Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0908

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0907 and B158DRAFT_0908 are separated by 73 nucleotidesB158DRAFT_0908 and B158DRAFT_0909 are separated by 375 nucleotides B158DRAFT_0907: B158DRAFT_0907 - Predicted integral membrane protein, at 930,327 to 931,634 _0907 B158DRAFT_0908: B158DRAFT_0908 - Uncharacterized protein conserved in bacteria containing a pentein-type domain, at 931,708 to 932,748 _0908 B158DRAFT_0909: B158DRAFT_0909 - Transcriptional regulator, at 933,124 to 934,029 _0909 Position (kb) 931 932 933Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7at 930.756 kb on + strand, within B158DRAFT_0907at 930.758 kb on + strand, within B158DRAFT_0907at 930.766 kb on - strand, within B158DRAFT_0907at 930.766 kb on - strand, within B158DRAFT_0907at 930.781 kb on - strand, within B158DRAFT_0907at 930.781 kb on - strand, within B158DRAFT_0907at 930.786 kb on - strand, within B158DRAFT_0907at 930.793 kb on + strand, within B158DRAFT_0907at 930.801 kb on - strand, within B158DRAFT_0907at 930.820 kb on + strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.833 kb on - strand, within B158DRAFT_0907at 930.847 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.859 kb on + strand, within B158DRAFT_0907at 930.867 kb on - strand, within B158DRAFT_0907at 930.867 kb on - strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.869 kb on + strand, within B158DRAFT_0907at 930.877 kb on - strand, within B158DRAFT_0907at 930.877 kb on - strand, within B158DRAFT_0907at 930.877 kb on - strand, within B158DRAFT_0907at 930.965 kb on + strand, within B158DRAFT_0907at 930.985 kb on + strand, within B158DRAFT_0907at 930.985 kb on + strand, within B158DRAFT_0907at 930.985 kb on + strand, within B158DRAFT_0907at 931.093 kb on + strand, within B158DRAFT_0907at 931.159 kb on - strand, within B158DRAFT_0907at 931.217 kb on + strand, within B158DRAFT_0907at 931.230 kb on - strand, within B158DRAFT_0907at 931.250 kb on + strand, within B158DRAFT_0907at 931.307 kb on - strand, within B158DRAFT_0907at 931.441 kb on - strand, within B158DRAFT_0907at 931.501 kb on + strand, within B158DRAFT_0907at 931.605 kb on + strandat 931.622 kb on + strandat 931.790 kb on + strandat 931.840 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.932 kb on + strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.940 kb on - strand, within B158DRAFT_0908at 931.968 kb on + strand, within B158DRAFT_0908at 931.976 kb on + strand, within B158DRAFT_0908at 931.976 kb on - strand, within B158DRAFT_0908at 932.071 kb on + strand, within B158DRAFT_0908at 932.116 kb on + strand, within B158DRAFT_0908at 932.124 kb on - strand, within B158DRAFT_0908at 932.124 kb on - strand, within B158DRAFT_0908at 932.236 kb on - strand, within B158DRAFT_0908at 932.310 kb on + strand, within B158DRAFT_0908at 932.351 kb on + strand, within B158DRAFT_0908at 932.358 kb on + strand, within B158DRAFT_0908at 932.358 kb on + strand, within B158DRAFT_0908at 932.358 kb on + strand, within B158DRAFT_0908at 932.398 kb on + strand, within B158DRAFT_0908at 932.430 kb on + strand, within B158DRAFT_0908at 932.445 kb on - strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.517 kb on + strand, within B158DRAFT_0908at 932.525 kb on - strand, within B158DRAFT_0908at 932.525 kb on - strand, within B158DRAFT_0908at 932.525 kb on - strand, within B158DRAFT_0908at 932.533 kb on + strand, within B158DRAFT_0908at 932.621 kb on - strand, within B158DRAFT_0908at 932.746 kb on + strandat 932.800 kb on - strandat 932.851 kb on + strandat 932.857 kb on + strandat 932.857 kb on + strandat 932.859 kb on - strandat 932.865 kb on - strandat 932.954 kb on - strandat 933.029 kb on + strandat 933.126 kb on + strandat 933.134 kb on - strandat 933.134 kb on - strandat 933.134 kb on - strandat 933.134 kb on - strandat 933.134 kb on - strandat 933.142 kb on - strandat 933.152 kb on + strandat 933.189 kb on - strandat 933.321 kb on - strand, within B158DRAFT_0909at 933.368 kb on + strand, within B158DRAFT_0909at 933.381 kb on + strand, within B158DRAFT_0909at 933.389 kb on - strand, within B158DRAFT_0909at 933.389 kb on - strand, within B158DRAFT_0909at 933.389 kb on - strand, within B158DRAFT_0909at 933.389 kb on - strand, within B158DRAFT_0909at 933.460 kb on - strand, within B158DRAFT_0909at 933.571 kb on + strand, within B158DRAFT_0909at 933.665 kb on + strand, within B158DRAFT_0909at 933.673 kb on - strand, within B158DRAFT_0909at 933.737 kb on + strand, within B158DRAFT_0909

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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930,756 + B158DRAFT_0907 0.33 +2.7
930,758 + B158DRAFT_0907 0.33 -0.1
930,766 - B158DRAFT_0907 0.34 +0.8
930,766 - B158DRAFT_0907 0.34 +0.2
930,781 - B158DRAFT_0907 0.35 -0.6
930,781 - B158DRAFT_0907 0.35 +0.4
930,786 - B158DRAFT_0907 0.35 -1.0
930,793 + B158DRAFT_0907 0.36 +1.5
930,801 - B158DRAFT_0907 0.36 +1.5
930,820 + B158DRAFT_0907 0.38 +1.8
930,833 - B158DRAFT_0907 0.39 +2.1
930,833 - B158DRAFT_0907 0.39 +1.4
930,833 - B158DRAFT_0907 0.39 -0.7
930,833 - B158DRAFT_0907 0.39 +2.0
930,847 + B158DRAFT_0907 0.40 -0.5
930,859 + B158DRAFT_0907 0.41 +0.8
930,859 + B158DRAFT_0907 0.41 +0.1
930,859 + B158DRAFT_0907 0.41 +1.2
930,859 + B158DRAFT_0907 0.41 +0.7
930,867 - B158DRAFT_0907 0.41 -0.1
930,867 - B158DRAFT_0907 0.41 +0.9
930,869 + B158DRAFT_0907 0.41 -0.1
930,869 + B158DRAFT_0907 0.41 +0.6
930,869 + B158DRAFT_0907 0.41 +1.3
930,869 + B158DRAFT_0907 0.41 +1.6
930,877 - B158DRAFT_0907 0.42 +1.3
930,877 - B158DRAFT_0907 0.42 -0.7
930,877 - B158DRAFT_0907 0.42 +0.7
930,965 + B158DRAFT_0907 0.49 +0.4
930,985 + B158DRAFT_0907 0.50 +1.0
930,985 + B158DRAFT_0907 0.50 -0.3
930,985 + B158DRAFT_0907 0.50 +1.3
931,093 + B158DRAFT_0907 0.59 +0.7
931,159 - B158DRAFT_0907 0.64 +2.4
931,217 + B158DRAFT_0907 0.68 -0.0
931,230 - B158DRAFT_0907 0.69 +0.7
931,250 + B158DRAFT_0907 0.71 +0.9
931,307 - B158DRAFT_0907 0.75 -0.3
931,441 - B158DRAFT_0907 0.85 +1.1
931,501 + B158DRAFT_0907 0.90 +0.6
931,605 + +1.0
931,622 + +0.5
931,790 + +1.6
931,840 + B158DRAFT_0908 0.13 +0.2
931,932 + B158DRAFT_0908 0.22 +1.9
931,932 + B158DRAFT_0908 0.22 -0.2
931,932 + B158DRAFT_0908 0.22 -2.0
931,932 + B158DRAFT_0908 0.22 +0.3
931,932 + B158DRAFT_0908 0.22 -0.6
931,932 + B158DRAFT_0908 0.22 -0.4
931,932 + B158DRAFT_0908 0.22 -1.7
931,932 + B158DRAFT_0908 0.22 +1.2
931,932 + B158DRAFT_0908 0.22 -0.9
931,932 + B158DRAFT_0908 0.22 -0.6
931,932 + B158DRAFT_0908 0.22 +0.1
931,932 + B158DRAFT_0908 0.22 +0.9
931,932 + B158DRAFT_0908 0.22 -1.8
931,932 + B158DRAFT_0908 0.22 +0.1
931,932 + B158DRAFT_0908 0.22 -2.3
931,932 + B158DRAFT_0908 0.22 +0.4
931,932 + B158DRAFT_0908 0.22 +0.1
931,932 + B158DRAFT_0908 0.22 -1.9
931,932 + B158DRAFT_0908 0.22 +0.2
931,932 + B158DRAFT_0908 0.22 -2.4
931,932 + B158DRAFT_0908 0.22 +0.7
931,932 + B158DRAFT_0908 0.22 -0.8
931,932 + B158DRAFT_0908 0.22 -0.2
931,940 - B158DRAFT_0908 0.22 +0.1
931,940 - B158DRAFT_0908 0.22 -0.2
931,940 - B158DRAFT_0908 0.22 +0.8
931,940 - B158DRAFT_0908 0.22 -0.8
931,940 - B158DRAFT_0908 0.22 -1.9
931,940 - B158DRAFT_0908 0.22 -0.3
931,940 - B158DRAFT_0908 0.22 -1.8
931,940 - B158DRAFT_0908 0.22 -2.2
931,940 - B158DRAFT_0908 0.22 +3.6
931,940 - B158DRAFT_0908 0.22 -0.5
931,940 - B158DRAFT_0908 0.22 -0.6
931,940 - B158DRAFT_0908 0.22 -0.3
931,940 - B158DRAFT_0908 0.22 -2.2
931,940 - B158DRAFT_0908 0.22 -1.2
931,940 - B158DRAFT_0908 0.22 +0.2
931,940 - B158DRAFT_0908 0.22 -0.4
931,940 - B158DRAFT_0908 0.22 -1.2
931,940 - B158DRAFT_0908 0.22 +0.2
931,940 - B158DRAFT_0908 0.22 +0.1
931,940 - B158DRAFT_0908 0.22 +0.2
931,940 - B158DRAFT_0908 0.22 +0.0
931,940 - B158DRAFT_0908 0.22 -0.5
931,940 - B158DRAFT_0908 0.22 +1.8
931,940 - B158DRAFT_0908 0.22 -0.3
931,940 - B158DRAFT_0908 0.22 -0.3
931,940 - B158DRAFT_0908 0.22 +0.7
931,940 - B158DRAFT_0908 0.22 +3.0
931,940 - B158DRAFT_0908 0.22 +0.1
931,940 - B158DRAFT_0908 0.22 -0.3
931,940 - B158DRAFT_0908 0.22 -0.8
931,940 - B158DRAFT_0908 0.22 -0.5
931,968 + B158DRAFT_0908 0.25 -2.1
931,976 + B158DRAFT_0908 0.26 -0.3
931,976 - B158DRAFT_0908 0.26 -2.9
932,071 + B158DRAFT_0908 0.35 -2.4
932,116 + B158DRAFT_0908 0.39 -1.4
932,124 - B158DRAFT_0908 0.40 -1.2
932,124 - B158DRAFT_0908 0.40 +0.9
932,236 - B158DRAFT_0908 0.51 -0.4
932,310 + B158DRAFT_0908 0.58 +0.5
932,351 + B158DRAFT_0908 0.62 +1.5
932,358 + B158DRAFT_0908 0.62 -2.1
932,358 + B158DRAFT_0908 0.62 -0.5
932,358 + B158DRAFT_0908 0.62 -1.1
932,398 + B158DRAFT_0908 0.66 +1.4
932,430 + B158DRAFT_0908 0.69 -0.6
932,445 - B158DRAFT_0908 0.71 -0.3
932,517 + B158DRAFT_0908 0.78 -0.8
932,517 + B158DRAFT_0908 0.78 -1.9
932,517 + B158DRAFT_0908 0.78 -3.3
932,517 + B158DRAFT_0908 0.78 -1.2
932,525 - B158DRAFT_0908 0.78 -1.0
932,525 - B158DRAFT_0908 0.78 +1.9
932,525 - B158DRAFT_0908 0.78 -0.0
932,533 + B158DRAFT_0908 0.79 +0.4
932,621 - B158DRAFT_0908 0.88 -0.5
932,746 + +2.2
932,800 - +1.3
932,851 + +2.8
932,857 + +2.1
932,857 + +1.5
932,859 - +1.1
932,865 - +1.5
932,954 - +3.8
933,029 + +6.9
933,126 + +3.8
933,134 - +4.1
933,134 - +1.7
933,134 - +2.5
933,134 - +3.9
933,134 - +3.5
933,142 - +2.7
933,152 + +3.5
933,189 - +3.3
933,321 - B158DRAFT_0909 0.22 +3.4
933,368 + B158DRAFT_0909 0.27 +3.9
933,381 + B158DRAFT_0909 0.28 +3.4
933,389 - B158DRAFT_0909 0.29 +4.4
933,389 - B158DRAFT_0909 0.29 +3.6
933,389 - B158DRAFT_0909 0.29 +1.7
933,389 - B158DRAFT_0909 0.29 +3.2
933,460 - B158DRAFT_0909 0.37 +4.2
933,571 + B158DRAFT_0909 0.49 +2.6
933,665 + B158DRAFT_0909 0.60 +3.4
933,673 - B158DRAFT_0909 0.61 +4.2
933,737 + B158DRAFT_0909 0.68 +4.0

Or see this region's nucleotide sequence