Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0376

Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0375 and B158DRAFT_0376 are separated by 38 nucleotidesB158DRAFT_0376 and B158DRAFT_0377 are separated by 272 nucleotides B158DRAFT_0375: B158DRAFT_0375 - hypothetical protein, at 380,021 to 381,292 _0375 B158DRAFT_0376: B158DRAFT_0376 - CAAX amino terminal protease family., at 381,331 to 382,020 _0376 B158DRAFT_0377: B158DRAFT_0377 - glucose-inhibited division protein A, at 382,293 to 384,179 _0377 Position (kb) 381 382 383Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 380.457 kb on - strand, within B158DRAFT_0375at 380.603 kb on - strand, within B158DRAFT_0375at 380.693 kb on - strand, within B158DRAFT_0375at 380.930 kb on - strand, within B158DRAFT_0375at 380.932 kb on + strand, within B158DRAFT_0375at 380.940 kb on - strand, within B158DRAFT_0375at 380.989 kb on - strand, within B158DRAFT_0375at 381.043 kb on + strand, within B158DRAFT_0375at 381.084 kb on + strand, within B158DRAFT_0375at 381.247 kb on - strandat 381.333 kb on + strandat 381.387 kb on + strandat 381.432 kb on + strand, within B158DRAFT_0376at 381.450 kb on + strand, within B158DRAFT_0376at 381.458 kb on - strand, within B158DRAFT_0376at 381.488 kb on - strand, within B158DRAFT_0376at 381.495 kb on + strand, within B158DRAFT_0376at 381.498 kb on + strand, within B158DRAFT_0376at 381.584 kb on - strand, within B158DRAFT_0376at 381.662 kb on - strand, within B158DRAFT_0376at 381.738 kb on + strand, within B158DRAFT_0376at 381.767 kb on + strand, within B158DRAFT_0376at 381.767 kb on + strand, within B158DRAFT_0376at 381.775 kb on - strand, within B158DRAFT_0376at 381.775 kb on - strand, within B158DRAFT_0376at 381.843 kb on + strand, within B158DRAFT_0376at 381.843 kb on + strand, within B158DRAFT_0376at 381.843 kb on - strand, within B158DRAFT_0376at 381.852 kb on + strand, within B158DRAFT_0376at 381.882 kb on + strand, within B158DRAFT_0376at 381.882 kb on + strand, within B158DRAFT_0376at 381.890 kb on - strand, within B158DRAFT_0376at 381.890 kb on - strand, within B158DRAFT_0376at 381.927 kb on + strand, within B158DRAFT_0376at 381.955 kb on - strandat 381.962 kb on - strandat 381.968 kb on - strandat 381.970 kb on + strandat 381.978 kb on - strandat 381.983 kb on - strandat 381.983 kb on - strandat 382.103 kb on - strandat 382.169 kb on + strandat 382.169 kb on + strandat 382.169 kb on + strandat 382.177 kb on - strandat 382.177 kb on - strandat 382.177 kb on - strandat 382.177 kb on - strandat 382.177 kb on - strandat 382.202 kb on + strandat 382.215 kb on + strandat 382.215 kb on + strandat 382.223 kb on - strandat 382.223 kb on - strandat 382.223 kb on - strandat 382.227 kb on + strandat 382.228 kb on + strandat 382.228 kb on + strandat 382.236 kb on - strandat 382.236 kb on - strandat 382.236 kb on - strandat 382.240 kb on + strandat 382.243 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.248 kb on - strandat 382.264 kb on + strandat 382.269 kb on + strandat 382.269 kb on + strandat 382.277 kb on - strandat 382.277 kb on - strandat 382.277 kb on - strandat 382.277 kb on - strandat 382.277 kb on - strandat 382.356 kb on + strandat 382.356 kb on + strandat 382.356 kb on + strandat 382.356 kb on + strandat 382.356 kb on + strandat 382.364 kb on - strandat 382.364 kb on - strandat 382.364 kb on - strandat 382.408 kb on - strandat 382.415 kb on - strandat 382.419 kb on + strandat 382.424 kb on + strandat 382.424 kb on + strandat 382.424 kb on + strandat 382.424 kb on + strandat 382.427 kb on - strandat 382.437 kb on - strandat 382.437 kb on - strandat 382.462 kb on - strandat 382.463 kb on - strandat 382.463 kb on - strandat 382.480 kb on + strandat 382.490 kb on + strand, within B158DRAFT_0377at 382.495 kb on + strand, within B158DRAFT_0377at 382.498 kb on - strand, within B158DRAFT_0377at 382.503 kb on - strand, within B158DRAFT_0377at 382.558 kb on + strand, within B158DRAFT_0377at 382.566 kb on - strand, within B158DRAFT_0377at 382.580 kb on + strand, within B158DRAFT_0377at 382.580 kb on + strand, within B158DRAFT_0377at 382.580 kb on + strand, within B158DRAFT_0377at 382.660 kb on + strand, within B158DRAFT_0377at 382.688 kb on + strand, within B158DRAFT_0377at 382.688 kb on + strand, within B158DRAFT_0377at 382.688 kb on + strand, within B158DRAFT_0377at 382.688 kb on + strand, within B158DRAFT_0377at 382.688 kb on + strand, within B158DRAFT_0377at 382.696 kb on - strand, within B158DRAFT_0377at 382.696 kb on - strand, within B158DRAFT_0377at 382.696 kb on - strand, within B158DRAFT_0377at 382.696 kb on - strand, within B158DRAFT_0377at 382.696 kb on - strand, within B158DRAFT_0377at 382.696 kb on - strand, within B158DRAFT_0377at 382.696 kb on - strand, within B158DRAFT_0377at 382.696 kb on - strand, within B158DRAFT_0377at 382.696 kb on - strand, within B158DRAFT_0377at 382.702 kb on - strand, within B158DRAFT_0377at 382.712 kb on - strand, within B158DRAFT_0377at 382.717 kb on - strand, within B158DRAFT_0377at 382.717 kb on - strand, within B158DRAFT_0377at 382.718 kb on - strand, within B158DRAFT_0377at 382.719 kb on + strand, within B158DRAFT_0377at 382.746 kb on + strand, within B158DRAFT_0377at 382.747 kb on + strand, within B158DRAFT_0377at 382.754 kb on + strand, within B158DRAFT_0377at 382.767 kb on - strand, within B158DRAFT_0377at 382.799 kb on + strand, within B158DRAFT_0377at 382.807 kb on - strand, within B158DRAFT_0377at 382.845 kb on - strand, within B158DRAFT_0377at 382.849 kb on - strand, within B158DRAFT_0377at 382.888 kb on + strand, within B158DRAFT_0377at 382.888 kb on + strand, within B158DRAFT_0377at 382.888 kb on - strand, within B158DRAFT_0377at 382.896 kb on - strand, within B158DRAFT_0377at 382.957 kb on + strand, within B158DRAFT_0377at 382.958 kb on - strand, within B158DRAFT_0377at 382.962 kb on + strand, within B158DRAFT_0377at 382.982 kb on + strand, within B158DRAFT_0377at 382.984 kb on - strand, within B158DRAFT_0377at 382.987 kb on + strand, within B158DRAFT_0377at 382.995 kb on - strand, within B158DRAFT_0377at 383.007 kb on - strand, within B158DRAFT_0377

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol%
remove
380,457 - B158DRAFT_0375 0.34 +2.6
380,603 - B158DRAFT_0375 0.46 +0.1
380,693 - B158DRAFT_0375 0.53 +0.4
380,930 - B158DRAFT_0375 0.71 -0.5
380,932 + B158DRAFT_0375 0.72 -0.4
380,940 - B158DRAFT_0375 0.72 -1.3
380,989 - B158DRAFT_0375 0.76 -0.7
381,043 + B158DRAFT_0375 0.80 +0.3
381,084 + B158DRAFT_0375 0.84 -0.2
381,247 - +0.3
381,333 + +0.3
381,387 + -0.3
381,432 + B158DRAFT_0376 0.15 +1.2
381,450 + B158DRAFT_0376 0.17 +0.2
381,458 - B158DRAFT_0376 0.18 -1.1
381,488 - B158DRAFT_0376 0.23 -2.4
381,495 + B158DRAFT_0376 0.24 +0.8
381,498 + B158DRAFT_0376 0.24 +0.9
381,584 - B158DRAFT_0376 0.37 +0.1
381,662 - B158DRAFT_0376 0.48 +0.9
381,738 + B158DRAFT_0376 0.59 -0.2
381,767 + B158DRAFT_0376 0.63 -0.4
381,767 + B158DRAFT_0376 0.63 +1.3
381,775 - B158DRAFT_0376 0.64 +0.2
381,775 - B158DRAFT_0376 0.64 +1.6
381,843 + B158DRAFT_0376 0.74 +1.1
381,843 + B158DRAFT_0376 0.74 -1.1
381,843 - B158DRAFT_0376 0.74 -0.5
381,852 + B158DRAFT_0376 0.76 -0.2
381,882 + B158DRAFT_0376 0.80 +2.8
381,882 + B158DRAFT_0376 0.80 +0.8
381,890 - B158DRAFT_0376 0.81 -1.3
381,890 - B158DRAFT_0376 0.81 +2.0
381,927 + B158DRAFT_0376 0.86 +0.6
381,955 - +1.4
381,962 - +1.2
381,968 - -0.9
381,970 + +0.5
381,978 - -0.7
381,983 - +5.2
381,983 - +5.8
382,103 - -0.1
382,169 + -0.4
382,169 + -0.3
382,169 + -1.3
382,177 - -1.2
382,177 - -1.8
382,177 - -1.9
382,177 - +1.4
382,177 - +0.1
382,202 + +0.1
382,215 + -0.4
382,215 + +0.1
382,223 - +2.3
382,223 - +4.0
382,223 - +4.3
382,227 + +0.2
382,228 + -1.2
382,228 + -2.9
382,236 - +4.4
382,236 - +2.8
382,236 - +3.6
382,240 + +0.5
382,243 - -0.8
382,248 - -0.2
382,248 - -0.9
382,248 - +0.5
382,248 - -0.7
382,248 - -0.4
382,248 - +1.4
382,248 - -1.6
382,248 - -0.1
382,248 - +0.2
382,264 + -1.1
382,269 + +0.5
382,269 + -1.8
382,277 - +4.8
382,277 - +4.7
382,277 - +4.8
382,277 - +4.7
382,277 - +4.8
382,356 + +4.5
382,356 + +3.9
382,356 + +3.2
382,356 + +3.9
382,356 + +1.9
382,364 - +5.2
382,364 - +5.0
382,364 - +4.7
382,408 - +4.1
382,415 - +5.3
382,419 + +4.5
382,424 + +5.0
382,424 + +4.6
382,424 + +3.1
382,424 + +4.5
382,427 - +5.8
382,437 - +5.5
382,437 - +5.4
382,462 - +5.0
382,463 - +5.3
382,463 - +4.9
382,480 + +4.1
382,490 + B158DRAFT_0377 0.10 +3.9
382,495 + B158DRAFT_0377 0.11 +4.6
382,498 - B158DRAFT_0377 0.11 +4.7
382,503 - B158DRAFT_0377 0.11 +6.3
382,558 + B158DRAFT_0377 0.14 +5.0
382,566 - B158DRAFT_0377 0.14 +5.1
382,580 + B158DRAFT_0377 0.15 +4.6
382,580 + B158DRAFT_0377 0.15 +3.7
382,580 + B158DRAFT_0377 0.15 +4.1
382,660 + B158DRAFT_0377 0.19 +4.7
382,688 + B158DRAFT_0377 0.21 +4.0
382,688 + B158DRAFT_0377 0.21 +3.7
382,688 + B158DRAFT_0377 0.21 +3.7
382,688 + B158DRAFT_0377 0.21 +2.3
382,688 + B158DRAFT_0377 0.21 +3.3
382,696 - B158DRAFT_0377 0.21 +5.4
382,696 - B158DRAFT_0377 0.21 +4.8
382,696 - B158DRAFT_0377 0.21 +5.1
382,696 - B158DRAFT_0377 0.21 +4.7
382,696 - B158DRAFT_0377 0.21 +5.3
382,696 - B158DRAFT_0377 0.21 +5.6
382,696 - B158DRAFT_0377 0.21 +5.2
382,696 - B158DRAFT_0377 0.21 +5.4
382,696 - B158DRAFT_0377 0.21 +5.2
382,702 - B158DRAFT_0377 0.22 +4.4
382,712 - B158DRAFT_0377 0.22 +6.0
382,717 - B158DRAFT_0377 0.22 +4.6
382,717 - B158DRAFT_0377 0.22 +5.9
382,718 - B158DRAFT_0377 0.23 +4.8
382,719 + B158DRAFT_0377 0.23 +4.4
382,746 + B158DRAFT_0377 0.24 +4.4
382,747 + B158DRAFT_0377 0.24 +5.1
382,754 + B158DRAFT_0377 0.24 +4.3
382,767 - B158DRAFT_0377 0.25 +5.1
382,799 + B158DRAFT_0377 0.27 +4.0
382,807 - B158DRAFT_0377 0.27 +5.6
382,845 - B158DRAFT_0377 0.29 +6.0
382,849 - B158DRAFT_0377 0.29 +4.9
382,888 + B158DRAFT_0377 0.32 +3.8
382,888 + B158DRAFT_0377 0.32 +3.6
382,888 - B158DRAFT_0377 0.32 +5.5
382,896 - B158DRAFT_0377 0.32 +5.6
382,957 + B158DRAFT_0377 0.35 +4.2
382,958 - B158DRAFT_0377 0.35 +4.8
382,962 + B158DRAFT_0377 0.35 +3.9
382,982 + B158DRAFT_0377 0.37 +3.9
382,984 - B158DRAFT_0377 0.37 +5.6
382,987 + B158DRAFT_0377 0.37 +3.8
382,995 - B158DRAFT_0377 0.37 +5.2
383,007 - B158DRAFT_0377 0.38 +5.5

Or see this region's nucleotide sequence