Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1152

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1151 and B158DRAFT_1152 are separated by 47 nucleotidesB158DRAFT_1152 and B158DRAFT_1153 are separated by 110 nucleotides B158DRAFT_1151: B158DRAFT_1151 - Uncharacterized protein conserved in bacteria, at 1,186,827 to 1,187,777 _1151 B158DRAFT_1152: B158DRAFT_1152 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.4.3), at 1,187,825 to 1,188,964 _1152 B158DRAFT_1153: B158DRAFT_1153 - histidyl-tRNA synthetase (EC 6.1.1.21), at 1,189,075 to 1,190,346 _1153 Position (kb) 1187 1188 1189Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1186.900 kb on - strandat 1186.968 kb on + strand, within B158DRAFT_1151at 1186.987 kb on + strand, within B158DRAFT_1151at 1186.987 kb on + strand, within B158DRAFT_1151at 1186.987 kb on + strand, within B158DRAFT_1151at 1186.987 kb on + strand, within B158DRAFT_1151at 1186.995 kb on - strand, within B158DRAFT_1151at 1187.183 kb on - strand, within B158DRAFT_1151at 1187.264 kb on - strand, within B158DRAFT_1151at 1187.299 kb on - strand, within B158DRAFT_1151at 1187.301 kb on + strand, within B158DRAFT_1151at 1187.301 kb on + strand, within B158DRAFT_1151at 1187.359 kb on + strand, within B158DRAFT_1151at 1187.359 kb on + strand, within B158DRAFT_1151at 1187.361 kb on + strand, within B158DRAFT_1151at 1187.367 kb on - strand, within B158DRAFT_1151at 1187.369 kb on - strand, within B158DRAFT_1151at 1187.373 kb on + strand, within B158DRAFT_1151at 1187.385 kb on + strand, within B158DRAFT_1151at 1187.388 kb on - strand, within B158DRAFT_1151at 1187.395 kb on + strand, within B158DRAFT_1151at 1187.395 kb on + strand, within B158DRAFT_1151at 1187.395 kb on + strand, within B158DRAFT_1151at 1187.395 kb on + strand, within B158DRAFT_1151at 1187.395 kb on + strand, within B158DRAFT_1151at 1187.396 kb on - strand, within B158DRAFT_1151at 1187.403 kb on - strand, within B158DRAFT_1151at 1187.403 kb on - strand, within B158DRAFT_1151at 1187.403 kb on - strand, within B158DRAFT_1151at 1187.403 kb on - strand, within B158DRAFT_1151at 1187.408 kb on - strand, within B158DRAFT_1151at 1187.428 kb on + strand, within B158DRAFT_1151at 1187.436 kb on - strand, within B158DRAFT_1151at 1187.442 kb on - strand, within B158DRAFT_1151at 1187.519 kb on + strand, within B158DRAFT_1151at 1187.519 kb on + strand, within B158DRAFT_1151at 1187.519 kb on + strand, within B158DRAFT_1151at 1187.527 kb on - strand, within B158DRAFT_1151at 1187.527 kb on - strand, within B158DRAFT_1151at 1187.527 kb on - strand, within B158DRAFT_1151at 1187.552 kb on - strand, within B158DRAFT_1151at 1187.552 kb on - strand, within B158DRAFT_1151at 1187.581 kb on + strand, within B158DRAFT_1151at 1187.581 kb on + strand, within B158DRAFT_1151at 1187.589 kb on - strand, within B158DRAFT_1151at 1187.653 kb on + strand, within B158DRAFT_1151at 1187.661 kb on - strand, within B158DRAFT_1151at 1187.661 kb on - strand, within B158DRAFT_1151at 1187.684 kb on + strandat 1187.684 kb on + strandat 1187.684 kb on + strandat 1187.686 kb on - strandat 1187.692 kb on - strandat 1187.692 kb on - strandat 1187.692 kb on - strandat 1187.692 kb on - strandat 1187.692 kb on - strandat 1187.707 kb on + strandat 1187.757 kb on + strandat 1187.785 kb on + strandat 1187.785 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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1,186,900 - -0.5
1,186,968 + B158DRAFT_1151 0.15 -1.9
1,186,987 + B158DRAFT_1151 0.17 -0.7
1,186,987 + B158DRAFT_1151 0.17 -1.1
1,186,987 + B158DRAFT_1151 0.17 +0.2
1,186,987 + B158DRAFT_1151 0.17 +0.6
1,186,995 - B158DRAFT_1151 0.18 -1.8
1,187,183 - B158DRAFT_1151 0.37 -1.5
1,187,264 - B158DRAFT_1151 0.46 -2.7
1,187,299 - B158DRAFT_1151 0.50 -3.9
1,187,301 + B158DRAFT_1151 0.50 -0.1
1,187,301 + B158DRAFT_1151 0.50 -1.8
1,187,359 + B158DRAFT_1151 0.56 +0.9
1,187,359 + B158DRAFT_1151 0.56 -0.2
1,187,361 + B158DRAFT_1151 0.56 -2.2
1,187,367 - B158DRAFT_1151 0.57 -0.5
1,187,369 - B158DRAFT_1151 0.57 -0.5
1,187,373 + B158DRAFT_1151 0.57 -3.1
1,187,385 + B158DRAFT_1151 0.59 -0.2
1,187,388 - B158DRAFT_1151 0.59 -1.0
1,187,395 + B158DRAFT_1151 0.60 -1.8
1,187,395 + B158DRAFT_1151 0.60 +0.2
1,187,395 + B158DRAFT_1151 0.60 -0.2
1,187,395 + B158DRAFT_1151 0.60 -1.3
1,187,395 + B158DRAFT_1151 0.60 -2.4
1,187,396 - B158DRAFT_1151 0.60 -0.7
1,187,403 - B158DRAFT_1151 0.61 -2.2
1,187,403 - B158DRAFT_1151 0.61 -2.5
1,187,403 - B158DRAFT_1151 0.61 -2.5
1,187,403 - B158DRAFT_1151 0.61 -0.0
1,187,408 - B158DRAFT_1151 0.61 +1.3
1,187,428 + B158DRAFT_1151 0.63 -1.0
1,187,436 - B158DRAFT_1151 0.64 -0.7
1,187,442 - B158DRAFT_1151 0.65 -0.7
1,187,519 + B158DRAFT_1151 0.73 +0.4
1,187,519 + B158DRAFT_1151 0.73 +0.4
1,187,519 + B158DRAFT_1151 0.73 -3.0
1,187,527 - B158DRAFT_1151 0.74 -1.6
1,187,527 - B158DRAFT_1151 0.74 -2.7
1,187,527 - B158DRAFT_1151 0.74 -0.8
1,187,552 - B158DRAFT_1151 0.76 +1.8
1,187,552 - B158DRAFT_1151 0.76 -1.0
1,187,581 + B158DRAFT_1151 0.79 -2.3
1,187,581 + B158DRAFT_1151 0.79 -2.2
1,187,589 - B158DRAFT_1151 0.80 -0.7
1,187,653 + B158DRAFT_1151 0.87 -1.7
1,187,661 - B158DRAFT_1151 0.88 -1.6
1,187,661 - B158DRAFT_1151 0.88 -0.1
1,187,684 + -0.1
1,187,684 + -0.9
1,187,684 + -0.6
1,187,686 - -0.7
1,187,692 - +1.2
1,187,692 - +1.8
1,187,692 - -2.5
1,187,692 - +0.3
1,187,692 - -1.8
1,187,707 + -1.5
1,187,757 + -0.4
1,187,785 + +1.6
1,187,785 + -1.5

Or see this region's nucleotide sequence