Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1341 and B158DRAFT_1342 are separated by 179 nucleotides B158DRAFT_1342 and B158DRAFT_1343 are separated by 371 nucleotides
B158DRAFT_1341: B158DRAFT_1341 - aminodeoxychorismate synthase, component I, bacterial clade, at 1,382,626 to 1,384,044
_1341
B158DRAFT_1342: B158DRAFT_1342 - fumarase, class I, homodimeric (EC 4.2.1.2), at 1,384,224 to 1,385,729
_1342
B158DRAFT_1343: B158DRAFT_1343 - methylisocitrate lyase, at 1,386,101 to 1,386,985
_1343
Position (kb)
1384
1385
1386 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1383.380 kb on - strand, within B158DRAFT_1341 at 1383.395 kb on - strand, within B158DRAFT_1341 at 1383.417 kb on + strand, within B158DRAFT_1341 at 1383.417 kb on + strand, within B158DRAFT_1341 at 1383.422 kb on + strand, within B158DRAFT_1341 at 1383.425 kb on - strand, within B158DRAFT_1341 at 1383.430 kb on - strand, within B158DRAFT_1341 at 1383.698 kb on - strand, within B158DRAFT_1341 at 1383.765 kb on + strand, within B158DRAFT_1341 at 1383.805 kb on + strand, within B158DRAFT_1341 at 1383.805 kb on + strand, within B158DRAFT_1341 at 1383.805 kb on + strand, within B158DRAFT_1341 at 1383.805 kb on + strand, within B158DRAFT_1341 at 1383.813 kb on - strand, within B158DRAFT_1341 at 1383.818 kb on + strand, within B158DRAFT_1341 at 1383.818 kb on + strand, within B158DRAFT_1341 at 1383.818 kb on + strand, within B158DRAFT_1341 at 1383.826 kb on - strand, within B158DRAFT_1341 at 1383.894 kb on + strand, within B158DRAFT_1341 at 1383.894 kb on + strand, within B158DRAFT_1341 at 1383.902 kb on - strand, within B158DRAFT_1341 at 1383.902 kb on - strand, within B158DRAFT_1341 at 1383.944 kb on + strand at 1383.949 kb on + strand at 1383.952 kb on - strand at 1383.957 kb on - strand at 1383.979 kb on + strand at 1383.979 kb on + strand at 1383.986 kb on + strand at 1383.992 kb on - strand at 1384.000 kb on - strand at 1384.136 kb on - strand at 1384.178 kb on + strand at 1384.178 kb on + strand at 1384.191 kb on + strand at 1384.213 kb on + strand at 1385.692 kb on - strand at 1385.692 kb on - strand at 1385.703 kb on + strand at 1385.705 kb on + strand at 1385.713 kb on - strand at 1385.830 kb on + strand at 1385.901 kb on - strand at 1385.951 kb on + strand at 1386.000 kb on - strand at 1386.180 kb on - strand at 1386.289 kb on - strand, within B158DRAFT_1343 at 1386.320 kb on - strand, within B158DRAFT_1343 at 1386.327 kb on - strand, within B158DRAFT_1343 at 1386.364 kb on - strand, within B158DRAFT_1343 at 1386.364 kb on - strand, within B158DRAFT_1343 at 1386.592 kb on - strand, within B158DRAFT_1343 at 1386.604 kb on - strand, within B158DRAFT_1343 at 1386.671 kb on - strand, within B158DRAFT_1343
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol% remove 1,383,380 - B158DRAFT_1341 0.53 +2.6 1,383,395 - B158DRAFT_1341 0.54 -0.2 1,383,417 + B158DRAFT_1341 0.56 +0.4 1,383,417 + B158DRAFT_1341 0.56 +0.6 1,383,422 + B158DRAFT_1341 0.56 +0.1 1,383,425 - B158DRAFT_1341 0.56 -0.2 1,383,430 - B158DRAFT_1341 0.57 -1.4 1,383,698 - B158DRAFT_1341 0.76 +0.0 1,383,765 + B158DRAFT_1341 0.80 +0.3 1,383,805 + B158DRAFT_1341 0.83 +1.2 1,383,805 + B158DRAFT_1341 0.83 -1.0 1,383,805 + B158DRAFT_1341 0.83 -0.5 1,383,805 + B158DRAFT_1341 0.83 -0.7 1,383,813 - B158DRAFT_1341 0.84 -1.0 1,383,818 + B158DRAFT_1341 0.84 -1.2 1,383,818 + B158DRAFT_1341 0.84 +0.4 1,383,818 + B158DRAFT_1341 0.84 -0.0 1,383,826 - B158DRAFT_1341 0.85 +0.8 1,383,894 + B158DRAFT_1341 0.89 +1.9 1,383,894 + B158DRAFT_1341 0.89 +1.6 1,383,902 - B158DRAFT_1341 0.90 +0.5 1,383,902 - B158DRAFT_1341 0.90 -0.3 1,383,944 + -0.5 1,383,949 + -0.4 1,383,952 - -0.3 1,383,957 - -1.3 1,383,979 + +1.0 1,383,979 + +2.5 1,383,986 + +0.7 1,383,992 - +0.4 1,384,000 - +1.9 1,384,136 - -0.8 1,384,178 + +0.2 1,384,178 + -1.5 1,384,191 + -0.2 1,384,213 + +1.3 1,385,692 - +0.9 1,385,692 - +0.9 1,385,703 + -0.1 1,385,705 + +1.0 1,385,713 - -1.1 1,385,830 + +0.1 1,385,901 - -1.7 1,385,951 + -1.2 1,386,000 - -0.7 1,386,180 - -0.2 1,386,289 - B158DRAFT_1343 0.21 +1.6 1,386,320 - B158DRAFT_1343 0.25 -2.1 1,386,327 - B158DRAFT_1343 0.26 +1.3 1,386,364 - B158DRAFT_1343 0.30 -0.5 1,386,364 - B158DRAFT_1343 0.30 +2.0 1,386,592 - B158DRAFT_1343 0.55 +0.9 1,386,604 - B158DRAFT_1343 0.57 +0.5 1,386,671 - B158DRAFT_1343 0.64 +0.7
Or see this region's nucleotide sequence