Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0777

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0775 and B158DRAFT_0776 are separated by 32 nucleotidesB158DRAFT_0776 and B158DRAFT_0777 are separated by 180 nucleotidesB158DRAFT_0777 and B158DRAFT_0778 are separated by 109 nucleotides B158DRAFT_0775: B158DRAFT_0775 - Protein of unknown function (DUF3301)., at 781,072 to 781,443 _0775 B158DRAFT_0776: B158DRAFT_0776 - outer membrane transport energization protein ExbD (TC 2.C.1.1.1), at 781,476 to 781,889 _0776 B158DRAFT_0777: B158DRAFT_0777 - outer membrane transport energization protein ExbD (TC 2.C.1.1.1), at 782,070 to 782,486 _0777 B158DRAFT_0778: B158DRAFT_0778 - DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18), at 782,596 to 783,405 _0778 Position (kb) 782 783Strain fitness (log2 ratio) -2 -1 0 1 2 3at 781.091 kb on - strandat 781.099 kb on - strandat 781.123 kb on - strand, within B158DRAFT_0775at 781.192 kb on - strand, within B158DRAFT_0775at 781.212 kb on - strand, within B158DRAFT_0775at 781.308 kb on + strand, within B158DRAFT_0775at 781.311 kb on - strand, within B158DRAFT_0775at 781.315 kb on + strand, within B158DRAFT_0775at 781.339 kb on + strand, within B158DRAFT_0775at 781.344 kb on + strand, within B158DRAFT_0775at 781.344 kb on + strand, within B158DRAFT_0775at 781.352 kb on - strand, within B158DRAFT_0775at 781.428 kb on + strandat 781.436 kb on - strandat 782.057 kb on - strandat 782.063 kb on + strandat 782.071 kb on - strandat 782.083 kb on + strandat 782.083 kb on + strandat 782.091 kb on - strandat 782.091 kb on - strandat 782.133 kb on - strand, within B158DRAFT_0777at 782.133 kb on - strand, within B158DRAFT_0777at 782.139 kb on + strand, within B158DRAFT_0777at 782.270 kb on + strand, within B158DRAFT_0777at 782.270 kb on + strand, within B158DRAFT_0777at 782.278 kb on - strand, within B158DRAFT_0777at 782.278 kb on - strand, within B158DRAFT_0777at 782.278 kb on - strand, within B158DRAFT_0777at 782.278 kb on - strand, within B158DRAFT_0777at 782.278 kb on - strand, within B158DRAFT_0777at 782.303 kb on + strand, within B158DRAFT_0777at 782.303 kb on + strand, within B158DRAFT_0777at 782.303 kb on + strand, within B158DRAFT_0777at 782.303 kb on + strand, within B158DRAFT_0777at 782.303 kb on + strand, within B158DRAFT_0777at 782.303 kb on + strand, within B158DRAFT_0777at 782.303 kb on + strand, within B158DRAFT_0777at 782.306 kb on - strand, within B158DRAFT_0777at 782.311 kb on - strand, within B158DRAFT_0777at 782.311 kb on - strand, within B158DRAFT_0777at 782.311 kb on - strand, within B158DRAFT_0777at 782.311 kb on - strand, within B158DRAFT_0777at 782.311 kb on - strand, within B158DRAFT_0777at 782.311 kb on - strand, within B158DRAFT_0777at 782.314 kb on + strand, within B158DRAFT_0777at 782.322 kb on - strand, within B158DRAFT_0777at 782.332 kb on + strand, within B158DRAFT_0777at 782.332 kb on + strand, within B158DRAFT_0777at 782.332 kb on + strand, within B158DRAFT_0777at 782.340 kb on - strand, within B158DRAFT_0777at 782.340 kb on - strand, within B158DRAFT_0777at 782.342 kb on + strand, within B158DRAFT_0777at 782.342 kb on + strand, within B158DRAFT_0777at 782.342 kb on + strand, within B158DRAFT_0777at 782.342 kb on + strand, within B158DRAFT_0777at 782.350 kb on - strand, within B158DRAFT_0777at 782.350 kb on - strand, within B158DRAFT_0777at 782.350 kb on - strand, within B158DRAFT_0777at 782.350 kb on - strand, within B158DRAFT_0777at 782.350 kb on - strand, within B158DRAFT_0777at 782.350 kb on - strand, within B158DRAFT_0777at 782.405 kb on - strand, within B158DRAFT_0777at 782.451 kb on - strandat 782.469 kb on - strandat 782.485 kb on - strandat 782.557 kb on + strandat 782.562 kb on + strandat 782.570 kb on - strandat 782.572 kb on + strandat 782.660 kb on + strandat 782.660 kb on + strandat 782.660 kb on + strandat 782.668 kb on - strandat 782.668 kb on - strandat 782.677 kb on + strand, within B158DRAFT_0778at 782.692 kb on + strand, within B158DRAFT_0778at 782.692 kb on + strand, within B158DRAFT_0778at 782.692 kb on + strand, within B158DRAFT_0778at 782.692 kb on + strand, within B158DRAFT_0778at 782.700 kb on - strand, within B158DRAFT_0778at 782.700 kb on - strand, within B158DRAFT_0778at 782.700 kb on - strand, within B158DRAFT_0778at 782.700 kb on - strand, within B158DRAFT_0778at 782.700 kb on - strand, within B158DRAFT_0778at 782.700 kb on - strand, within B158DRAFT_0778at 782.700 kb on - strand, within B158DRAFT_0778at 782.700 kb on - strand, within B158DRAFT_0778at 782.752 kb on + strand, within B158DRAFT_0778at 782.757 kb on + strand, within B158DRAFT_0778at 782.757 kb on + strand, within B158DRAFT_0778at 782.765 kb on - strand, within B158DRAFT_0778at 782.765 kb on - strand, within B158DRAFT_0778at 782.765 kb on - strand, within B158DRAFT_0778at 782.826 kb on + strand, within B158DRAFT_0778at 782.826 kb on + strand, within B158DRAFT_0778at 782.826 kb on + strand, within B158DRAFT_0778at 782.826 kb on + strand, within B158DRAFT_0778at 782.826 kb on + strand, within B158DRAFT_0778at 782.826 kb on + strand, within B158DRAFT_0778at 782.831 kb on + strand, within B158DRAFT_0778at 782.834 kb on - strand, within B158DRAFT_0778at 782.834 kb on - strand, within B158DRAFT_0778at 782.834 kb on - strand, within B158DRAFT_0778at 782.834 kb on - strand, within B158DRAFT_0778at 782.834 kb on - strand, within B158DRAFT_0778at 782.839 kb on - strand, within B158DRAFT_0778at 782.839 kb on - strand, within B158DRAFT_0778at 782.839 kb on - strand, within B158DRAFT_0778at 782.839 kb on - strand, within B158DRAFT_0778at 782.839 kb on - strand, within B158DRAFT_0778at 782.880 kb on - strand, within B158DRAFT_0778at 782.891 kb on + strand, within B158DRAFT_0778at 782.899 kb on - strand, within B158DRAFT_0778at 782.899 kb on - strand, within B158DRAFT_0778at 782.959 kb on - strand, within B158DRAFT_0778at 782.962 kb on + strand, within B158DRAFT_0778at 782.967 kb on + strand, within B158DRAFT_0778at 782.970 kb on - strand, within B158DRAFT_0778at 782.970 kb on - strand, within B158DRAFT_0778at 782.970 kb on - strand, within B158DRAFT_0778at 783.009 kb on + strand, within B158DRAFT_0778at 783.014 kb on + strand, within B158DRAFT_0778at 783.014 kb on + strand, within B158DRAFT_0778at 783.014 kb on + strand, within B158DRAFT_0778at 783.017 kb on - strand, within B158DRAFT_0778at 783.017 kb on - strand, within B158DRAFT_0778at 783.022 kb on - strand, within B158DRAFT_0778at 783.022 kb on - strand, within B158DRAFT_0778at 783.034 kb on + strand, within B158DRAFT_0778at 783.047 kb on - strand, within B158DRAFT_0778at 783.048 kb on - strand, within B158DRAFT_0778at 783.063 kb on + strand, within B158DRAFT_0778at 783.109 kb on - strand, within B158DRAFT_0778at 783.180 kb on - strand, within B158DRAFT_0778at 783.184 kb on - strand, within B158DRAFT_0778at 783.187 kb on + strand, within B158DRAFT_0778at 783.255 kb on + strand, within B158DRAFT_0778at 783.255 kb on + strand, within B158DRAFT_0778at 783.255 kb on + strand, within B158DRAFT_0778at 783.262 kb on + strand, within B158DRAFT_0778at 783.293 kb on + strand, within B158DRAFT_0778at 783.294 kb on + strand, within B158DRAFT_0778at 783.294 kb on + strand, within B158DRAFT_0778at 783.301 kb on - strand, within B158DRAFT_0778at 783.312 kb on - strand, within B158DRAFT_0778at 783.332 kb on + strandat 783.332 kb on + strandat 783.334 kb on + strandat 783.340 kb on + strandat 783.340 kb on - strandat 783.340 kb on - strandat 783.340 kb on - strandat 783.355 kb on + strandat 783.427 kb on + strandat 783.427 kb on + strandat 783.435 kb on - strandat 783.435 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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781,091 - +0.4
781,099 - +0.7
781,123 - B158DRAFT_0775 0.14 -0.3
781,192 - B158DRAFT_0775 0.32 +2.8
781,212 - B158DRAFT_0775 0.38 -0.0
781,308 + B158DRAFT_0775 0.63 -0.1
781,311 - B158DRAFT_0775 0.64 +0.2
781,315 + B158DRAFT_0775 0.65 -0.4
781,339 + B158DRAFT_0775 0.72 -0.2
781,344 + B158DRAFT_0775 0.73 -0.5
781,344 + B158DRAFT_0775 0.73 +0.7
781,352 - B158DRAFT_0775 0.75 -0.1
781,428 + -0.1
781,436 - -1.7
782,057 - -1.2
782,063 + -1.0
782,071 - +0.2
782,083 + -1.1
782,083 + -0.2
782,091 - -0.8
782,091 - -2.2
782,133 - B158DRAFT_0777 0.15 -0.5
782,133 - B158DRAFT_0777 0.15 -1.2
782,139 + B158DRAFT_0777 0.17 +0.2
782,270 + B158DRAFT_0777 0.48 -1.0
782,270 + B158DRAFT_0777 0.48 -2.1
782,278 - B158DRAFT_0777 0.50 -0.9
782,278 - B158DRAFT_0777 0.50 +0.5
782,278 - B158DRAFT_0777 0.50 -0.2
782,278 - B158DRAFT_0777 0.50 +0.5
782,278 - B158DRAFT_0777 0.50 +0.2
782,303 + B158DRAFT_0777 0.56 -0.1
782,303 + B158DRAFT_0777 0.56 -0.6
782,303 + B158DRAFT_0777 0.56 +0.3
782,303 + B158DRAFT_0777 0.56 -1.3
782,303 + B158DRAFT_0777 0.56 -0.1
782,303 + B158DRAFT_0777 0.56 +0.5
782,303 + B158DRAFT_0777 0.56 -0.3
782,306 - B158DRAFT_0777 0.57 +1.1
782,311 - B158DRAFT_0777 0.58 -0.6
782,311 - B158DRAFT_0777 0.58 +0.6
782,311 - B158DRAFT_0777 0.58 -0.4
782,311 - B158DRAFT_0777 0.58 -1.0
782,311 - B158DRAFT_0777 0.58 -0.2
782,311 - B158DRAFT_0777 0.58 -2.0
782,314 + B158DRAFT_0777 0.59 -1.0
782,322 - B158DRAFT_0777 0.60 -1.4
782,332 + B158DRAFT_0777 0.63 +0.9
782,332 + B158DRAFT_0777 0.63 -0.1
782,332 + B158DRAFT_0777 0.63 +0.5
782,340 - B158DRAFT_0777 0.65 +2.9
782,340 - B158DRAFT_0777 0.65 -1.1
782,342 + B158DRAFT_0777 0.65 -0.5
782,342 + B158DRAFT_0777 0.65 +0.4
782,342 + B158DRAFT_0777 0.65 -1.2
782,342 + B158DRAFT_0777 0.65 -0.2
782,350 - B158DRAFT_0777 0.67 -2.1
782,350 - B158DRAFT_0777 0.67 +1.4
782,350 - B158DRAFT_0777 0.67 -0.4
782,350 - B158DRAFT_0777 0.67 +1.1
782,350 - B158DRAFT_0777 0.67 +1.8
782,350 - B158DRAFT_0777 0.67 +1.6
782,405 - B158DRAFT_0777 0.80 -1.6
782,451 - +1.4
782,469 - -1.4
782,485 - +0.5
782,557 + -0.2
782,562 + -2.0
782,570 - +0.6
782,572 + -2.3
782,660 + -1.2
782,660 + +2.1
782,660 + -0.1
782,668 - +0.6
782,668 - -0.0
782,677 + B158DRAFT_0778 0.10 +0.5
782,692 + B158DRAFT_0778 0.12 +0.3
782,692 + B158DRAFT_0778 0.12 -1.3
782,692 + B158DRAFT_0778 0.12 +0.3
782,692 + B158DRAFT_0778 0.12 -0.7
782,700 - B158DRAFT_0778 0.13 +0.1
782,700 - B158DRAFT_0778 0.13 +0.2
782,700 - B158DRAFT_0778 0.13 -0.5
782,700 - B158DRAFT_0778 0.13 +1.4
782,700 - B158DRAFT_0778 0.13 -0.6
782,700 - B158DRAFT_0778 0.13 -0.1
782,700 - B158DRAFT_0778 0.13 -1.5
782,700 - B158DRAFT_0778 0.13 +0.2
782,752 + B158DRAFT_0778 0.19 -1.5
782,757 + B158DRAFT_0778 0.20 -0.8
782,757 + B158DRAFT_0778 0.20 +1.8
782,765 - B158DRAFT_0778 0.21 -0.5
782,765 - B158DRAFT_0778 0.21 -0.1
782,765 - B158DRAFT_0778 0.21 -0.9
782,826 + B158DRAFT_0778 0.28 +1.9
782,826 + B158DRAFT_0778 0.28 -0.3
782,826 + B158DRAFT_0778 0.28 +0.7
782,826 + B158DRAFT_0778 0.28 +1.0
782,826 + B158DRAFT_0778 0.28 +3.0
782,826 + B158DRAFT_0778 0.28 -1.1
782,831 + B158DRAFT_0778 0.29 -1.5
782,834 - B158DRAFT_0778 0.29 -0.9
782,834 - B158DRAFT_0778 0.29 -0.1
782,834 - B158DRAFT_0778 0.29 -0.6
782,834 - B158DRAFT_0778 0.29 +0.7
782,834 - B158DRAFT_0778 0.29 -0.8
782,839 - B158DRAFT_0778 0.30 +1.2
782,839 - B158DRAFT_0778 0.30 -0.5
782,839 - B158DRAFT_0778 0.30 -2.4
782,839 - B158DRAFT_0778 0.30 -0.8
782,839 - B158DRAFT_0778 0.30 -0.0
782,880 - B158DRAFT_0778 0.35 -1.0
782,891 + B158DRAFT_0778 0.36 -0.9
782,899 - B158DRAFT_0778 0.37 -0.6
782,899 - B158DRAFT_0778 0.37 -0.1
782,959 - B158DRAFT_0778 0.45 -0.0
782,962 + B158DRAFT_0778 0.45 -0.8
782,967 + B158DRAFT_0778 0.46 +0.4
782,970 - B158DRAFT_0778 0.46 -2.0
782,970 - B158DRAFT_0778 0.46 -1.2
782,970 - B158DRAFT_0778 0.46 +0.0
783,009 + B158DRAFT_0778 0.51 -0.5
783,014 + B158DRAFT_0778 0.52 +0.2
783,014 + B158DRAFT_0778 0.52 -1.4
783,014 + B158DRAFT_0778 0.52 -1.6
783,017 - B158DRAFT_0778 0.52 +2.0
783,017 - B158DRAFT_0778 0.52 +0.8
783,022 - B158DRAFT_0778 0.53 -0.7
783,022 - B158DRAFT_0778 0.53 -0.4
783,034 + B158DRAFT_0778 0.54 +1.1
783,047 - B158DRAFT_0778 0.56 -0.5
783,048 - B158DRAFT_0778 0.56 +0.7
783,063 + B158DRAFT_0778 0.58 +2.3
783,109 - B158DRAFT_0778 0.63 -0.4
783,180 - B158DRAFT_0778 0.72 +0.0
783,184 - B158DRAFT_0778 0.73 -0.6
783,187 + B158DRAFT_0778 0.73 +2.2
783,255 + B158DRAFT_0778 0.81 +3.6
783,255 + B158DRAFT_0778 0.81 +1.2
783,255 + B158DRAFT_0778 0.81 -0.3
783,262 + B158DRAFT_0778 0.82 -0.6
783,293 + B158DRAFT_0778 0.86 -1.3
783,294 + B158DRAFT_0778 0.86 -1.6
783,294 + B158DRAFT_0778 0.86 +0.6
783,301 - B158DRAFT_0778 0.87 -1.0
783,312 - B158DRAFT_0778 0.88 -2.0
783,332 + +0.5
783,332 + +0.3
783,334 + +0.9
783,340 + -0.7
783,340 - +0.2
783,340 - +1.0
783,340 - +0.2
783,355 + -0.4
783,427 + -0.2
783,427 + -0.1
783,435 - -0.7
783,435 - -1.3

Or see this region's nucleotide sequence