Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0658

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0656 and B158DRAFT_0657 are separated by 70 nucleotidesB158DRAFT_0657 and B158DRAFT_0658 are separated by 5 nucleotidesB158DRAFT_0658 and B158DRAFT_0659 are separated by 13 nucleotides B158DRAFT_0656: B158DRAFT_0656 - Arginine/lysine/ornithine decarboxylases, at 660,592 to 662,493 _0656 B158DRAFT_0657: B158DRAFT_0657 - hypothetical protein, at 662,564 to 663,259 _0657 B158DRAFT_0658: B158DRAFT_0658 - hypothetical protein, at 663,265 to 664,119 _0658 B158DRAFT_0659: B158DRAFT_0659 - hypothetical protein, at 664,133 to 664,912 _0659 Position (kb) 663 664 665Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 662.312 kb on + strandat 662.349 kb on - strandat 662.349 kb on - strandat 662.349 kb on - strandat 662.424 kb on + strandat 662.432 kb on - strandat 662.445 kb on + strandat 662.445 kb on + strandat 662.453 kb on - strandat 662.485 kb on + strandat 662.508 kb on + strandat 662.532 kb on + strandat 662.699 kb on - strand, within B158DRAFT_0657at 662.699 kb on - strand, within B158DRAFT_0657at 662.730 kb on - strand, within B158DRAFT_0657at 662.759 kb on - strand, within B158DRAFT_0657at 662.785 kb on - strand, within B158DRAFT_0657at 662.785 kb on - strand, within B158DRAFT_0657at 662.826 kb on + strand, within B158DRAFT_0657at 662.826 kb on + strand, within B158DRAFT_0657at 662.850 kb on + strand, within B158DRAFT_0657at 662.858 kb on - strand, within B158DRAFT_0657at 662.858 kb on - strand, within B158DRAFT_0657at 662.884 kb on + strand, within B158DRAFT_0657at 662.889 kb on + strand, within B158DRAFT_0657at 662.889 kb on + strand, within B158DRAFT_0657at 662.894 kb on + strand, within B158DRAFT_0657at 662.894 kb on + strand, within B158DRAFT_0657at 662.894 kb on + strand, within B158DRAFT_0657at 662.897 kb on - strand, within B158DRAFT_0657at 662.902 kb on - strand, within B158DRAFT_0657at 662.902 kb on - strand, within B158DRAFT_0657at 662.902 kb on - strand, within B158DRAFT_0657at 662.986 kb on - strand, within B158DRAFT_0657at 662.986 kb on - strand, within B158DRAFT_0657at 663.094 kb on + strand, within B158DRAFT_0657at 663.094 kb on + strand, within B158DRAFT_0657at 663.094 kb on + strand, within B158DRAFT_0657at 663.094 kb on + strand, within B158DRAFT_0657at 663.102 kb on - strand, within B158DRAFT_0657at 663.125 kb on - strand, within B158DRAFT_0657at 663.133 kb on - strand, within B158DRAFT_0657at 663.133 kb on - strand, within B158DRAFT_0657at 663.133 kb on - strand, within B158DRAFT_0657at 663.199 kb on + strandat 663.202 kb on - strandat 663.202 kb on - strandat 663.207 kb on - strandat 663.251 kb on - strandat 663.256 kb on + strandat 663.261 kb on + strandat 663.264 kb on - strandat 663.264 kb on - strandat 663.269 kb on - strandat 663.276 kb on + strandat 663.364 kb on + strand, within B158DRAFT_0658at 663.438 kb on + strand, within B158DRAFT_0658at 663.518 kb on + strand, within B158DRAFT_0658at 663.536 kb on + strand, within B158DRAFT_0658at 663.536 kb on + strand, within B158DRAFT_0658at 663.544 kb on - strand, within B158DRAFT_0658at 663.655 kb on + strand, within B158DRAFT_0658at 663.663 kb on - strand, within B158DRAFT_0658at 663.668 kb on + strand, within B158DRAFT_0658at 663.824 kb on - strand, within B158DRAFT_0658at 663.824 kb on - strand, within B158DRAFT_0658at 663.987 kb on - strand, within B158DRAFT_0658at 664.040 kb on + strandat 664.079 kb on + strandat 664.084 kb on + strandat 664.092 kb on - strandat 664.144 kb on - strandat 664.177 kb on - strandat 664.177 kb on - strandat 664.259 kb on - strand, within B158DRAFT_0659at 664.260 kb on - strand, within B158DRAFT_0659at 664.275 kb on + strand, within B158DRAFT_0659at 664.275 kb on + strand, within B158DRAFT_0659at 664.275 kb on + strand, within B158DRAFT_0659at 664.277 kb on - strand, within B158DRAFT_0659at 664.325 kb on + strand, within B158DRAFT_0659at 664.348 kb on - strand, within B158DRAFT_0659at 664.399 kb on - strand, within B158DRAFT_0659at 664.399 kb on - strand, within B158DRAFT_0659at 664.433 kb on + strand, within B158DRAFT_0659at 664.465 kb on + strand, within B158DRAFT_0659at 664.565 kb on + strand, within B158DRAFT_0659at 664.606 kb on - strand, within B158DRAFT_0659at 664.619 kb on - strand, within B158DRAFT_0659at 664.640 kb on - strand, within B158DRAFT_0659at 664.683 kb on + strand, within B158DRAFT_0659at 664.699 kb on - strand, within B158DRAFT_0659at 664.974 kb on + strandat 664.974 kb on + strandat 664.981 kb on + strandat 665.044 kb on + strandat 665.044 kb on + strandat 665.052 kb on - strandat 665.052 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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662,312 + +0.0
662,349 - -0.1
662,349 - -0.9
662,349 - -2.9
662,424 + -1.1
662,432 - +1.0
662,445 + -1.4
662,445 + +3.0
662,453 - -1.6
662,485 + -0.3
662,508 + -0.3
662,532 + -0.2
662,699 - B158DRAFT_0657 0.19 +0.2
662,699 - B158DRAFT_0657 0.19 -0.6
662,730 - B158DRAFT_0657 0.24 -0.6
662,759 - B158DRAFT_0657 0.28 -0.5
662,785 - B158DRAFT_0657 0.32 -0.3
662,785 - B158DRAFT_0657 0.32 -0.0
662,826 + B158DRAFT_0657 0.38 -0.4
662,826 + B158DRAFT_0657 0.38 +0.3
662,850 + B158DRAFT_0657 0.41 -0.5
662,858 - B158DRAFT_0657 0.42 -0.9
662,858 - B158DRAFT_0657 0.42 -0.3
662,884 + B158DRAFT_0657 0.46 -0.8
662,889 + B158DRAFT_0657 0.47 -0.2
662,889 + B158DRAFT_0657 0.47 -0.8
662,894 + B158DRAFT_0657 0.47 -1.4
662,894 + B158DRAFT_0657 0.47 +0.4
662,894 + B158DRAFT_0657 0.47 -0.2
662,897 - B158DRAFT_0657 0.48 -1.5
662,902 - B158DRAFT_0657 0.49 +0.3
662,902 - B158DRAFT_0657 0.49 -1.6
662,902 - B158DRAFT_0657 0.49 -0.0
662,986 - B158DRAFT_0657 0.61 +0.3
662,986 - B158DRAFT_0657 0.61 -0.3
663,094 + B158DRAFT_0657 0.76 -0.9
663,094 + B158DRAFT_0657 0.76 +1.3
663,094 + B158DRAFT_0657 0.76 -2.2
663,094 + B158DRAFT_0657 0.76 +0.7
663,102 - B158DRAFT_0657 0.77 +1.6
663,125 - B158DRAFT_0657 0.81 +1.2
663,133 - B158DRAFT_0657 0.82 -0.7
663,133 - B158DRAFT_0657 0.82 -0.0
663,133 - B158DRAFT_0657 0.82 +0.1
663,199 + -1.4
663,202 - -1.4
663,202 - +0.0
663,207 - +0.1
663,251 - -3.1
663,256 + +0.2
663,261 + -1.9
663,264 - +0.4
663,264 - +1.4
663,269 - +1.6
663,276 + -1.6
663,364 + B158DRAFT_0658 0.12 +1.0
663,438 + B158DRAFT_0658 0.20 -0.9
663,518 + B158DRAFT_0658 0.30 +0.2
663,536 + B158DRAFT_0658 0.32 +1.1
663,536 + B158DRAFT_0658 0.32 -0.5
663,544 - B158DRAFT_0658 0.33 +0.8
663,655 + B158DRAFT_0658 0.46 -0.5
663,663 - B158DRAFT_0658 0.47 -1.2
663,668 + B158DRAFT_0658 0.47 +0.5
663,824 - B158DRAFT_0658 0.65 -1.4
663,824 - B158DRAFT_0658 0.65 -0.5
663,987 - B158DRAFT_0658 0.84 -0.3
664,040 + -0.2
664,079 + -0.3
664,084 + -0.2
664,092 - +0.6
664,144 - -1.5
664,177 - -1.7
664,177 - +1.0
664,259 - B158DRAFT_0659 0.16 -1.0
664,260 - B158DRAFT_0659 0.16 -2.3
664,275 + B158DRAFT_0659 0.18 +3.6
664,275 + B158DRAFT_0659 0.18 -1.0
664,275 + B158DRAFT_0659 0.18 -1.9
664,277 - B158DRAFT_0659 0.18 +0.9
664,325 + B158DRAFT_0659 0.25 -0.8
664,348 - B158DRAFT_0659 0.28 +0.8
664,399 - B158DRAFT_0659 0.34 -1.1
664,399 - B158DRAFT_0659 0.34 -0.0
664,433 + B158DRAFT_0659 0.38 +2.6
664,465 + B158DRAFT_0659 0.43 -0.5
664,565 + B158DRAFT_0659 0.55 -2.8
664,606 - B158DRAFT_0659 0.61 +1.8
664,619 - B158DRAFT_0659 0.62 +0.4
664,640 - B158DRAFT_0659 0.65 -0.6
664,683 + B158DRAFT_0659 0.71 -0.3
664,699 - B158DRAFT_0659 0.73 +0.2
664,974 + +0.2
664,974 + -1.4
664,981 + +0.1
665,044 + +1.6
665,044 + -2.8
665,052 - -0.3
665,052 - -0.1

Or see this region's nucleotide sequence