Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0570

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0569 and B158DRAFT_0570 are separated by 276 nucleotidesB158DRAFT_0570 and B158DRAFT_0571 are separated by 27 nucleotides B158DRAFT_0569: B158DRAFT_0569 - Predicted membrane protein, at 573,735 to 574,958 _0569 B158DRAFT_0570: B158DRAFT_0570 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 575,235 to 576,191 _0570 B158DRAFT_0571: B158DRAFT_0571 - hypothetical protein, at 576,219 to 577,136 _0571 Position (kb) 575 576 577Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 574.247 kb on + strand, within B158DRAFT_0569at 574.274 kb on - strand, within B158DRAFT_0569at 574.300 kb on - strand, within B158DRAFT_0569at 574.301 kb on - strand, within B158DRAFT_0569at 574.336 kb on - strand, within B158DRAFT_0569at 574.346 kb on + strand, within B158DRAFT_0569at 574.371 kb on + strand, within B158DRAFT_0569at 574.372 kb on + strand, within B158DRAFT_0569at 574.378 kb on + strand, within B158DRAFT_0569at 574.386 kb on - strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.405 kb on + strand, within B158DRAFT_0569at 574.413 kb on - strand, within B158DRAFT_0569at 574.413 kb on - strand, within B158DRAFT_0569at 574.413 kb on - strand, within B158DRAFT_0569at 574.413 kb on - strand, within B158DRAFT_0569at 574.413 kb on - strand, within B158DRAFT_0569at 574.413 kb on - strand, within B158DRAFT_0569at 574.446 kb on + strand, within B158DRAFT_0569at 574.486 kb on - strand, within B158DRAFT_0569at 574.567 kb on + strand, within B158DRAFT_0569at 574.572 kb on + strand, within B158DRAFT_0569at 574.602 kb on + strand, within B158DRAFT_0569at 574.605 kb on - strand, within B158DRAFT_0569at 574.610 kb on - strand, within B158DRAFT_0569at 574.610 kb on - strand, within B158DRAFT_0569at 574.622 kb on + strand, within B158DRAFT_0569at 574.672 kb on + strand, within B158DRAFT_0569at 574.680 kb on - strand, within B158DRAFT_0569at 574.684 kb on + strand, within B158DRAFT_0569at 574.692 kb on - strand, within B158DRAFT_0569at 574.692 kb on - strand, within B158DRAFT_0569at 574.729 kb on + strand, within B158DRAFT_0569at 574.737 kb on - strand, within B158DRAFT_0569at 574.749 kb on + strand, within B158DRAFT_0569at 574.777 kb on + strand, within B158DRAFT_0569at 574.782 kb on + strand, within B158DRAFT_0569at 574.790 kb on - strand, within B158DRAFT_0569at 574.925 kb on + strandat 574.928 kb on - strandat 574.933 kb on + strandat 575.028 kb on + strandat 575.090 kb on + strandat 575.111 kb on + strandat 575.134 kb on + strandat 575.142 kb on - strandat 575.280 kb on - strandat 575.285 kb on + strandat 575.293 kb on - strandat 575.325 kb on - strandat 575.344 kb on + strand, within B158DRAFT_0570at 575.381 kb on + strand, within B158DRAFT_0570at 575.409 kb on - strand, within B158DRAFT_0570at 575.420 kb on + strand, within B158DRAFT_0570at 575.470 kb on - strand, within B158DRAFT_0570at 575.478 kb on - strand, within B158DRAFT_0570at 575.481 kb on + strand, within B158DRAFT_0570at 575.541 kb on - strand, within B158DRAFT_0570at 575.588 kb on + strand, within B158DRAFT_0570at 575.596 kb on - strand, within B158DRAFT_0570at 575.613 kb on + strand, within B158DRAFT_0570at 575.621 kb on - strand, within B158DRAFT_0570at 575.623 kb on + strand, within B158DRAFT_0570at 575.644 kb on - strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.725 kb on + strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.733 kb on - strand, within B158DRAFT_0570at 575.759 kb on - strand, within B158DRAFT_0570at 575.775 kb on + strand, within B158DRAFT_0570at 575.792 kb on + strand, within B158DRAFT_0570at 575.792 kb on + strand, within B158DRAFT_0570at 575.800 kb on - strand, within B158DRAFT_0570at 575.834 kb on - strand, within B158DRAFT_0570at 575.837 kb on - strand, within B158DRAFT_0570at 575.896 kb on + strand, within B158DRAFT_0570at 575.896 kb on + strand, within B158DRAFT_0570at 575.899 kb on - strand, within B158DRAFT_0570at 575.951 kb on + strand, within B158DRAFT_0570at 575.967 kb on + strand, within B158DRAFT_0570at 576.055 kb on - strand, within B158DRAFT_0570at 576.064 kb on - strand, within B158DRAFT_0570at 576.075 kb on - strand, within B158DRAFT_0570at 576.243 kb on - strandat 576.251 kb on - strandat 576.251 kb on - strandat 576.373 kb on + strand, within B158DRAFT_0571at 576.383 kb on + strand, within B158DRAFT_0571at 576.466 kb on + strand, within B158DRAFT_0571at 576.474 kb on - strand, within B158DRAFT_0571at 576.527 kb on + strand, within B158DRAFT_0571at 576.543 kb on - strand, within B158DRAFT_0571at 576.543 kb on - strand, within B158DRAFT_0571at 576.687 kb on - strand, within B158DRAFT_0571at 576.721 kb on - strand, within B158DRAFT_0571at 576.729 kb on + strand, within B158DRAFT_0571at 576.729 kb on + strand, within B158DRAFT_0571at 576.729 kb on + strand, within B158DRAFT_0571at 576.729 kb on + strand, within B158DRAFT_0571at 576.737 kb on - strand, within B158DRAFT_0571at 576.737 kb on - strand, within B158DRAFT_0571at 576.737 kb on - strand, within B158DRAFT_0571at 576.769 kb on - strand, within B158DRAFT_0571at 576.815 kb on - strand, within B158DRAFT_0571at 576.815 kb on - strand, within B158DRAFT_0571at 576.952 kb on + strand, within B158DRAFT_0571at 577.078 kb on + strandat 577.103 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
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574,247 + B158DRAFT_0569 0.42 -0.1
574,274 - B158DRAFT_0569 0.44 +0.0
574,300 - B158DRAFT_0569 0.46 -1.3
574,301 - B158DRAFT_0569 0.46 +2.2
574,336 - B158DRAFT_0569 0.49 -0.1
574,346 + B158DRAFT_0569 0.50 -1.6
574,371 + B158DRAFT_0569 0.52 -0.1
574,372 + B158DRAFT_0569 0.52 -0.5
574,378 + B158DRAFT_0569 0.53 -1.5
574,386 - B158DRAFT_0569 0.53 +0.2
574,405 + B158DRAFT_0569 0.55 +0.4
574,405 + B158DRAFT_0569 0.55 -2.4
574,405 + B158DRAFT_0569 0.55 +1.0
574,405 + B158DRAFT_0569 0.55 +2.5
574,405 + B158DRAFT_0569 0.55 +1.0
574,405 + B158DRAFT_0569 0.55 -0.9
574,405 + B158DRAFT_0569 0.55 -1.4
574,405 + B158DRAFT_0569 0.55 +0.2
574,413 - B158DRAFT_0569 0.55 +0.2
574,413 - B158DRAFT_0569 0.55 -0.4
574,413 - B158DRAFT_0569 0.55 +1.9
574,413 - B158DRAFT_0569 0.55 -2.0
574,413 - B158DRAFT_0569 0.55 -1.3
574,413 - B158DRAFT_0569 0.55 +0.4
574,446 + B158DRAFT_0569 0.58 -0.8
574,486 - B158DRAFT_0569 0.61 -0.6
574,567 + B158DRAFT_0569 0.68 -1.0
574,572 + B158DRAFT_0569 0.68 -0.7
574,602 + B158DRAFT_0569 0.71 -0.3
574,605 - B158DRAFT_0569 0.71 -0.1
574,610 - B158DRAFT_0569 0.71 -1.2
574,610 - B158DRAFT_0569 0.71 -0.7
574,622 + B158DRAFT_0569 0.72 -1.3
574,672 + B158DRAFT_0569 0.77 -1.0
574,680 - B158DRAFT_0569 0.77 -0.5
574,684 + B158DRAFT_0569 0.78 -0.3
574,692 - B158DRAFT_0569 0.78 +0.5
574,692 - B158DRAFT_0569 0.78 -1.3
574,729 + B158DRAFT_0569 0.81 -1.0
574,737 - B158DRAFT_0569 0.82 -2.1
574,749 + B158DRAFT_0569 0.83 -0.6
574,777 + B158DRAFT_0569 0.85 -0.8
574,782 + B158DRAFT_0569 0.86 +0.0
574,790 - B158DRAFT_0569 0.86 -0.2
574,925 + -1.1
574,928 - -0.8
574,933 + +0.7
575,028 + -1.0
575,090 + -0.7
575,111 + -0.9
575,134 + +2.1
575,142 - -0.6
575,280 - -1.1
575,285 + -1.2
575,293 - -0.7
575,325 - -0.5
575,344 + B158DRAFT_0570 0.11 +2.5
575,381 + B158DRAFT_0570 0.15 -0.2
575,409 - B158DRAFT_0570 0.18 -0.2
575,420 + B158DRAFT_0570 0.19 -1.1
575,470 - B158DRAFT_0570 0.25 -1.5
575,478 - B158DRAFT_0570 0.25 +0.0
575,481 + B158DRAFT_0570 0.26 -1.3
575,541 - B158DRAFT_0570 0.32 -0.5
575,588 + B158DRAFT_0570 0.37 -0.4
575,596 - B158DRAFT_0570 0.38 -0.0
575,613 + B158DRAFT_0570 0.39 -0.6
575,621 - B158DRAFT_0570 0.40 +0.9
575,623 + B158DRAFT_0570 0.41 -0.6
575,644 - B158DRAFT_0570 0.43 -1.1
575,725 + B158DRAFT_0570 0.51 -0.7
575,725 + B158DRAFT_0570 0.51 -1.1
575,725 + B158DRAFT_0570 0.51 +0.1
575,725 + B158DRAFT_0570 0.51 +0.6
575,725 + B158DRAFT_0570 0.51 +0.3
575,725 + B158DRAFT_0570 0.51 +0.2
575,725 + B158DRAFT_0570 0.51 +0.9
575,725 + B158DRAFT_0570 0.51 +0.1
575,725 + B158DRAFT_0570 0.51 +0.4
575,733 - B158DRAFT_0570 0.52 +0.4
575,733 - B158DRAFT_0570 0.52 -0.6
575,733 - B158DRAFT_0570 0.52 -0.6
575,733 - B158DRAFT_0570 0.52 -1.6
575,733 - B158DRAFT_0570 0.52 +1.3
575,733 - B158DRAFT_0570 0.52 -0.2
575,733 - B158DRAFT_0570 0.52 +0.2
575,733 - B158DRAFT_0570 0.52 -1.1
575,733 - B158DRAFT_0570 0.52 -0.8
575,733 - B158DRAFT_0570 0.52 -0.3
575,733 - B158DRAFT_0570 0.52 -2.8
575,733 - B158DRAFT_0570 0.52 -1.3
575,733 - B158DRAFT_0570 0.52 -1.6
575,733 - B158DRAFT_0570 0.52 -2.3
575,733 - B158DRAFT_0570 0.52 +2.7
575,759 - B158DRAFT_0570 0.55 -1.6
575,775 + B158DRAFT_0570 0.56 -0.5
575,792 + B158DRAFT_0570 0.58 -0.6
575,792 + B158DRAFT_0570 0.58 -1.3
575,800 - B158DRAFT_0570 0.59 -0.8
575,834 - B158DRAFT_0570 0.63 -1.5
575,837 - B158DRAFT_0570 0.63 +1.0
575,896 + B158DRAFT_0570 0.69 +0.4
575,896 + B158DRAFT_0570 0.69 +1.5
575,899 - B158DRAFT_0570 0.69 +0.2
575,951 + B158DRAFT_0570 0.75 +1.0
575,967 + B158DRAFT_0570 0.76 -0.1
576,055 - B158DRAFT_0570 0.86 -1.3
576,064 - B158DRAFT_0570 0.87 -3.6
576,075 - B158DRAFT_0570 0.88 +0.9
576,243 - -2.1
576,251 - +0.6
576,251 - -1.0
576,373 + B158DRAFT_0571 0.17 +2.7
576,383 + B158DRAFT_0571 0.18 -1.2
576,466 + B158DRAFT_0571 0.27 -0.3
576,474 - B158DRAFT_0571 0.28 -0.5
576,527 + B158DRAFT_0571 0.34 +2.5
576,543 - B158DRAFT_0571 0.35 +0.5
576,543 - B158DRAFT_0571 0.35 +1.5
576,687 - B158DRAFT_0571 0.51 -0.0
576,721 - B158DRAFT_0571 0.55 -1.8
576,729 + B158DRAFT_0571 0.56 -0.9
576,729 + B158DRAFT_0571 0.56 -0.4
576,729 + B158DRAFT_0571 0.56 -0.7
576,729 + B158DRAFT_0571 0.56 +0.9
576,737 - B158DRAFT_0571 0.56 +0.4
576,737 - B158DRAFT_0571 0.56 +1.7
576,737 - B158DRAFT_0571 0.56 -1.3
576,769 - B158DRAFT_0571 0.60 -0.7
576,815 - B158DRAFT_0571 0.65 +0.3
576,815 - B158DRAFT_0571 0.65 -1.0
576,952 + B158DRAFT_0571 0.80 -1.6
577,078 + +0.3
577,103 + -0.9

Or see this region's nucleotide sequence