Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1168

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1167 and B158DRAFT_1168 are separated by 137 nucleotidesB158DRAFT_1168 and B158DRAFT_1169 overlap by 4 nucleotides B158DRAFT_1167: B158DRAFT_1167 - Leucyl aminopeptidase, at 1,206,672 to 1,208,162 _1167 B158DRAFT_1168: B158DRAFT_1168 - Predicted permeases, at 1,208,300 to 1,209,415 _1168 B158DRAFT_1169: B158DRAFT_1169 - Predicted permeases, at 1,209,412 to 1,210,476 _1169 Position (kb) 1208 1209 1210Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1207.322 kb on + strand, within B158DRAFT_1167at 1207.330 kb on - strand, within B158DRAFT_1167at 1207.409 kb on - strand, within B158DRAFT_1167at 1207.409 kb on - strand, within B158DRAFT_1167at 1207.409 kb on - strand, within B158DRAFT_1167at 1207.433 kb on + strand, within B158DRAFT_1167at 1207.441 kb on - strand, within B158DRAFT_1167at 1207.441 kb on - strand, within B158DRAFT_1167at 1207.476 kb on - strand, within B158DRAFT_1167at 1207.494 kb on + strand, within B158DRAFT_1167at 1207.499 kb on + strand, within B158DRAFT_1167at 1207.507 kb on - strand, within B158DRAFT_1167at 1207.516 kb on + strand, within B158DRAFT_1167at 1207.534 kb on - strand, within B158DRAFT_1167at 1207.554 kb on - strand, within B158DRAFT_1167at 1207.566 kb on + strand, within B158DRAFT_1167at 1207.615 kb on + strand, within B158DRAFT_1167at 1207.615 kb on + strand, within B158DRAFT_1167at 1207.739 kb on - strand, within B158DRAFT_1167at 1207.744 kb on + strand, within B158DRAFT_1167at 1207.748 kb on + strand, within B158DRAFT_1167at 1207.756 kb on - strand, within B158DRAFT_1167at 1207.756 kb on - strand, within B158DRAFT_1167at 1207.841 kb on + strand, within B158DRAFT_1167at 1207.841 kb on + strand, within B158DRAFT_1167at 1207.849 kb on - strand, within B158DRAFT_1167at 1207.920 kb on - strand, within B158DRAFT_1167at 1207.954 kb on + strand, within B158DRAFT_1167at 1208.030 kb on + strandat 1208.034 kb on + strandat 1208.034 kb on + strandat 1208.034 kb on + strandat 1208.034 kb on + strandat 1208.034 kb on + strandat 1208.034 kb on + strandat 1208.042 kb on - strandat 1208.042 kb on - strandat 1208.042 kb on - strandat 1208.042 kb on - strandat 1208.042 kb on - strandat 1208.042 kb on - strandat 1208.258 kb on + strandat 1208.258 kb on + strandat 1208.266 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
remove
1,207,322 + B158DRAFT_1167 0.44 +2.1
1,207,330 - B158DRAFT_1167 0.44 +0.1
1,207,409 - B158DRAFT_1167 0.49 +2.4
1,207,409 - B158DRAFT_1167 0.49 +1.0
1,207,409 - B158DRAFT_1167 0.49 +0.9
1,207,433 + B158DRAFT_1167 0.51 +3.3
1,207,441 - B158DRAFT_1167 0.52 +1.1
1,207,441 - B158DRAFT_1167 0.52 +0.8
1,207,476 - B158DRAFT_1167 0.54 +1.1
1,207,494 + B158DRAFT_1167 0.55 -1.0
1,207,499 + B158DRAFT_1167 0.55 +1.2
1,207,507 - B158DRAFT_1167 0.56 +1.2
1,207,516 + B158DRAFT_1167 0.57 +2.3
1,207,534 - B158DRAFT_1167 0.58 +1.1
1,207,554 - B158DRAFT_1167 0.59 -2.1
1,207,566 + B158DRAFT_1167 0.60 +0.4
1,207,615 + B158DRAFT_1167 0.63 +0.9
1,207,615 + B158DRAFT_1167 0.63 +0.5
1,207,739 - B158DRAFT_1167 0.72 +0.8
1,207,744 + B158DRAFT_1167 0.72 -0.2
1,207,748 + B158DRAFT_1167 0.72 +0.8
1,207,756 - B158DRAFT_1167 0.73 +1.5
1,207,756 - B158DRAFT_1167 0.73 +0.7
1,207,841 + B158DRAFT_1167 0.78 -1.1
1,207,841 + B158DRAFT_1167 0.78 -0.5
1,207,849 - B158DRAFT_1167 0.79 +2.0
1,207,920 - B158DRAFT_1167 0.84 +1.2
1,207,954 + B158DRAFT_1167 0.86 +0.7
1,208,030 + -0.4
1,208,034 + +1.9
1,208,034 + +0.9
1,208,034 + +0.3
1,208,034 + -0.0
1,208,034 + +1.3
1,208,034 + +0.9
1,208,042 - -1.1
1,208,042 - -1.9
1,208,042 - +0.9
1,208,042 - +0.6
1,208,042 - +0.1
1,208,042 - +1.7
1,208,258 + -0.4
1,208,258 + +0.4
1,208,266 + +1.4

Or see this region's nucleotide sequence