1911.480 kb on + strand, within B158DRAFT_1811at 1911.488 kb on - strand, within B158DRAFT_1811at 1911.517 kb on - strand, within B158DRAFT_1811at 1911.573 kb on + strand, within B158DRAFT_1811at 1911.573 kb on + strand, within B158DRAFT_1811at 1911.578 kb on + strand, within B158DRAFT_1811at 1911.591 kb on - strand, within B158DRAFT_1811at 1911.602 kb on + strand, within B158DRAFT_1811at 1911.602 kb on + strand, within B158DRAFT_1811at 1911.604 kb on - strand, within B158DRAFT_1811at 1911.622 kb on + strand, within B158DRAFT_1811at 1911.622 kb on + strand, within B158DRAFT_1811at 1911.622 kb on + strand, within B158DRAFT_1811at 1911.622 kb on + strand, within B158DRAFT_1811at 1911.630 kb on - strand, within B158DRAFT_1811at 1911.668 kb on - strand, within B158DRAFT_1811at 1911.703 kb on - strand, within B158DRAFT_1811at 1911.742 kb on - strand, within B158DRAFT_1811at 1911.770 kb on + strand, within B158DRAFT_1811at 1911.770 kb on + strand, within B158DRAFT_1811at 1911.778 kb on + strand, within B158DRAFT_1811at 1911.796 kb on + strand, within B158DRAFT_1811at 1911.825 kb on - strand, within B158DRAFT_1811at 1911.828 kb on + strand, within B158DRAFT_1811at 1911.913 kb on - strand, within B158DRAFT_1811at 1911.940 kb on + strand, within B158DRAFT_1811at 1911.940 kb on + strand, within B158DRAFT_1811at 1911.940 kb on + strand, within B158DRAFT_1811at 1911.948 kb on - strand, within B158DRAFT_1811at 1911.948 kb on - strand, within B158DRAFT_1811at 1911.948 kb on - strand, within B158DRAFT_1811at 1911.948 kb on - strand, within B158DRAFT_1811at 1911.948 kb on - strand, within B158DRAFT_1811at 1911.948 kb on - strand, within B158DRAFT_1811at 1911.948 kb on - strand, within B158DRAFT_1811at 1911.988 kb on - strand, within B158DRAFT_1811at 1912.010 kb on + strand, within B158DRAFT_1811at 1912.082 kb on + strandat 1912.095 kb on + strandat 1912.112 kb on + strandat 1912.182 kb on + strandat 1912.182 kb on + strandat 1912.190 kb on - strandat 1912.190 kb on - strandat 1912.190 kb on - strandat 1912.196 kb on + strandat 1912.202 kb on + strandat 1912.204 kb on - strandat 1912.204 kb on - strandat 1912.210 kb on - strandat 1912.263 kb on - strandat 1912.279 kb on + strandat 1912.279 kb on + strandat 1912.317 kb on - strandat 1912.318 kb on + strandat 1912.395 kb on + strand, within B158DRAFT_1812at 1912.403 kb on - strand, within B158DRAFT_1812at 1912.403 kb on - strand, within B158DRAFT_1812at 1912.442 kb on - strand, within B158DRAFT_1812at 1912.491 kb on + strand, within B158DRAFT_1812at 1912.499 kb on - strand, within B158DRAFT_1812at 1912.499 kb on - strand, within B158DRAFT_1812at 1912.560 kb on + strand, within B158DRAFT_1812at 1912.560 kb on + strand, within B158DRAFT_1812at 1912.568 kb on - strand, within B158DRAFT_1812at 1912.613 kb on + strand, within B158DRAFT_1812at 1912.650 kb on + strand, within B158DRAFT_1812at 1912.672 kb on - strand, within B158DRAFT_1812at 1912.728 kb on - strand, within B158DRAFT_1812at 1912.780 kb on - strand, within B158DRAFT_1812at 1912.810 kb on - strand, within B158DRAFT_1812at 1912.839 kb on + strand, within B158DRAFT_1812at 1912.869 kb on - strand, within B158DRAFT_1812at 1912.884 kb on - strand, within B158DRAFT_1812at 1912.917 kb on - strand, within B158DRAFT_1812at 1912.971 kb on - strand, within B158DRAFT_1812at 1913.046 kb on + strand, within B158DRAFT_1812at 1913.161 kb on + strandat 1913.173 kb on + strandat 1913.220 kb on + strandat 1913.345 kb on - strandat 1913.355 kb on + strandat 1913.369 kb on - strandat 1913.377 kb on + strand, within B158DRAFT_1813at 1913.383 kb on - strand, within B158DRAFT_1813at 1913.405 kb on + strand, within B158DRAFT_1813at 1913.425 kb on - strand, within B158DRAFT_1813at 1913.432 kb on - strand, within B158DRAFT_1813at 1913.496 kb on + strand, within B158DRAFT_1813at 1913.504 kb on - strand, within B158DRAFT_1813at 1913.512 kb on - strand, within B158DRAFT_1813at 1913.515 kb on + strand, within B158DRAFT_1813at 1913.523 kb on - strand, within B158DRAFT_1813at 1913.533 kb on - strand, within B158DRAFT_1813at 1913.576 kb on + strand, within B158DRAFT_1813at 1913.582 kb on - strand, within B158DRAFT_1813at 1913.584 kb on - strand, within B158DRAFT_1813at 1913.584 kb on - strand, within B158DRAFT_1813at 1913.594 kb on + strand, within B158DRAFT_1813at 1913.596 kb on - strand, within B158DRAFT_1813at 1913.604 kb on + strand, within B158DRAFT_1813at 1913.695 kb on + strand, within B158DRAFT_1813at 1913.695 kb on + strand, within B158DRAFT_1813at 1913.695 kb on + strand, within B158DRAFT_1813at 1913.703 kb on + strand, within B158DRAFT_1813at 1913.703 kb on - strand, within B158DRAFT_1813at 1913.703 kb on - strand, within B158DRAFT_1813at 1913.711 kb on - strand, within B158DRAFT_1813at 1913.734 kb on - strand, within B158DRAFT_1813at 1913.748 kb on + strand, within B158DRAFT_1813at 1913.748 kb on + strand, within B158DRAFT_1813at 1913.748 kb on + strand, within B158DRAFT_1813at 1913.748 kb on + strand, within B158DRAFT_1813at 1913.756 kb on - strand, within B158DRAFT_1813at 1913.756 kb on - strand, within B158DRAFT_1813at 1913.756 kb on - strand, within B158DRAFT_1813at 1913.756 kb on - strand, within B158DRAFT_1813at 1913.756 kb on - strand, within B158DRAFT_1813at 1913.756 kb on - strand, within B158DRAFT_1813at 1913.791 kb on + strand, within B158DRAFT_1813at 1913.791 kb on + strand, within B158DRAFT_1813at 1913.791 kb on + strand, within B158DRAFT_1813at 1913.791 kb on + strand, within B158DRAFT_1813at 1913.791 kb on - strand, within B158DRAFT_1813at 1913.799 kb on - strand, within B158DRAFT_1813at 1913.799 kb on - strand, within B158DRAFT_1813at 1913.799 kb on - strand, within B158DRAFT_1813at 1913.799 kb on - strand, within B158DRAFT_1813at 1913.824 kb on + strand, within B158DRAFT_1813at 1913.824 kb on + strand, within B158DRAFT_1813at 1913.824 kb on + strand, within B158DRAFT_1813at 1913.832 kb on - strand, within B158DRAFT_1813at 1913.832 kb on - strand, within B158DRAFT_1813at 1913.832 kb on - strand, within B158DRAFT_1813at 1913.837 kb on - strand, within B158DRAFT_1813at 1913.846 kb on - strand, within B158DRAFT_1813at 1913.854 kb on + strand, within B158DRAFT_1813at 1913.856 kb on + strand, within B158DRAFT_1813at 1913.864 kb on - strand, within B158DRAFT_1813at 1913.877 kb on + strand, within B158DRAFT_1813at 1913.883 kb on + strand, within B158DRAFT_1813at 1913.885 kb on - strand, within B158DRAFT_1813at 1913.891 kb on - strand, within B158DRAFT_1813at 1913.932 kb on + strand, within B158DRAFT_1813at 1913.937 kb on + strand, within B158DRAFT_1813at 1913.940 kb on - strand, within B158DRAFT_1813at 1913.940 kb on - strand, within B158DRAFT_1813at 1913.940 kb on - strand, within B158DRAFT_1813at 1914.014 kb on - strand, within B158DRAFT_1813at 1914.034 kb on + strand, within B158DRAFT_1813at 1914.041 kb on - strand, within B158DRAFT_1813at 1914.051 kb on - strand, within B158DRAFT_1813at 1914.095 kb on + strandat 1914.095 kb on + strandat 1914.095 kb on + strandat 1914.095 kb on + strandat 1914.103 kb on - strandat 1914.103 kb on - strandat 1914.103 kb on - strandat 1914.103 kb on - strandat 1914.103 kb on - strandat 1914.104 kb on + strandat 1914.123 kb on - strandat 1914.127 kb on + strandat 1914.135 kb on - strandat 1914.188 kb on - strandat 1914.203 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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1,911,269 + B158DRAFT_1811 0.49 +1.2
1,911,312 - B158DRAFT_1811 0.51 -1.1
1,911,338 + B158DRAFT_1811 0.52 -1.7
1,911,376 + B158DRAFT_1811 0.54 +2.0
1,911,388 + B158DRAFT_1811 0.55 +0.0
1,911,388 + B158DRAFT_1811 0.55 +0.6
1,911,406 - B158DRAFT_1811 0.56 -0.9
1,911,464 + B158DRAFT_1811 0.59 -0.9
1,911,470 + B158DRAFT_1811 0.59 +0.3
1,911,478 - B158DRAFT_1811 0.59 +2.7
1,911,478 - B158DRAFT_1811 0.59 -0.4
1,911,478 - B158DRAFT_1811 0.59 -0.3
1,911,478 - B158DRAFT_1811 0.59 -0.8
1,911,478 - B158DRAFT_1811 0.59 +0.6
1,911,480 + B158DRAFT_1811 0.60 -1.6
1,911,488 - B158DRAFT_1811 0.60 -0.4
1,911,517 - B158DRAFT_1811 0.61 -1.1
1,911,573 + B158DRAFT_1811 0.64 -1.5
1,911,573 + B158DRAFT_1811 0.64 -0.5
1,911,578 + B158DRAFT_1811 0.65 -1.6
1,911,591 - B158DRAFT_1811 0.65 +0.5
1,911,602 + B158DRAFT_1811 0.66 -2.4
1,911,602 + B158DRAFT_1811 0.66 -0.5
1,911,604 - B158DRAFT_1811 0.66 -0.5
1,911,622 + B158DRAFT_1811 0.67 -1.6
1,911,622 + B158DRAFT_1811 0.67 -0.9
1,911,622 + B158DRAFT_1811 0.67 -0.2
1,911,622 + B158DRAFT_1811 0.67 -1.2
1,911,630 - B158DRAFT_1811 0.67 -0.4
1,911,668 - B158DRAFT_1811 0.69 +2.1
1,911,703 - B158DRAFT_1811 0.71 -1.7
1,911,742 - B158DRAFT_1811 0.73 -0.8
1,911,770 + B158DRAFT_1811 0.75 -2.4
1,911,770 + B158DRAFT_1811 0.75 +0.3
1,911,778 + B158DRAFT_1811 0.75 -0.4
1,911,796 + B158DRAFT_1811 0.76 -1.4
1,911,825 - B158DRAFT_1811 0.77 +1.0
1,911,828 + B158DRAFT_1811 0.78 -0.8
1,911,913 - B158DRAFT_1811 0.82 -0.8
1,911,940 + B158DRAFT_1811 0.83 +0.5
1,911,940 + B158DRAFT_1811 0.83 -0.8
1,911,940 + B158DRAFT_1811 0.83 -1.6
1,911,948 - B158DRAFT_1811 0.84 -0.2
1,911,948 - B158DRAFT_1811 0.84 +0.8
1,911,948 - B158DRAFT_1811 0.84 +0.4
1,911,948 - B158DRAFT_1811 0.84 -1.8
1,911,948 - B158DRAFT_1811 0.84 -0.1
1,911,948 - B158DRAFT_1811 0.84 +0.4
1,911,948 - B158DRAFT_1811 0.84 +0.2
1,911,988 - B158DRAFT_1811 0.86 -0.4
1,912,010 + B158DRAFT_1811 0.87 -1.4
1,912,082 + +0.6
1,912,095 + -0.7
1,912,112 + -0.4
1,912,182 + -0.2
1,912,182 + +1.5
1,912,190 - -1.9
1,912,190 - -0.3
1,912,190 - +0.1
1,912,196 + -0.2
1,912,202 + -0.7
1,912,204 - -0.3
1,912,204 - +0.4
1,912,210 - -2.3
1,912,263 - +0.2
1,912,279 + -2.5
1,912,279 + -0.0
1,912,317 - +0.5
1,912,318 + +1.6
1,912,395 + B158DRAFT_1812 0.13 +0.4
1,912,403 - B158DRAFT_1812 0.14 -0.2
1,912,403 - B158DRAFT_1812 0.14 -1.2
1,912,442 - B158DRAFT_1812 0.18 -0.9
1,912,491 + B158DRAFT_1812 0.23 -1.5
1,912,499 - B158DRAFT_1812 0.24 -2.2
1,912,499 - B158DRAFT_1812 0.24 -0.3
1,912,560 + B158DRAFT_1812 0.30 +0.1
1,912,560 + B158DRAFT_1812 0.30 -0.6
1,912,568 - B158DRAFT_1812 0.31 -0.2
1,912,613 + B158DRAFT_1812 0.35 +0.1
1,912,650 + B158DRAFT_1812 0.39 -1.2
1,912,672 - B158DRAFT_1812 0.41 +0.0
1,912,728 - B158DRAFT_1812 0.47 -0.0
1,912,780 - B158DRAFT_1812 0.52 -0.4
1,912,810 - B158DRAFT_1812 0.55 +0.5
1,912,839 + B158DRAFT_1812 0.58 -0.2
1,912,869 - B158DRAFT_1812 0.61 -1.6
1,912,884 - B158DRAFT_1812 0.63 +0.2
1,912,917 - B158DRAFT_1812 0.66 +0.6
1,912,971 - B158DRAFT_1812 0.72 -0.4
1,913,046 + B158DRAFT_1812 0.79 -0.5
1,913,161 + +0.2
1,913,173 + -2.0
1,913,220 + +0.4
1,913,345 - -0.6
1,913,355 + +0.4
1,913,369 - -1.0
1,913,377 + B158DRAFT_1813 0.11 -0.3
1,913,383 - B158DRAFT_1813 0.11 -1.8
1,913,405 + B158DRAFT_1813 0.14 +0.1
1,913,425 - B158DRAFT_1813 0.16 +0.3
1,913,432 - B158DRAFT_1813 0.17 +1.7
1,913,496 + B158DRAFT_1813 0.24 -1.2
1,913,504 - B158DRAFT_1813 0.25 +0.1
1,913,512 - B158DRAFT_1813 0.26 -1.7
1,913,515 + B158DRAFT_1813 0.27 +0.5
1,913,523 - B158DRAFT_1813 0.28 -0.1
1,913,533 - B158DRAFT_1813 0.29 +0.3
1,913,576 + B158DRAFT_1813 0.34 +1.5
1,913,582 - B158DRAFT_1813 0.34 +1.4
1,913,584 - B158DRAFT_1813 0.35 -1.3
1,913,584 - B158DRAFT_1813 0.35 -1.0
1,913,594 + B158DRAFT_1813 0.36 -0.9
1,913,596 - B158DRAFT_1813 0.36 -1.3
1,913,604 + B158DRAFT_1813 0.37 -0.2
1,913,695 + B158DRAFT_1813 0.48 -0.6
1,913,695 + B158DRAFT_1813 0.48 -0.6
1,913,695 + B158DRAFT_1813 0.48 +2.1
1,913,703 + B158DRAFT_1813 0.49 -3.4
1,913,703 - B158DRAFT_1813 0.49 -1.5
1,913,703 - B158DRAFT_1813 0.49 -1.1
1,913,711 - B158DRAFT_1813 0.50 +0.7
1,913,734 - B158DRAFT_1813 0.52 -1.3
1,913,748 + B158DRAFT_1813 0.54 -1.9
1,913,748 + B158DRAFT_1813 0.54 +1.7
1,913,748 + B158DRAFT_1813 0.54 +0.2
1,913,748 + B158DRAFT_1813 0.54 -0.5
1,913,756 - B158DRAFT_1813 0.55 -0.5
1,913,756 - B158DRAFT_1813 0.55 -0.3
1,913,756 - B158DRAFT_1813 0.55 -1.0
1,913,756 - B158DRAFT_1813 0.55 -2.2
1,913,756 - B158DRAFT_1813 0.55 -1.5
1,913,756 - B158DRAFT_1813 0.55 -0.9
1,913,791 + B158DRAFT_1813 0.59 +1.2
1,913,791 + B158DRAFT_1813 0.59 +0.2
1,913,791 + B158DRAFT_1813 0.59 -3.2
1,913,791 + B158DRAFT_1813 0.59 +0.2
1,913,791 - B158DRAFT_1813 0.59 +0.3
1,913,799 - B158DRAFT_1813 0.60 -1.6
1,913,799 - B158DRAFT_1813 0.60 -1.3
1,913,799 - B158DRAFT_1813 0.60 -0.3
1,913,799 - B158DRAFT_1813 0.60 -1.2
1,913,824 + B158DRAFT_1813 0.63 +2.5
1,913,824 + B158DRAFT_1813 0.63 +0.5
1,913,824 + B158DRAFT_1813 0.63 -1.2
1,913,832 - B158DRAFT_1813 0.64 +0.5
1,913,832 - B158DRAFT_1813 0.64 -0.6
1,913,832 - B158DRAFT_1813 0.64 +0.2
1,913,837 - B158DRAFT_1813 0.64 -2.1
1,913,846 - B158DRAFT_1813 0.65 -0.6
1,913,854 + B158DRAFT_1813 0.66 +1.7
1,913,856 + B158DRAFT_1813 0.66 -0.8
1,913,864 - B158DRAFT_1813 0.67 -0.3
1,913,877 + B158DRAFT_1813 0.69 +0.0
1,913,883 + B158DRAFT_1813 0.70 -1.1
1,913,885 - B158DRAFT_1813 0.70 -0.4
1,913,891 - B158DRAFT_1813 0.71 -0.3
1,913,932 + B158DRAFT_1813 0.75 -0.9
1,913,937 + B158DRAFT_1813 0.76 -0.5
1,913,940 - B158DRAFT_1813 0.76 -1.8
1,913,940 - B158DRAFT_1813 0.76 -0.7
1,913,940 - B158DRAFT_1813 0.76 -1.0
1,914,014 - B158DRAFT_1813 0.85 -0.9
1,914,034 + B158DRAFT_1813 0.87 -0.2
1,914,041 - B158DRAFT_1813 0.88 -0.5
1,914,051 - B158DRAFT_1813 0.89 +1.3
1,914,095 + -1.8
1,914,095 + -0.2
1,914,095 + -0.5
1,914,095 + -2.3
1,914,103 - +0.3
1,914,103 - -1.2
1,914,103 - +0.1
1,914,103 - -1.6
1,914,103 - -1.6
1,914,104 + +0.3
1,914,123 - -0.2
1,914,127 + -1.6
1,914,135 - -1.4
1,914,188 - +0.5
1,914,203 - -0.5

Or see this region's nucleotide sequence