Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1992

Experiment: m.b. Dimethyl Sulfoxide 5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1990 and B158DRAFT_1991 are separated by 29 nucleotidesB158DRAFT_1991 and B158DRAFT_1992 overlap by 4 nucleotidesB158DRAFT_1992 and B158DRAFT_1993 overlap by 11 nucleotidesB158DRAFT_1993 and B158DRAFT_1994 are separated by 12 nucleotides B158DRAFT_1990: B158DRAFT_1990 - 23S rRNA Gm-2251 2'-O-methyltransferase (EC 2.1.1.185), at 126,882 to 127,622 _1990 B158DRAFT_1991: B158DRAFT_1991 - hypothetical protein, at 127,652 to 128,329 _1991 B158DRAFT_1992: B158DRAFT_1992 - biotin-dependent carboxylase uncharacterized domain, at 128,326 to 129,255 _1992 B158DRAFT_1993: B158DRAFT_1993 - TIGR00370 family protein, at 129,245 to 129,943 _1993 B158DRAFT_1994: B158DRAFT_1994 - Uncharacterized proteins, homologs of lactam utilization protein B, at 129,956 to 130,714 _1994 Position (kb) 128 129 130Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 127.343 kb on - strand, within B158DRAFT_1990at 127.488 kb on + strand, within B158DRAFT_1990at 127.489 kb on - strand, within B158DRAFT_1990at 127.496 kb on - strand, within B158DRAFT_1990at 127.588 kb on + strandat 127.901 kb on - strand, within B158DRAFT_1991at 128.166 kb on + strand, within B158DRAFT_1991at 128.174 kb on - strand, within B158DRAFT_1991at 128.203 kb on + strand, within B158DRAFT_1991at 128.423 kb on + strand, within B158DRAFT_1992at 128.456 kb on + strand, within B158DRAFT_1992at 128.456 kb on + strand, within B158DRAFT_1992at 128.456 kb on + strand, within B158DRAFT_1992at 128.464 kb on - strand, within B158DRAFT_1992at 128.748 kb on - strand, within B158DRAFT_1992at 128.794 kb on + strand, within B158DRAFT_1992at 128.950 kb on + strand, within B158DRAFT_1992at 128.958 kb on - strand, within B158DRAFT_1992at 129.047 kb on + strand, within B158DRAFT_1992at 129.047 kb on + strand, within B158DRAFT_1992at 129.047 kb on + strand, within B158DRAFT_1992at 129.047 kb on + strand, within B158DRAFT_1992at 129.055 kb on - strand, within B158DRAFT_1992at 129.055 kb on - strand, within B158DRAFT_1992at 129.055 kb on - strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.106 kb on + strand, within B158DRAFT_1992at 129.114 kb on - strand, within B158DRAFT_1992at 129.114 kb on - strand, within B158DRAFT_1992at 129.114 kb on - strand, within B158DRAFT_1992at 129.114 kb on - strand, within B158DRAFT_1992at 129.114 kb on - strand, within B158DRAFT_1992at 129.153 kb on + strand, within B158DRAFT_1992at 129.186 kb on + strandat 129.194 kb on - strandat 129.220 kb on + strandat 129.283 kb on + strandat 129.293 kb on + strandat 129.372 kb on - strand, within B158DRAFT_1993at 129.394 kb on + strand, within B158DRAFT_1993at 129.481 kb on + strand, within B158DRAFT_1993at 129.486 kb on + strand, within B158DRAFT_1993at 129.489 kb on - strand, within B158DRAFT_1993at 129.502 kb on + strand, within B158DRAFT_1993at 129.555 kb on + strand, within B158DRAFT_1993at 129.560 kb on + strand, within B158DRAFT_1993at 129.560 kb on + strand, within B158DRAFT_1993at 129.563 kb on - strand, within B158DRAFT_1993at 129.577 kb on - strand, within B158DRAFT_1993at 129.577 kb on - strand, within B158DRAFT_1993at 129.599 kb on - strand, within B158DRAFT_1993at 129.619 kb on - strand, within B158DRAFT_1993at 129.898 kb on + strandat 130.054 kb on + strand, within B158DRAFT_1994at 130.190 kb on - strand, within B158DRAFT_1994at 130.211 kb on + strand, within B158DRAFT_1994

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 5 vol%
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127,343 - B158DRAFT_1990 0.62 -0.2
127,488 + B158DRAFT_1990 0.82 -0.1
127,489 - B158DRAFT_1990 0.82 -1.1
127,496 - B158DRAFT_1990 0.83 -0.7
127,588 + -1.4
127,901 - B158DRAFT_1991 0.37 -1.2
128,166 + B158DRAFT_1991 0.76 +0.1
128,174 - B158DRAFT_1991 0.77 -0.7
128,203 + B158DRAFT_1991 0.81 -0.0
128,423 + B158DRAFT_1992 0.10 +1.7
128,456 + B158DRAFT_1992 0.14 -0.3
128,456 + B158DRAFT_1992 0.14 +0.0
128,456 + B158DRAFT_1992 0.14 -0.3
128,464 - B158DRAFT_1992 0.15 -3.3
128,748 - B158DRAFT_1992 0.45 +1.0
128,794 + B158DRAFT_1992 0.50 -1.5
128,950 + B158DRAFT_1992 0.67 -0.6
128,958 - B158DRAFT_1992 0.68 -1.0
129,047 + B158DRAFT_1992 0.78 +0.5
129,047 + B158DRAFT_1992 0.78 -0.7
129,047 + B158DRAFT_1992 0.78 -0.0
129,047 + B158DRAFT_1992 0.78 +0.7
129,055 - B158DRAFT_1992 0.78 -0.4
129,055 - B158DRAFT_1992 0.78 +0.3
129,055 - B158DRAFT_1992 0.78 -0.3
129,106 + B158DRAFT_1992 0.84 -0.1
129,106 + B158DRAFT_1992 0.84 -0.2
129,106 + B158DRAFT_1992 0.84 +0.3
129,106 + B158DRAFT_1992 0.84 -2.2
129,106 + B158DRAFT_1992 0.84 -1.0
129,106 + B158DRAFT_1992 0.84 +2.1
129,106 + B158DRAFT_1992 0.84 -0.4
129,106 + B158DRAFT_1992 0.84 +0.8
129,106 + B158DRAFT_1992 0.84 -1.7
129,114 - B158DRAFT_1992 0.85 -1.5
129,114 - B158DRAFT_1992 0.85 -0.9
129,114 - B158DRAFT_1992 0.85 -0.8
129,114 - B158DRAFT_1992 0.85 -2.3
129,114 - B158DRAFT_1992 0.85 -0.9
129,153 + B158DRAFT_1992 0.89 +0.4
129,186 + +0.3
129,194 - -2.9
129,220 + -1.1
129,283 + +0.9
129,293 + -0.2
129,372 - B158DRAFT_1993 0.18 +1.2
129,394 + B158DRAFT_1993 0.21 -1.3
129,481 + B158DRAFT_1993 0.34 +0.2
129,486 + B158DRAFT_1993 0.34 +0.1
129,489 - B158DRAFT_1993 0.35 -2.2
129,502 + B158DRAFT_1993 0.37 +0.3
129,555 + B158DRAFT_1993 0.44 -0.4
129,560 + B158DRAFT_1993 0.45 -0.3
129,560 + B158DRAFT_1993 0.45 -0.4
129,563 - B158DRAFT_1993 0.45 -0.2
129,577 - B158DRAFT_1993 0.47 -0.9
129,577 - B158DRAFT_1993 0.47 +0.5
129,599 - B158DRAFT_1993 0.51 -0.4
129,619 - B158DRAFT_1993 0.54 -0.9
129,898 + +0.2
130,054 + B158DRAFT_1994 0.13 -1.4
130,190 - B158DRAFT_1994 0.31 -0.5
130,211 + B158DRAFT_1994 0.34 +0.7

Or see this region's nucleotide sequence