Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1798

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1797 and B158DRAFT_1798 are separated by 79 nucleotidesB158DRAFT_1798 and B158DRAFT_1799 are separated by 125 nucleotides B158DRAFT_1797: B158DRAFT_1797 - sodium/proton antiporter, CPA1 family (TC 2.A.36), at 1,891,150 to 1,893,021 _1797 B158DRAFT_1798: B158DRAFT_1798 - diguanylate cyclase (GGDEF) domain, at 1,893,101 to 1,895,113 _1798 B158DRAFT_1799: B158DRAFT_1799 - hypothetical protein, at 1,895,239 to 1,896,567 _1799 Position (kb) 1893 1894 1895 1896Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1892.116 kb on - strand, within B158DRAFT_1797at 1892.161 kb on - strand, within B158DRAFT_1797at 1892.220 kb on + strand, within B158DRAFT_1797at 1892.220 kb on + strand, within B158DRAFT_1797at 1892.228 kb on - strand, within B158DRAFT_1797at 1892.228 kb on - strand, within B158DRAFT_1797at 1892.240 kb on - strand, within B158DRAFT_1797at 1892.242 kb on + strand, within B158DRAFT_1797at 1892.250 kb on - strand, within B158DRAFT_1797at 1892.316 kb on + strand, within B158DRAFT_1797at 1892.318 kb on + strand, within B158DRAFT_1797at 1892.318 kb on + strand, within B158DRAFT_1797at 1892.318 kb on + strand, within B158DRAFT_1797at 1892.326 kb on - strand, within B158DRAFT_1797at 1892.326 kb on - strand, within B158DRAFT_1797at 1892.380 kb on - strand, within B158DRAFT_1797at 1892.487 kb on + strand, within B158DRAFT_1797at 1892.487 kb on + strand, within B158DRAFT_1797at 1892.487 kb on + strand, within B158DRAFT_1797at 1892.487 kb on + strand, within B158DRAFT_1797at 1892.487 kb on + strand, within B158DRAFT_1797at 1892.487 kb on + strand, within B158DRAFT_1797at 1892.487 kb on + strand, within B158DRAFT_1797at 1892.495 kb on - strand, within B158DRAFT_1797at 1892.495 kb on - strand, within B158DRAFT_1797at 1892.495 kb on - strand, within B158DRAFT_1797at 1892.495 kb on - strand, within B158DRAFT_1797at 1892.495 kb on - strand, within B158DRAFT_1797at 1892.495 kb on - strand, within B158DRAFT_1797at 1892.495 kb on - strand, within B158DRAFT_1797at 1892.558 kb on - strand, within B158DRAFT_1797at 1892.558 kb on - strand, within B158DRAFT_1797at 1892.560 kb on - strand, within B158DRAFT_1797at 1892.563 kb on + strand, within B158DRAFT_1797at 1892.565 kb on + strand, within B158DRAFT_1797at 1892.573 kb on + strand, within B158DRAFT_1797at 1892.573 kb on + strand, within B158DRAFT_1797at 1892.573 kb on + strand, within B158DRAFT_1797at 1892.573 kb on + strand, within B158DRAFT_1797at 1892.573 kb on + strand, within B158DRAFT_1797at 1892.573 kb on + strand, within B158DRAFT_1797at 1892.581 kb on - strand, within B158DRAFT_1797at 1892.581 kb on - strand, within B158DRAFT_1797at 1892.600 kb on + strand, within B158DRAFT_1797at 1892.631 kb on - strand, within B158DRAFT_1797at 1892.633 kb on + strand, within B158DRAFT_1797at 1892.837 kb on - strandat 1892.837 kb on - strandat 1892.852 kb on - strandat 1892.982 kb on + strandat 1893.025 kb on + strandat 1893.035 kb on + strandat 1893.054 kb on + strandat 1893.062 kb on - strandat 1893.062 kb on - strandat 1893.062 kb on - strandat 1893.150 kb on - strandat 1893.195 kb on + strandat 1893.200 kb on + strandat 1893.203 kb on - strandat 1893.240 kb on + strandat 1893.314 kb on + strand, within B158DRAFT_1798at 1893.322 kb on + strand, within B158DRAFT_1798at 1893.371 kb on + strand, within B158DRAFT_1798at 1893.371 kb on - strand, within B158DRAFT_1798at 1893.379 kb on - strand, within B158DRAFT_1798at 1893.627 kb on + strand, within B158DRAFT_1798at 1893.627 kb on + strand, within B158DRAFT_1798at 1893.737 kb on + strand, within B158DRAFT_1798at 1893.853 kb on + strand, within B158DRAFT_1798at 1893.923 kb on - strand, within B158DRAFT_1798at 1894.134 kb on - strand, within B158DRAFT_1798at 1894.187 kb on - strand, within B158DRAFT_1798at 1894.189 kb on + strand, within B158DRAFT_1798at 1894.197 kb on - strand, within B158DRAFT_1798at 1894.242 kb on - strand, within B158DRAFT_1798at 1894.283 kb on + strand, within B158DRAFT_1798at 1894.284 kb on + strand, within B158DRAFT_1798at 1894.297 kb on + strand, within B158DRAFT_1798at 1894.323 kb on + strand, within B158DRAFT_1798at 1894.443 kb on + strand, within B158DRAFT_1798at 1894.445 kb on - strand, within B158DRAFT_1798at 1894.544 kb on - strand, within B158DRAFT_1798at 1894.640 kb on - strand, within B158DRAFT_1798at 1894.641 kb on - strand, within B158DRAFT_1798at 1894.647 kb on - strand, within B158DRAFT_1798at 1894.721 kb on - strand, within B158DRAFT_1798at 1894.948 kb on - strandat 1894.987 kb on + strandat 1894.995 kb on - strandat 1894.996 kb on + strandat 1895.004 kb on - strandat 1895.004 kb on - strandat 1895.004 kb on - strandat 1895.121 kb on + strandat 1895.263 kb on + strandat 1895.264 kb on - strandat 1895.284 kb on + strandat 1895.290 kb on + strandat 1895.290 kb on - strandat 1895.290 kb on - strandat 1895.290 kb on - strandat 1895.431 kb on + strand, within B158DRAFT_1799at 1895.443 kb on + strand, within B158DRAFT_1799at 1895.449 kb on + strand, within B158DRAFT_1799at 1895.449 kb on - strand, within B158DRAFT_1799at 1895.451 kb on - strand, within B158DRAFT_1799at 1895.457 kb on - strand, within B158DRAFT_1799at 1895.470 kb on + strand, within B158DRAFT_1799at 1895.470 kb on + strand, within B158DRAFT_1799at 1895.470 kb on + strand, within B158DRAFT_1799at 1895.480 kb on + strand, within B158DRAFT_1799at 1895.483 kb on - strand, within B158DRAFT_1799at 1895.522 kb on + strand, within B158DRAFT_1799at 1895.530 kb on - strand, within B158DRAFT_1799at 1895.530 kb on - strand, within B158DRAFT_1799at 1895.567 kb on + strand, within B158DRAFT_1799at 1895.575 kb on - strand, within B158DRAFT_1799at 1895.583 kb on - strand, within B158DRAFT_1799at 1895.626 kb on + strand, within B158DRAFT_1799at 1895.634 kb on - strand, within B158DRAFT_1799at 1895.634 kb on - strand, within B158DRAFT_1799at 1895.634 kb on - strand, within B158DRAFT_1799at 1895.776 kb on + strand, within B158DRAFT_1799at 1895.828 kb on - strand, within B158DRAFT_1799at 1895.863 kb on + strand, within B158DRAFT_1799at 1895.863 kb on + strand, within B158DRAFT_1799at 1895.863 kb on + strand, within B158DRAFT_1799at 1895.871 kb on - strand, within B158DRAFT_1799at 1895.871 kb on - strand, within B158DRAFT_1799at 1895.871 kb on - strand, within B158DRAFT_1799at 1895.873 kb on + strand, within B158DRAFT_1799at 1895.891 kb on - strand, within B158DRAFT_1799at 1895.901 kb on + strand, within B158DRAFT_1799at 1895.901 kb on + strand, within B158DRAFT_1799at 1895.971 kb on + strand, within B158DRAFT_1799at 1895.986 kb on - strand, within B158DRAFT_1799at 1895.994 kb on + strand, within B158DRAFT_1799at 1896.060 kb on - strand, within B158DRAFT_1799at 1896.071 kb on - strand, within B158DRAFT_1799at 1896.092 kb on - strand, within B158DRAFT_1799at 1896.092 kb on - strand, within B158DRAFT_1799

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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1,892,116 - B158DRAFT_1797 0.52 -0.9
1,892,161 - B158DRAFT_1797 0.54 -1.1
1,892,220 + B158DRAFT_1797 0.57 -0.5
1,892,220 + B158DRAFT_1797 0.57 -1.1
1,892,228 - B158DRAFT_1797 0.58 +0.5
1,892,228 - B158DRAFT_1797 0.58 -0.9
1,892,240 - B158DRAFT_1797 0.58 -1.0
1,892,242 + B158DRAFT_1797 0.58 -0.1
1,892,250 - B158DRAFT_1797 0.59 -0.7
1,892,316 + B158DRAFT_1797 0.62 -1.4
1,892,318 + B158DRAFT_1797 0.62 -2.1
1,892,318 + B158DRAFT_1797 0.62 +0.3
1,892,318 + B158DRAFT_1797 0.62 -0.6
1,892,326 - B158DRAFT_1797 0.63 -0.1
1,892,326 - B158DRAFT_1797 0.63 +0.6
1,892,380 - B158DRAFT_1797 0.66 +1.1
1,892,487 + B158DRAFT_1797 0.71 +1.3
1,892,487 + B158DRAFT_1797 0.71 +0.6
1,892,487 + B158DRAFT_1797 0.71 +0.3
1,892,487 + B158DRAFT_1797 0.71 -1.2
1,892,487 + B158DRAFT_1797 0.71 -1.3
1,892,487 + B158DRAFT_1797 0.71 -1.7
1,892,487 + B158DRAFT_1797 0.71 -1.6
1,892,495 - B158DRAFT_1797 0.72 -0.1
1,892,495 - B158DRAFT_1797 0.72 -1.1
1,892,495 - B158DRAFT_1797 0.72 +0.7
1,892,495 - B158DRAFT_1797 0.72 -0.5
1,892,495 - B158DRAFT_1797 0.72 -0.2
1,892,495 - B158DRAFT_1797 0.72 -0.2
1,892,495 - B158DRAFT_1797 0.72 -1.1
1,892,558 - B158DRAFT_1797 0.75 -1.3
1,892,558 - B158DRAFT_1797 0.75 +0.8
1,892,560 - B158DRAFT_1797 0.75 -0.9
1,892,563 + B158DRAFT_1797 0.75 -0.8
1,892,565 + B158DRAFT_1797 0.76 -0.7
1,892,573 + B158DRAFT_1797 0.76 +0.6
1,892,573 + B158DRAFT_1797 0.76 -0.1
1,892,573 + B158DRAFT_1797 0.76 +2.5
1,892,573 + B158DRAFT_1797 0.76 -0.1
1,892,573 + B158DRAFT_1797 0.76 -1.1
1,892,573 + B158DRAFT_1797 0.76 -3.3
1,892,581 - B158DRAFT_1797 0.76 -1.6
1,892,581 - B158DRAFT_1797 0.76 -0.5
1,892,600 + B158DRAFT_1797 0.77 -1.0
1,892,631 - B158DRAFT_1797 0.79 -0.6
1,892,633 + B158DRAFT_1797 0.79 -0.5
1,892,837 - -0.0
1,892,837 - +0.0
1,892,852 - -1.0
1,892,982 + -0.7
1,893,025 + +0.6
1,893,035 + +0.1
1,893,054 + -1.3
1,893,062 - -0.1
1,893,062 - -0.7
1,893,062 - -0.7
1,893,150 - +0.7
1,893,195 + -0.1
1,893,200 + +0.2
1,893,203 - -0.9
1,893,240 + +0.2
1,893,314 + B158DRAFT_1798 0.11 +1.7
1,893,322 + B158DRAFT_1798 0.11 -0.4
1,893,371 + B158DRAFT_1798 0.13 -0.6
1,893,371 - B158DRAFT_1798 0.13 +1.0
1,893,379 - B158DRAFT_1798 0.14 -3.0
1,893,627 + B158DRAFT_1798 0.26 -0.7
1,893,627 + B158DRAFT_1798 0.26 -0.3
1,893,737 + B158DRAFT_1798 0.32 -0.1
1,893,853 + B158DRAFT_1798 0.37 +0.3
1,893,923 - B158DRAFT_1798 0.41 -1.1
1,894,134 - B158DRAFT_1798 0.51 -0.5
1,894,187 - B158DRAFT_1798 0.54 -0.0
1,894,189 + B158DRAFT_1798 0.54 +1.6
1,894,197 - B158DRAFT_1798 0.54 -2.9
1,894,242 - B158DRAFT_1798 0.57 +0.8
1,894,283 + B158DRAFT_1798 0.59 -1.8
1,894,284 + B158DRAFT_1798 0.59 -1.1
1,894,297 + B158DRAFT_1798 0.59 -1.3
1,894,323 + B158DRAFT_1798 0.61 -1.3
1,894,443 + B158DRAFT_1798 0.67 +0.0
1,894,445 - B158DRAFT_1798 0.67 +0.3
1,894,544 - B158DRAFT_1798 0.72 +0.7
1,894,640 - B158DRAFT_1798 0.76 +0.3
1,894,641 - B158DRAFT_1798 0.77 -0.4
1,894,647 - B158DRAFT_1798 0.77 +0.4
1,894,721 - B158DRAFT_1798 0.80 +0.6
1,894,948 - +0.6
1,894,987 + +0.7
1,894,995 - +0.3
1,894,996 + -1.1
1,895,004 - -0.1
1,895,004 - -0.8
1,895,004 - +0.6
1,895,121 + -0.1
1,895,263 + -0.5
1,895,264 - -1.6
1,895,284 + -0.1
1,895,290 + -1.0
1,895,290 - -1.0
1,895,290 - +2.0
1,895,290 - +0.5
1,895,431 + B158DRAFT_1799 0.14 -1.0
1,895,443 + B158DRAFT_1799 0.15 +1.0
1,895,449 + B158DRAFT_1799 0.16 -0.3
1,895,449 - B158DRAFT_1799 0.16 +1.3
1,895,451 - B158DRAFT_1799 0.16 -1.1
1,895,457 - B158DRAFT_1799 0.16 +0.1
1,895,470 + B158DRAFT_1799 0.17 -0.5
1,895,470 + B158DRAFT_1799 0.17 +0.3
1,895,470 + B158DRAFT_1799 0.17 -2.0
1,895,480 + B158DRAFT_1799 0.18 -1.5
1,895,483 - B158DRAFT_1799 0.18 +0.9
1,895,522 + B158DRAFT_1799 0.21 -1.3
1,895,530 - B158DRAFT_1799 0.22 -0.1
1,895,530 - B158DRAFT_1799 0.22 -0.8
1,895,567 + B158DRAFT_1799 0.25 +1.0
1,895,575 - B158DRAFT_1799 0.25 -1.7
1,895,583 - B158DRAFT_1799 0.26 -0.3
1,895,626 + B158DRAFT_1799 0.29 -1.7
1,895,634 - B158DRAFT_1799 0.30 -0.3
1,895,634 - B158DRAFT_1799 0.30 -2.2
1,895,634 - B158DRAFT_1799 0.30 -1.9
1,895,776 + B158DRAFT_1799 0.40 +3.3
1,895,828 - B158DRAFT_1799 0.44 +0.4
1,895,863 + B158DRAFT_1799 0.47 -0.1
1,895,863 + B158DRAFT_1799 0.47 +0.4
1,895,863 + B158DRAFT_1799 0.47 -1.5
1,895,871 - B158DRAFT_1799 0.48 -0.2
1,895,871 - B158DRAFT_1799 0.48 -1.0
1,895,871 - B158DRAFT_1799 0.48 -0.7
1,895,873 + B158DRAFT_1799 0.48 -0.5
1,895,891 - B158DRAFT_1799 0.49 -0.5
1,895,901 + B158DRAFT_1799 0.50 +0.5
1,895,901 + B158DRAFT_1799 0.50 -2.7
1,895,971 + B158DRAFT_1799 0.55 -0.3
1,895,986 - B158DRAFT_1799 0.56 +0.8
1,895,994 + B158DRAFT_1799 0.57 -1.2
1,896,060 - B158DRAFT_1799 0.62 -0.7
1,896,071 - B158DRAFT_1799 0.63 -2.0
1,896,092 - B158DRAFT_1799 0.64 -1.5
1,896,092 - B158DRAFT_1799 0.64 -0.8

Or see this region's nucleotide sequence