Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0704

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0703 and B158DRAFT_0704 are separated by 197 nucleotidesB158DRAFT_0704 and B158DRAFT_0705 are separated by 28 nucleotides B158DRAFT_0703: B158DRAFT_0703 - hypothetical protein, at 702,677 to 704,278 _0703 B158DRAFT_0704: B158DRAFT_0704 - C-terminal peptidase (prc), at 704,476 to 705,723 _0704 B158DRAFT_0705: B158DRAFT_0705 - Membrane-bound metallopeptidase, at 705,752 to 706,927 _0705 Position (kb) 704 705 706Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 703.590 kb on - strand, within B158DRAFT_0703at 703.631 kb on + strand, within B158DRAFT_0703at 703.658 kb on - strand, within B158DRAFT_0703at 703.702 kb on + strand, within B158DRAFT_0703at 703.797 kb on - strand, within B158DRAFT_0703at 703.811 kb on + strand, within B158DRAFT_0703at 703.821 kb on + strand, within B158DRAFT_0703at 703.821 kb on + strand, within B158DRAFT_0703at 703.821 kb on + strand, within B158DRAFT_0703at 703.829 kb on - strand, within B158DRAFT_0703at 703.919 kb on + strand, within B158DRAFT_0703at 703.922 kb on - strand, within B158DRAFT_0703at 704.003 kb on - strand, within B158DRAFT_0703at 704.005 kb on + strand, within B158DRAFT_0703at 704.040 kb on + strand, within B158DRAFT_0703at 704.042 kb on - strand, within B158DRAFT_0703at 704.048 kb on - strand, within B158DRAFT_0703at 704.048 kb on - strand, within B158DRAFT_0703at 704.110 kb on + strand, within B158DRAFT_0703at 704.134 kb on + strandat 704.151 kb on - strandat 704.181 kb on + strandat 704.181 kb on + strandat 704.181 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.182 kb on + strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.190 kb on - strandat 704.195 kb on - strandat 704.197 kb on + strandat 704.197 kb on + strandat 704.200 kb on - strandat 704.205 kb on - strandat 704.272 kb on + strandat 704.293 kb on - strandat 704.346 kb on - strandat 704.394 kb on - strandat 704.522 kb on + strandat 704.598 kb on + strandat 704.598 kb on + strandat 704.598 kb on + strandat 704.606 kb on - strand, within B158DRAFT_0704at 704.606 kb on - strand, within B158DRAFT_0704at 704.626 kb on + strand, within B158DRAFT_0704at 704.671 kb on + strand, within B158DRAFT_0704at 704.687 kb on - strand, within B158DRAFT_0704at 704.733 kb on - strand, within B158DRAFT_0704at 704.734 kb on - strand, within B158DRAFT_0704at 704.744 kb on + strand, within B158DRAFT_0704at 704.749 kb on + strand, within B158DRAFT_0704at 704.749 kb on + strand, within B158DRAFT_0704at 704.757 kb on - strand, within B158DRAFT_0704at 704.890 kb on - strand, within B158DRAFT_0704at 704.905 kb on - strand, within B158DRAFT_0704at 705.069 kb on - strand, within B158DRAFT_0704at 705.200 kb on + strand, within B158DRAFT_0704at 705.200 kb on + strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704at 705.455 kb on + strand, within B158DRAFT_0704at 705.482 kb on + strand, within B158DRAFT_0704at 705.484 kb on - strand, within B158DRAFT_0704at 705.484 kb on - strand, within B158DRAFT_0704at 705.490 kb on - strand, within B158DRAFT_0704at 705.490 kb on - strand, within B158DRAFT_0704at 705.490 kb on - strand, within B158DRAFT_0704at 705.492 kb on + strand, within B158DRAFT_0704at 705.639 kb on + strandat 705.654 kb on - strandat 705.682 kb on - strandat 705.703 kb on + strandat 705.711 kb on - strandat 705.717 kb on + strandat 705.817 kb on + strandat 705.842 kb on - strandat 705.865 kb on + strandat 705.921 kb on + strand, within B158DRAFT_0705at 705.934 kb on - strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.958 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.999 kb on + strand, within B158DRAFT_0705at 706.100 kb on + strand, within B158DRAFT_0705at 706.144 kb on - strand, within B158DRAFT_0705at 706.171 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.326 kb on - strand, within B158DRAFT_0705at 706.358 kb on + strand, within B158DRAFT_0705at 706.402 kb on + strand, within B158DRAFT_0705at 706.410 kb on - strand, within B158DRAFT_0705at 706.410 kb on - strand, within B158DRAFT_0705at 706.621 kb on - strand, within B158DRAFT_0705at 706.622 kb on - strand, within B158DRAFT_0705at 706.672 kb on + strand, within B158DRAFT_0705at 706.672 kb on + strand, within B158DRAFT_0705at 706.680 kb on - strand, within B158DRAFT_0705at 706.680 kb on - strand, within B158DRAFT_0705

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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703,590 - B158DRAFT_0703 0.57 -0.6
703,631 + B158DRAFT_0703 0.60 +3.8
703,658 - B158DRAFT_0703 0.61 +1.1
703,702 + B158DRAFT_0703 0.64 +0.8
703,797 - B158DRAFT_0703 0.70 -0.9
703,811 + B158DRAFT_0703 0.71 -0.4
703,821 + B158DRAFT_0703 0.71 -0.6
703,821 + B158DRAFT_0703 0.71 +0.4
703,821 + B158DRAFT_0703 0.71 +1.1
703,829 - B158DRAFT_0703 0.72 +0.0
703,919 + B158DRAFT_0703 0.78 -0.8
703,922 - B158DRAFT_0703 0.78 -0.0
704,003 - B158DRAFT_0703 0.83 +0.2
704,005 + B158DRAFT_0703 0.83 -2.1
704,040 + B158DRAFT_0703 0.85 -0.1
704,042 - B158DRAFT_0703 0.85 -0.7
704,048 - B158DRAFT_0703 0.86 -2.0
704,048 - B158DRAFT_0703 0.86 +0.6
704,110 + B158DRAFT_0703 0.89 +1.9
704,134 + -1.9
704,151 - -0.3
704,181 + -0.2
704,181 + +1.5
704,181 + -0.9
704,182 + -0.6
704,182 + -1.3
704,182 + +0.2
704,182 + -0.3
704,182 + +0.4
704,182 + +0.2
704,182 + -1.3
704,182 + -1.2
704,182 + +0.2
704,190 - -0.3
704,190 - -0.3
704,190 - +2.3
704,190 - +0.0
704,190 - -0.4
704,190 - -1.4
704,190 - -0.1
704,190 - +0.0
704,190 - +0.5
704,190 - +0.1
704,195 - -0.6
704,197 + -2.8
704,197 + -1.7
704,200 - -0.8
704,205 - -0.8
704,272 + +2.4
704,293 - +0.0
704,346 - +1.2
704,394 - +1.2
704,522 + +1.3
704,598 + +0.9
704,598 + +3.3
704,598 + -0.7
704,606 - B158DRAFT_0704 0.10 +1.0
704,606 - B158DRAFT_0704 0.10 +1.7
704,626 + B158DRAFT_0704 0.12 +0.9
704,671 + B158DRAFT_0704 0.16 +1.7
704,687 - B158DRAFT_0704 0.17 +1.7
704,733 - B158DRAFT_0704 0.21 +3.3
704,734 - B158DRAFT_0704 0.21 +2.3
704,744 + B158DRAFT_0704 0.21 +1.5
704,749 + B158DRAFT_0704 0.22 +0.9
704,749 + B158DRAFT_0704 0.22 +3.3
704,757 - B158DRAFT_0704 0.23 +2.3
704,890 - B158DRAFT_0704 0.33 +1.7
704,905 - B158DRAFT_0704 0.34 +3.3
705,069 - B158DRAFT_0704 0.48 +1.0
705,200 + B158DRAFT_0704 0.58 +0.1
705,200 + B158DRAFT_0704 0.58 +1.5
705,208 - B158DRAFT_0704 0.59 +1.3
705,208 - B158DRAFT_0704 0.59 +4.3
705,208 - B158DRAFT_0704 0.59 +1.5
705,208 - B158DRAFT_0704 0.59 +1.5
705,455 + B158DRAFT_0704 0.78 -0.4
705,482 + B158DRAFT_0704 0.81 +0.5
705,484 - B158DRAFT_0704 0.81 +0.9
705,484 - B158DRAFT_0704 0.81 -0.3
705,490 - B158DRAFT_0704 0.81 +3.3
705,490 - B158DRAFT_0704 0.81 +3.3
705,490 - B158DRAFT_0704 0.81 +1.5
705,492 + B158DRAFT_0704 0.81 +2.3
705,639 + +2.7
705,654 - +0.1
705,682 - +1.7
705,703 + +1.1
705,711 - +1.7
705,717 + -1.7
705,817 + +1.7
705,842 - +2.1
705,865 + +1.5
705,921 + B158DRAFT_0705 0.14 +1.0
705,934 - B158DRAFT_0705 0.15 +2.7
705,955 + B158DRAFT_0705 0.17 +2.3
705,955 + B158DRAFT_0705 0.17 +0.1
705,955 + B158DRAFT_0705 0.17 -0.7
705,955 + B158DRAFT_0705 0.17 +3.3
705,955 + B158DRAFT_0705 0.17 +3.3
705,958 - B158DRAFT_0705 0.18 +2.2
705,963 - B158DRAFT_0705 0.18 +1.4
705,963 - B158DRAFT_0705 0.18 +1.0
705,963 - B158DRAFT_0705 0.18 +3.5
705,963 - B158DRAFT_0705 0.18 +1.6
705,963 - B158DRAFT_0705 0.18 +2.0
705,963 - B158DRAFT_0705 0.18 +1.7
705,999 + B158DRAFT_0705 0.21 +1.7
706,100 + B158DRAFT_0705 0.30 +3.0
706,144 - B158DRAFT_0705 0.33 +3.7
706,171 + B158DRAFT_0705 0.36 +3.1
706,294 + B158DRAFT_0705 0.46 +2.9
706,294 + B158DRAFT_0705 0.46 +2.8
706,294 + B158DRAFT_0705 0.46 -0.9
706,294 + B158DRAFT_0705 0.46 +0.5
706,326 - B158DRAFT_0705 0.49 +2.3
706,358 + B158DRAFT_0705 0.52 +1.8
706,402 + B158DRAFT_0705 0.55 +2.0
706,410 - B158DRAFT_0705 0.56 +0.9
706,410 - B158DRAFT_0705 0.56 +0.2
706,621 - B158DRAFT_0705 0.74 +2.5
706,622 - B158DRAFT_0705 0.74 +1.4
706,672 + B158DRAFT_0705 0.78 +1.8
706,672 + B158DRAFT_0705 0.78 +2.7
706,680 - B158DRAFT_0705 0.79 +2.0
706,680 - B158DRAFT_0705 0.79 +2.7

Or see this region's nucleotide sequence