Experiment: m.b. Dimethyl Sulfoxide 2.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0374 and B158DRAFT_0375 are separated by 240 nucleotides B158DRAFT_0375 and B158DRAFT_0376 are separated by 38 nucleotides
B158DRAFT_0374: B158DRAFT_0374 - Glycosyltransferases, probably involved in cell wall biogenesis, at 378,416 to 379,780
_0374
B158DRAFT_0375: B158DRAFT_0375 - hypothetical protein, at 380,021 to 381,292
_0375
B158DRAFT_0376: B158DRAFT_0376 - CAAX amino terminal protease family., at 381,331 to 382,020
_0376
Position (kb) 380
381
382 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6 at 379.023 kb on + strand, within B158DRAFT_0374 at 379.036 kb on - strand, within B158DRAFT_0374 at 379.050 kb on + strand, within B158DRAFT_0374 at 379.065 kb on + strand, within B158DRAFT_0374 at 379.065 kb on + strand, within B158DRAFT_0374 at 379.065 kb on + strand, within B158DRAFT_0374 at 379.065 kb on + strand, within B158DRAFT_0374 at 379.120 kb on + strand, within B158DRAFT_0374 at 379.120 kb on + strand, within B158DRAFT_0374 at 379.128 kb on - strand, within B158DRAFT_0374 at 379.130 kb on + strand, within B158DRAFT_0374 at 379.280 kb on + strand, within B158DRAFT_0374 at 379.287 kb on - strand, within B158DRAFT_0374 at 379.307 kb on - strand, within B158DRAFT_0374 at 379.326 kb on + strand, within B158DRAFT_0374 at 379.435 kb on + strand, within B158DRAFT_0374 at 379.435 kb on + strand, within B158DRAFT_0374 at 379.443 kb on - strand, within B158DRAFT_0374 at 379.455 kb on + strand, within B158DRAFT_0374 at 379.455 kb on + strand, within B158DRAFT_0374 at 379.455 kb on + strand, within B158DRAFT_0374 at 379.457 kb on + strand, within B158DRAFT_0374 at 379.462 kb on + strand, within B158DRAFT_0374 at 379.465 kb on - strand, within B158DRAFT_0374 at 379.493 kb on - strand, within B158DRAFT_0374 at 379.517 kb on - strand, within B158DRAFT_0374 at 379.517 kb on - strand, within B158DRAFT_0374 at 379.517 kb on - strand, within B158DRAFT_0374 at 379.526 kb on - strand, within B158DRAFT_0374 at 379.533 kb on - strand, within B158DRAFT_0374 at 379.545 kb on + strand, within B158DRAFT_0374 at 379.572 kb on - strand, within B158DRAFT_0374 at 379.676 kb on - strand at 379.720 kb on + strand at 379.720 kb on + strand at 379.720 kb on + strand at 379.720 kb on + strand at 379.720 kb on + strand at 379.728 kb on - strand at 379.728 kb on - strand at 379.741 kb on + strand at 379.846 kb on + strand at 379.854 kb on - strand at 379.856 kb on + strand at 379.856 kb on + strand at 379.864 kb on - strand at 379.899 kb on - strand at 379.919 kb on - strand at 380.017 kb on - strand at 380.047 kb on + strand at 380.055 kb on - strand at 380.100 kb on + strand at 380.105 kb on + strand at 380.127 kb on + strand at 380.134 kb on + strand at 380.238 kb on + strand, within B158DRAFT_0375 at 380.238 kb on + strand, within B158DRAFT_0375 at 380.238 kb on + strand, within B158DRAFT_0375 at 380.238 kb on + strand, within B158DRAFT_0375 at 380.238 kb on + strand, within B158DRAFT_0375 at 380.238 kb on + strand, within B158DRAFT_0375 at 380.238 kb on + strand, within B158DRAFT_0375 at 380.245 kb on - strand, within B158DRAFT_0375 at 380.246 kb on - strand, within B158DRAFT_0375 at 380.246 kb on - strand, within B158DRAFT_0375 at 380.246 kb on - strand, within B158DRAFT_0375 at 380.246 kb on - strand, within B158DRAFT_0375 at 380.246 kb on - strand, within B158DRAFT_0375 at 380.246 kb on - strand, within B158DRAFT_0375 at 380.246 kb on - strand, within B158DRAFT_0375 at 380.282 kb on - strand, within B158DRAFT_0375 at 380.310 kb on + strand, within B158DRAFT_0375 at 380.457 kb on - strand, within B158DRAFT_0375 at 380.603 kb on - strand, within B158DRAFT_0375 at 380.693 kb on - strand, within B158DRAFT_0375 at 380.930 kb on - strand, within B158DRAFT_0375 at 380.932 kb on + strand, within B158DRAFT_0375 at 380.940 kb on - strand, within B158DRAFT_0375 at 380.989 kb on - strand, within B158DRAFT_0375 at 381.043 kb on + strand, within B158DRAFT_0375 at 381.084 kb on + strand, within B158DRAFT_0375 at 381.247 kb on - strand at 381.333 kb on + strand at 381.387 kb on + strand at 381.432 kb on + strand, within B158DRAFT_0376 at 381.450 kb on + strand, within B158DRAFT_0376 at 381.458 kb on - strand, within B158DRAFT_0376 at 381.488 kb on - strand, within B158DRAFT_0376 at 381.495 kb on + strand, within B158DRAFT_0376 at 381.498 kb on + strand, within B158DRAFT_0376 at 381.584 kb on - strand, within B158DRAFT_0376 at 381.662 kb on - strand, within B158DRAFT_0376 at 381.738 kb on + strand, within B158DRAFT_0376 at 381.767 kb on + strand, within B158DRAFT_0376 at 381.767 kb on + strand, within B158DRAFT_0376 at 381.775 kb on - strand, within B158DRAFT_0376 at 381.775 kb on - strand, within B158DRAFT_0376 at 381.843 kb on + strand, within B158DRAFT_0376 at 381.843 kb on + strand, within B158DRAFT_0376 at 381.843 kb on - strand, within B158DRAFT_0376 at 381.852 kb on + strand, within B158DRAFT_0376 at 381.882 kb on + strand, within B158DRAFT_0376 at 381.882 kb on + strand, within B158DRAFT_0376 at 381.890 kb on - strand, within B158DRAFT_0376 at 381.890 kb on - strand, within B158DRAFT_0376 at 381.927 kb on + strand, within B158DRAFT_0376 at 381.955 kb on - strand at 381.962 kb on - strand at 381.968 kb on - strand at 381.970 kb on + strand at 381.978 kb on - strand at 381.983 kb on - strand at 381.983 kb on - strand at 382.103 kb on - strand at 382.169 kb on + strand at 382.169 kb on + strand at 382.169 kb on + strand at 382.177 kb on - strand at 382.177 kb on - strand at 382.177 kb on - strand at 382.177 kb on - strand at 382.177 kb on - strand at 382.202 kb on + strand at 382.215 kb on + strand at 382.215 kb on + strand at 382.223 kb on - strand at 382.223 kb on - strand at 382.223 kb on - strand at 382.227 kb on + strand at 382.228 kb on + strand at 382.228 kb on + strand at 382.236 kb on - strand at 382.236 kb on - strand at 382.236 kb on - strand at 382.240 kb on + strand at 382.243 kb on - strand at 382.248 kb on - strand at 382.248 kb on - strand at 382.248 kb on - strand at 382.248 kb on - strand at 382.248 kb on - strand at 382.248 kb on - strand at 382.248 kb on - strand at 382.248 kb on - strand at 382.248 kb on - strand at 382.264 kb on + strand at 382.269 kb on + strand at 382.269 kb on + strand at 382.277 kb on - strand at 382.277 kb on - strand at 382.277 kb on - strand at 382.277 kb on - strand at 382.277 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 2.5 vol% remove 379,023 + B158DRAFT_0374 0.44 -1.6 379,036 - B158DRAFT_0374 0.45 -0.6 379,050 + B158DRAFT_0374 0.46 +0.9 379,065 + B158DRAFT_0374 0.48 +0.4 379,065 + B158DRAFT_0374 0.48 -2.1 379,065 + B158DRAFT_0374 0.48 -0.8 379,065 + B158DRAFT_0374 0.48 -1.5 379,120 + B158DRAFT_0374 0.52 -0.3 379,120 + B158DRAFT_0374 0.52 -1.0 379,128 - B158DRAFT_0374 0.52 +5.1 379,130 + B158DRAFT_0374 0.52 -2.0 379,280 + B158DRAFT_0374 0.63 +0.2 379,287 - B158DRAFT_0374 0.64 +0.4 379,307 - B158DRAFT_0374 0.65 +0.8 379,326 + B158DRAFT_0374 0.67 -1.2 379,435 + B158DRAFT_0374 0.75 +1.0 379,435 + B158DRAFT_0374 0.75 +0.6 379,443 - B158DRAFT_0374 0.75 +1.4 379,455 + B158DRAFT_0374 0.76 -0.2 379,455 + B158DRAFT_0374 0.76 +0.9 379,455 + B158DRAFT_0374 0.76 -0.3 379,457 + B158DRAFT_0374 0.76 -1.7 379,462 + B158DRAFT_0374 0.77 +0.4 379,465 - B158DRAFT_0374 0.77 -1.5 379,493 - B158DRAFT_0374 0.79 -0.3 379,517 - B158DRAFT_0374 0.81 +0.8 379,517 - B158DRAFT_0374 0.81 +0.1 379,517 - B158DRAFT_0374 0.81 +1.1 379,526 - B158DRAFT_0374 0.81 +0.0 379,533 - B158DRAFT_0374 0.82 +0.6 379,545 + B158DRAFT_0374 0.83 -0.8 379,572 - B158DRAFT_0374 0.85 +0.1 379,676 - -0.7 379,720 + -0.7 379,720 + -0.5 379,720 + +1.4 379,720 + -1.6 379,720 + -0.3 379,728 - -0.2 379,728 - -0.4 379,741 + +0.2 379,846 + +0.1 379,854 - +0.3 379,856 + +1.5 379,856 + +0.0 379,864 - -0.3 379,899 - -1.8 379,919 - -0.6 380,017 - -0.8 380,047 + -0.5 380,055 - +0.8 380,100 + +0.3 380,105 + +0.9 380,127 + +1.6 380,134 + +1.5 380,238 + B158DRAFT_0375 0.17 +0.8 380,238 + B158DRAFT_0375 0.17 +0.5 380,238 + B158DRAFT_0375 0.17 +0.9 380,238 + B158DRAFT_0375 0.17 +1.5 380,238 + B158DRAFT_0375 0.17 +0.2 380,238 + B158DRAFT_0375 0.17 -1.0 380,238 + B158DRAFT_0375 0.17 +0.3 380,245 - B158DRAFT_0375 0.18 +0.6 380,246 - B158DRAFT_0375 0.18 +0.8 380,246 - B158DRAFT_0375 0.18 +0.4 380,246 - B158DRAFT_0375 0.18 +0.3 380,246 - B158DRAFT_0375 0.18 +0.9 380,246 - B158DRAFT_0375 0.18 -1.1 380,246 - B158DRAFT_0375 0.18 +2.0 380,246 - B158DRAFT_0375 0.18 +0.5 380,282 - B158DRAFT_0375 0.21 +0.9 380,310 + B158DRAFT_0375 0.23 +2.0 380,457 - B158DRAFT_0375 0.34 +2.6 380,603 - B158DRAFT_0375 0.46 +0.1 380,693 - B158DRAFT_0375 0.53 +0.4 380,930 - B158DRAFT_0375 0.71 -0.5 380,932 + B158DRAFT_0375 0.72 -0.4 380,940 - B158DRAFT_0375 0.72 -1.3 380,989 - B158DRAFT_0375 0.76 -0.7 381,043 + B158DRAFT_0375 0.80 +0.3 381,084 + B158DRAFT_0375 0.84 -0.2 381,247 - +0.3 381,333 + +0.3 381,387 + -0.3 381,432 + B158DRAFT_0376 0.15 +1.2 381,450 + B158DRAFT_0376 0.17 +0.2 381,458 - B158DRAFT_0376 0.18 -1.1 381,488 - B158DRAFT_0376 0.23 -2.4 381,495 + B158DRAFT_0376 0.24 +0.8 381,498 + B158DRAFT_0376 0.24 +0.9 381,584 - B158DRAFT_0376 0.37 +0.1 381,662 - B158DRAFT_0376 0.48 +0.9 381,738 + B158DRAFT_0376 0.59 -0.2 381,767 + B158DRAFT_0376 0.63 -0.4 381,767 + B158DRAFT_0376 0.63 +1.3 381,775 - B158DRAFT_0376 0.64 +0.2 381,775 - B158DRAFT_0376 0.64 +1.6 381,843 + B158DRAFT_0376 0.74 +1.1 381,843 + B158DRAFT_0376 0.74 -1.1 381,843 - B158DRAFT_0376 0.74 -0.5 381,852 + B158DRAFT_0376 0.76 -0.2 381,882 + B158DRAFT_0376 0.80 +2.8 381,882 + B158DRAFT_0376 0.80 +0.8 381,890 - B158DRAFT_0376 0.81 -1.3 381,890 - B158DRAFT_0376 0.81 +2.0 381,927 + B158DRAFT_0376 0.86 +0.6 381,955 - +1.4 381,962 - +1.2 381,968 - -0.9 381,970 + +0.5 381,978 - -0.7 381,983 - +5.2 381,983 - +5.8 382,103 - -0.1 382,169 + -0.4 382,169 + -0.3 382,169 + -1.3 382,177 - -1.2 382,177 - -1.8 382,177 - -1.9 382,177 - +1.4 382,177 - +0.1 382,202 + +0.1 382,215 + -0.4 382,215 + +0.1 382,223 - +2.3 382,223 - +4.0 382,223 - +4.3 382,227 + +0.2 382,228 + -1.2 382,228 + -2.9 382,236 - +4.4 382,236 - +2.8 382,236 - +3.6 382,240 + +0.5 382,243 - -0.8 382,248 - -0.2 382,248 - -0.9 382,248 - +0.5 382,248 - -0.7 382,248 - -0.4 382,248 - +1.4 382,248 - -1.6 382,248 - -0.1 382,248 - +0.2 382,264 + -1.1 382,269 + +0.5 382,269 + -1.8 382,277 - +4.8 382,277 - +4.7 382,277 - +4.8 382,277 - +4.7 382,277 - +4.8
Or see this region's nucleotide sequence