Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0677

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0676 and B158DRAFT_0677 are separated by 124 nucleotidesB158DRAFT_0677 and B158DRAFT_0678 are separated by 29 nucleotidesB158DRAFT_0678 and B158DRAFT_0679 are separated by 67 nucleotides B158DRAFT_0676: B158DRAFT_0676 - Lauroyl/myristoyl acyltransferase, at 678,299 to 679,789 _0676 B158DRAFT_0677: B158DRAFT_0677 - Uncharacterized small membrane protein, at 679,914 to 680,294 _0677 B158DRAFT_0678: B158DRAFT_0678 - TIGR02444 family protein, at 680,324 to 680,830 _0678 B158DRAFT_0679: B158DRAFT_0679 - FKBP-type peptidyl-prolyl cis-trans isomerases 1, at 680,898 to 681,845 _0679 Position (kb) 679 680 681Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 678.944 kb on - strand, within B158DRAFT_0676at 678.957 kb on + strand, within B158DRAFT_0676at 678.965 kb on - strand, within B158DRAFT_0676at 678.965 kb on - strand, within B158DRAFT_0676at 678.965 kb on - strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.967 kb on + strand, within B158DRAFT_0676at 678.975 kb on - strand, within B158DRAFT_0676at 678.975 kb on - strand, within B158DRAFT_0676at 679.031 kb on - strand, within B158DRAFT_0676at 679.052 kb on + strand, within B158DRAFT_0676at 679.060 kb on - strand, within B158DRAFT_0676at 679.078 kb on - strand, within B158DRAFT_0676at 679.108 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.116 kb on + strand, within B158DRAFT_0676at 679.124 kb on - strand, within B158DRAFT_0676at 679.138 kb on + strand, within B158DRAFT_0676at 679.156 kb on - strand, within B158DRAFT_0676at 679.226 kb on - strand, within B158DRAFT_0676at 679.291 kb on + strand, within B158DRAFT_0676at 679.315 kb on + strand, within B158DRAFT_0676at 679.320 kb on + strand, within B158DRAFT_0676at 679.320 kb on + strand, within B158DRAFT_0676at 679.366 kb on + strand, within B158DRAFT_0676at 679.366 kb on + strand, within B158DRAFT_0676at 679.366 kb on + strand, within B158DRAFT_0676at 679.407 kb on - strand, within B158DRAFT_0676at 679.407 kb on - strand, within B158DRAFT_0676at 679.412 kb on - strand, within B158DRAFT_0676at 679.468 kb on + strand, within B158DRAFT_0676at 679.512 kb on + strand, within B158DRAFT_0676at 679.512 kb on + strand, within B158DRAFT_0676at 679.521 kb on - strand, within B158DRAFT_0676at 679.523 kb on + strand, within B158DRAFT_0676at 679.523 kb on + strand, within B158DRAFT_0676at 679.523 kb on + strand, within B158DRAFT_0676at 679.523 kb on + strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.531 kb on - strand, within B158DRAFT_0676at 679.545 kb on + strand, within B158DRAFT_0676at 679.581 kb on + strand, within B158DRAFT_0676at 679.588 kb on + strand, within B158DRAFT_0676at 679.588 kb on + strand, within B158DRAFT_0676at 679.593 kb on + strand, within B158DRAFT_0676at 679.593 kb on + strand, within B158DRAFT_0676at 679.593 kb on + strand, within B158DRAFT_0676at 679.596 kb on - strand, within B158DRAFT_0676at 679.601 kb on - strand, within B158DRAFT_0676at 679.636 kb on + strand, within B158DRAFT_0676at 679.657 kb on - strandat 679.673 kb on + strandat 679.699 kb on - strandat 679.709 kb on + strandat 679.714 kb on + strandat 679.883 kb on + strandat 679.884 kb on - strandat 679.891 kb on - strandat 679.893 kb on + strandat 679.946 kb on + strandat 679.960 kb on + strand, within B158DRAFT_0677at 679.965 kb on + strand, within B158DRAFT_0677at 679.990 kb on + strand, within B158DRAFT_0677at 679.990 kb on + strand, within B158DRAFT_0677at 679.990 kb on + strand, within B158DRAFT_0677at 679.990 kb on + strand, within B158DRAFT_0677at 679.998 kb on - strand, within B158DRAFT_0677at 680.011 kb on + strand, within B158DRAFT_0677at 680.110 kb on - strand, within B158DRAFT_0677at 680.110 kb on - strand, within B158DRAFT_0677at 680.110 kb on - strand, within B158DRAFT_0677at 680.163 kb on - strand, within B158DRAFT_0677at 680.255 kb on - strand, within B158DRAFT_0677at 680.255 kb on - strand, within B158DRAFT_0677at 680.262 kb on + strandat 680.262 kb on + strandat 680.262 kb on + strandat 680.270 kb on - strandat 680.270 kb on - strandat 680.283 kb on - strandat 680.283 kb on - strandat 680.323 kb on - strandat 680.377 kb on - strand, within B158DRAFT_0678at 680.409 kb on - strand, within B158DRAFT_0678at 680.409 kb on - strand, within B158DRAFT_0678at 680.423 kb on + strand, within B158DRAFT_0678at 680.423 kb on + strand, within B158DRAFT_0678at 680.441 kb on - strand, within B158DRAFT_0678at 680.480 kb on - strand, within B158DRAFT_0678at 680.480 kb on - strand, within B158DRAFT_0678at 680.480 kb on - strand, within B158DRAFT_0678at 680.488 kb on - strand, within B158DRAFT_0678at 680.488 kb on - strand, within B158DRAFT_0678at 680.531 kb on + strand, within B158DRAFT_0678at 680.539 kb on - strand, within B158DRAFT_0678at 680.539 kb on - strand, within B158DRAFT_0678at 680.566 kb on - strand, within B158DRAFT_0678at 680.666 kb on + strand, within B158DRAFT_0678at 680.666 kb on + strand, within B158DRAFT_0678at 680.666 kb on + strand, within B158DRAFT_0678at 680.674 kb on - strand, within B158DRAFT_0678at 680.674 kb on - strand, within B158DRAFT_0678at 680.674 kb on - strand, within B158DRAFT_0678at 680.674 kb on - strand, within B158DRAFT_0678at 680.770 kb on + strand, within B158DRAFT_0678at 680.771 kb on + strand, within B158DRAFT_0678at 680.777 kb on + strand, within B158DRAFT_0678at 680.800 kb on + strandat 680.803 kb on - strandat 680.818 kb on - strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.824 kb on + strandat 680.832 kb on - strandat 680.832 kb on - strandat 680.832 kb on - strandat 680.832 kb on - strandat 680.832 kb on - strandat 680.851 kb on + strandat 680.921 kb on - strandat 680.944 kb on + strandat 680.944 kb on + strandat 680.947 kb on - strandat 680.952 kb on - strandat 680.959 kb on + strandat 680.998 kb on + strand, within B158DRAFT_0679at 680.998 kb on + strand, within B158DRAFT_0679at 681.006 kb on - strand, within B158DRAFT_0679at 681.032 kb on - strand, within B158DRAFT_0679at 681.094 kb on + strand, within B158DRAFT_0679at 681.094 kb on + strand, within B158DRAFT_0679at 681.134 kb on + strand, within B158DRAFT_0679at 681.200 kb on + strand, within B158DRAFT_0679at 681.210 kb on + strand, within B158DRAFT_0679at 681.251 kb on - strand, within B158DRAFT_0679

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
remove
678,944 - B158DRAFT_0676 0.43 +2.5
678,957 + B158DRAFT_0676 0.44 +0.1
678,965 - B158DRAFT_0676 0.45 +1.5
678,965 - B158DRAFT_0676 0.45 +1.8
678,965 - B158DRAFT_0676 0.45 +0.6
678,967 + B158DRAFT_0676 0.45 -0.1
678,967 + B158DRAFT_0676 0.45 -0.2
678,967 + B158DRAFT_0676 0.45 -0.0
678,967 + B158DRAFT_0676 0.45 +0.9
678,975 - B158DRAFT_0676 0.45 +0.7
678,975 - B158DRAFT_0676 0.45 +0.9
679,031 - B158DRAFT_0676 0.49 +1.7
679,052 + B158DRAFT_0676 0.51 +2.0
679,060 - B158DRAFT_0676 0.51 +1.0
679,078 - B158DRAFT_0676 0.52 +0.5
679,108 + B158DRAFT_0676 0.54 +2.0
679,116 + B158DRAFT_0676 0.55 +0.2
679,116 + B158DRAFT_0676 0.55 +2.3
679,116 + B158DRAFT_0676 0.55 -0.1
679,116 + B158DRAFT_0676 0.55 +4.3
679,124 - B158DRAFT_0676 0.55 -0.8
679,138 + B158DRAFT_0676 0.56 +2.7
679,156 - B158DRAFT_0676 0.57 -1.2
679,226 - B158DRAFT_0676 0.62 +2.7
679,291 + B158DRAFT_0676 0.67 +0.5
679,315 + B158DRAFT_0676 0.68 +2.0
679,320 + B158DRAFT_0676 0.68 +1.2
679,320 + B158DRAFT_0676 0.68 +2.5
679,366 + B158DRAFT_0676 0.72 +1.9
679,366 + B158DRAFT_0676 0.72 +2.7
679,366 + B158DRAFT_0676 0.72 +0.3
679,407 - B158DRAFT_0676 0.74 +0.6
679,407 - B158DRAFT_0676 0.74 +1.0
679,412 - B158DRAFT_0676 0.75 +0.5
679,468 + B158DRAFT_0676 0.78 +0.6
679,512 + B158DRAFT_0676 0.81 -0.3
679,512 + B158DRAFT_0676 0.81 +4.3
679,521 - B158DRAFT_0676 0.82 +0.0
679,523 + B158DRAFT_0676 0.82 +0.8
679,523 + B158DRAFT_0676 0.82 +1.7
679,523 + B158DRAFT_0676 0.82 +4.3
679,523 + B158DRAFT_0676 0.82 -0.2
679,531 - B158DRAFT_0676 0.83 +1.5
679,531 - B158DRAFT_0676 0.83 +0.2
679,531 - B158DRAFT_0676 0.83 -0.3
679,531 - B158DRAFT_0676 0.83 +0.7
679,531 - B158DRAFT_0676 0.83 +1.0
679,531 - B158DRAFT_0676 0.83 +1.5
679,531 - B158DRAFT_0676 0.83 -0.1
679,531 - B158DRAFT_0676 0.83 +0.7
679,545 + B158DRAFT_0676 0.84 +1.7
679,581 + B158DRAFT_0676 0.86 +0.3
679,588 + B158DRAFT_0676 0.86 +0.5
679,588 + B158DRAFT_0676 0.86 +0.6
679,593 + B158DRAFT_0676 0.87 -0.7
679,593 + B158DRAFT_0676 0.87 +2.3
679,593 + B158DRAFT_0676 0.87 +1.6
679,596 - B158DRAFT_0676 0.87 +4.3
679,601 - B158DRAFT_0676 0.87 +1.0
679,636 + B158DRAFT_0676 0.90 +0.1
679,657 - +0.6
679,673 + +2.0
679,699 - +2.3
679,709 + -0.8
679,714 + +2.7
679,883 + -0.4
679,884 - -1.5
679,891 - -0.4
679,893 + +2.7
679,946 + -0.4
679,960 + B158DRAFT_0677 0.12 +0.1
679,965 + B158DRAFT_0677 0.13 +0.3
679,990 + B158DRAFT_0677 0.20 -0.7
679,990 + B158DRAFT_0677 0.20 -0.4
679,990 + B158DRAFT_0677 0.20 -0.6
679,990 + B158DRAFT_0677 0.20 -1.3
679,998 - B158DRAFT_0677 0.22 +0.2
680,011 + B158DRAFT_0677 0.25 +0.1
680,110 - B158DRAFT_0677 0.51 -1.3
680,110 - B158DRAFT_0677 0.51 -1.1
680,110 - B158DRAFT_0677 0.51 +0.6
680,163 - B158DRAFT_0677 0.65 +0.2
680,255 - B158DRAFT_0677 0.90 +1.6
680,255 - B158DRAFT_0677 0.90 +1.0
680,262 + -0.1
680,262 + -1.6
680,262 + +1.3
680,270 - +2.9
680,270 - +2.1
680,283 - +2.1
680,283 - +2.1
680,323 - +2.1
680,377 - B158DRAFT_0678 0.10 +1.8
680,409 - B158DRAFT_0678 0.17 +2.3
680,409 - B158DRAFT_0678 0.17 +2.2
680,423 + B158DRAFT_0678 0.20 +2.2
680,423 + B158DRAFT_0678 0.20 +2.7
680,441 - B158DRAFT_0678 0.23 +3.1
680,480 - B158DRAFT_0678 0.31 +2.4
680,480 - B158DRAFT_0678 0.31 +2.3
680,480 - B158DRAFT_0678 0.31 +3.2
680,488 - B158DRAFT_0678 0.32 +2.0
680,488 - B158DRAFT_0678 0.32 +2.9
680,531 + B158DRAFT_0678 0.41 +2.0
680,539 - B158DRAFT_0678 0.42 +1.9
680,539 - B158DRAFT_0678 0.42 +2.5
680,566 - B158DRAFT_0678 0.48 +1.6
680,666 + B158DRAFT_0678 0.67 +1.6
680,666 + B158DRAFT_0678 0.67 +3.0
680,666 + B158DRAFT_0678 0.67 +2.5
680,674 - B158DRAFT_0678 0.69 +2.3
680,674 - B158DRAFT_0678 0.69 +6.7
680,674 - B158DRAFT_0678 0.69 +2.5
680,674 - B158DRAFT_0678 0.69 +1.6
680,770 + B158DRAFT_0678 0.88 +0.8
680,771 + B158DRAFT_0678 0.88 +0.8
680,777 + B158DRAFT_0678 0.89 +0.5
680,800 + -0.7
680,803 - +0.6
680,818 - -0.8
680,824 + -0.5
680,824 + +1.1
680,824 + -2.0
680,824 + -0.9
680,824 + +2.6
680,824 + +1.1
680,824 + -1.2
680,824 + -1.8
680,824 + +0.3
680,824 + -1.0
680,832 - -0.1
680,832 - -1.3
680,832 - -1.3
680,832 - -1.7
680,832 - +0.4
680,851 + +0.2
680,921 - +0.2
680,944 + -0.5
680,944 + +0.1
680,947 - -1.6
680,952 - -1.4
680,959 + -0.8
680,998 + B158DRAFT_0679 0.11 -1.4
680,998 + B158DRAFT_0679 0.11 -1.5
681,006 - B158DRAFT_0679 0.11 -0.8
681,032 - B158DRAFT_0679 0.14 +0.7
681,094 + B158DRAFT_0679 0.21 -0.9
681,094 + B158DRAFT_0679 0.21 -0.9
681,134 + B158DRAFT_0679 0.25 +2.7
681,200 + B158DRAFT_0679 0.32 -2.4
681,210 + B158DRAFT_0679 0.33 -0.6
681,251 - B158DRAFT_0679 0.37 +1.2

Or see this region's nucleotide sequence