Experiment: m.b. Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2369 and B158DRAFT_2370 overlap by 1 nucleotides B158DRAFT_2370 and B158DRAFT_2371 are separated by 8 nucleotides B158DRAFT_2371 and B158DRAFT_2372 are separated by 329 nucleotides
B158DRAFT_2369: B158DRAFT_2369 - electron transport complex, RnfABCDGE type, C subunit, at 540,144 to 541,742
_2369
B158DRAFT_2370: B158DRAFT_2370 - electron transport complex, RnfABCDGE type, B subunit, at 541,742 to 542,329
_2370
B158DRAFT_2371: B158DRAFT_2371 - electron transport complex, RnfABCDGE type, A subunit, at 542,338 to 542,919
_2371
B158DRAFT_2372: B158DRAFT_2372 - Transposase and inactivated derivatives, at 543,249 to 543,785
_2372
Position (kb) 542
543 Strain fitness (log2 ratio) -2
-1
0
1 at 541.746 kb on - strand at 541.857 kb on - strand, within B158DRAFT_2370 at 542.343 kb on - strand at 543.074 kb on - strand at 543.095 kb on + strand at 543.103 kb on - strand at 543.103 kb on - strand at 543.134 kb on + strand at 543.144 kb on + strand at 543.152 kb on - strand at 543.166 kb on + strand at 543.169 kb on - strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.171 kb on + strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.179 kb on - strand at 543.265 kb on + strand at 543.265 kb on + strand at 543.266 kb on + strand at 543.266 kb on + strand at 543.266 kb on + strand at 543.266 kb on + strand at 543.266 kb on + strand at 543.274 kb on - strand at 543.274 kb on - strand at 543.274 kb on - strand at 543.274 kb on - strand at 543.274 kb on - strand at 543.274 kb on - strand at 543.321 kb on + strand, within B158DRAFT_2372 at 543.413 kb on + strand, within B158DRAFT_2372 at 543.421 kb on - strand, within B158DRAFT_2372 at 543.501 kb on - strand, within B158DRAFT_2372 at 543.501 kb on - strand, within B158DRAFT_2372 at 543.503 kb on + strand, within B158DRAFT_2372 at 543.503 kb on + strand, within B158DRAFT_2372 at 543.503 kb on + strand, within B158DRAFT_2372 at 543.503 kb on + strand, within B158DRAFT_2372 at 543.506 kb on - strand, within B158DRAFT_2372 at 543.506 kb on - strand, within B158DRAFT_2372 at 543.510 kb on + strand, within B158DRAFT_2372 at 543.511 kb on - strand, within B158DRAFT_2372 at 543.536 kb on + strand, within B158DRAFT_2372 at 543.536 kb on + strand, within B158DRAFT_2372 at 543.644 kb on + strand, within B158DRAFT_2372 at 543.644 kb on + strand, within B158DRAFT_2372 at 543.652 kb on - strand, within B158DRAFT_2372 at 543.659 kb on - strand, within B158DRAFT_2372 at 543.662 kb on - strand, within B158DRAFT_2372 at 543.665 kb on + strand, within B158DRAFT_2372 at 543.665 kb on + strand, within B158DRAFT_2372 at 543.673 kb on - strand, within B158DRAFT_2372 at 543.723 kb on + strand, within B158DRAFT_2372 at 543.730 kb on + strand, within B158DRAFT_2372 at 543.736 kb on - strand at 543.745 kb on - strand at 543.747 kb on + strand at 543.755 kb on - strand at 543.895 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 5 vol% remove 541,746 - -1.8 541,857 - B158DRAFT_2370 0.20 -1.3 542,343 - -1.9 543,074 - +0.3 543,095 + -1.6 543,103 - -0.7 543,103 - +0.6 543,134 + -0.8 543,144 + +0.8 543,152 - -0.1 543,166 + -0.2 543,169 - -0.2 543,171 + -0.8 543,171 + -0.5 543,171 + +0.4 543,171 + -0.8 543,171 + -2.1 543,171 + -1.8 543,171 + -0.9 543,171 + -0.5 543,171 + -0.9 543,171 + -0.9 543,171 + -0.6 543,171 + +0.8 543,171 + -1.2 543,171 + +0.5 543,171 + -0.6 543,171 + +0.7 543,171 + -1.0 543,171 + -0.1 543,171 + -0.8 543,171 + -1.0 543,171 + -1.3 543,171 + +0.3 543,171 + -0.5 543,171 + -0.5 543,171 + -1.4 543,171 + +1.4 543,171 + +0.0 543,179 - -0.4 543,179 - +0.2 543,179 - -1.5 543,179 - -0.7 543,179 - +0.0 543,179 - -0.5 543,179 - -0.9 543,179 - +0.1 543,179 - -1.3 543,179 - -1.0 543,179 - -0.7 543,179 - -1.0 543,179 - -0.4 543,179 - +0.3 543,179 - -0.3 543,179 - -0.4 543,179 - -0.2 543,179 - -1.4 543,179 - -0.6 543,179 - -1.1 543,179 - -1.7 543,179 - -1.4 543,179 - -1.0 543,265 + +0.7 543,265 + +0.4 543,266 + -0.3 543,266 + -1.7 543,266 + -0.3 543,266 + -0.7 543,266 + +0.7 543,274 - +0.2 543,274 - -0.3 543,274 - -0.6 543,274 - +0.6 543,274 - -1.0 543,274 - -0.4 543,321 + B158DRAFT_2372 0.13 +0.0 543,413 + B158DRAFT_2372 0.31 -0.9 543,421 - B158DRAFT_2372 0.32 +0.9 543,501 - B158DRAFT_2372 0.47 +0.4 543,501 - B158DRAFT_2372 0.47 +0.1 543,503 + B158DRAFT_2372 0.47 +0.3 543,503 + B158DRAFT_2372 0.47 +0.1 543,503 + B158DRAFT_2372 0.47 -0.5 543,503 + B158DRAFT_2372 0.47 -0.8 543,506 - B158DRAFT_2372 0.48 +0.0 543,506 - B158DRAFT_2372 0.48 -1.8 543,510 + B158DRAFT_2372 0.49 -1.8 543,511 - B158DRAFT_2372 0.49 -1.5 543,536 + B158DRAFT_2372 0.53 -1.2 543,536 + B158DRAFT_2372 0.53 -0.1 543,644 + B158DRAFT_2372 0.74 -0.9 543,644 + B158DRAFT_2372 0.74 -1.3 543,652 - B158DRAFT_2372 0.75 -0.7 543,659 - B158DRAFT_2372 0.76 +0.9 543,662 - B158DRAFT_2372 0.77 -0.0 543,665 + B158DRAFT_2372 0.77 +0.1 543,665 + B158DRAFT_2372 0.77 +0.1 543,673 - B158DRAFT_2372 0.79 -0.4 543,723 + B158DRAFT_2372 0.88 -0.8 543,730 + B158DRAFT_2372 0.90 -0.4 543,736 - -0.7 543,745 - -1.0 543,747 + -2.0 543,755 - -0.3 543,895 - +0.2
Or see this region's nucleotide sequence