Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1774

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1773 and B158DRAFT_1774 are separated by 29 nucleotidesB158DRAFT_1774 and B158DRAFT_1775 are separated by 31 nucleotides B158DRAFT_1773: B158DRAFT_1773 - DNA ligase, NAD-dependent, at 1,856,946 to 1,858,961 _1773 B158DRAFT_1774: B158DRAFT_1774 - cell division protein ZipA, at 1,858,991 to 1,860,016 _1774 B158DRAFT_1775: B158DRAFT_1775 - condensin subunit Smc, at 1,860,048 to 1,863,545 _1775 Position (kb) 1858 1859 1860 1861Strain fitness (log2 ratio) -1 0 1 2 3 4 5 6 7 8 9 10at 1859.186 kb on - strand, within B158DRAFT_1774at 1859.186 kb on - strand, within B158DRAFT_1774at 1859.186 kb on - strand, within B158DRAFT_1774at 1859.249 kb on - strand, within B158DRAFT_1774at 1859.250 kb on - strand, within B158DRAFT_1774at 1859.272 kb on - strand, within B158DRAFT_1774at 1859.378 kb on - strand, within B158DRAFT_1774at 1859.498 kb on - strand, within B158DRAFT_1774at 1859.498 kb on - strand, within B158DRAFT_1774at 1859.549 kb on - strand, within B158DRAFT_1774at 1860.258 kb on - strandat 1860.489 kb on - strand, within B158DRAFT_1775at 1860.630 kb on - strand, within B158DRAFT_1775at 1860.857 kb on - strand, within B158DRAFT_1775

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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1,859,186 - B158DRAFT_1774 0.19 +8.2
1,859,186 - B158DRAFT_1774 0.19 +8.2
1,859,186 - B158DRAFT_1774 0.19 +9.6
1,859,249 - B158DRAFT_1774 0.25 +9.1
1,859,250 - B158DRAFT_1774 0.25 +10.0
1,859,272 - B158DRAFT_1774 0.27 +9.4
1,859,378 - B158DRAFT_1774 0.38 +9.3
1,859,498 - B158DRAFT_1774 0.49 +9.7
1,859,498 - B158DRAFT_1774 0.49 +9.4
1,859,549 - B158DRAFT_1774 0.54 +9.6
1,860,258 - +3.2
1,860,489 - B158DRAFT_1775 0.13 +1.5
1,860,630 - B158DRAFT_1775 0.17 +2.6
1,860,857 - B158DRAFT_1775 0.23 +4.3

Or see this region's nucleotide sequence