Experiment: m.b. Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1710 and B158DRAFT_1711 are separated by 33 nucleotides B158DRAFT_1711 and B158DRAFT_1712 are separated by 78 nucleotides B158DRAFT_1712 and B158DRAFT_1713 are separated by 13 nucleotides B158DRAFT_1713 and B158DRAFT_1714 are separated by 27 nucleotides
B158DRAFT_1710: B158DRAFT_1710 - Uncharacterized membrane protein, at 1,786,207 to 1,786,662
_1710
B158DRAFT_1711: B158DRAFT_1711 - Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2, at 1,786,696 to 1,787,442
_1711
B158DRAFT_1712: B158DRAFT_1712 - hypothetical protein, at 1,787,521 to 1,788,528
_1712
B158DRAFT_1713: B158DRAFT_1713 - hypothetical protein, at 1,788,542 to 1,789,270
_1713
B158DRAFT_1714: B158DRAFT_1714 - hypothetical protein, at 1,789,298 to 1,789,897
_1714
Position (kb)
1787
1788
1789 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1786.540 kb on + strand, within B158DRAFT_1710 at 1786.540 kb on + strand, within B158DRAFT_1710 at 1786.572 kb on - strand, within B158DRAFT_1710 at 1786.631 kb on - strand at 1786.656 kb on - strand at 1786.674 kb on + strand at 1786.703 kb on + strand at 1786.703 kb on + strand at 1786.782 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.784 kb on + strand, within B158DRAFT_1711 at 1786.792 kb on - strand, within B158DRAFT_1711 at 1786.792 kb on - strand, within B158DRAFT_1711 at 1786.792 kb on - strand, within B158DRAFT_1711 at 1786.792 kb on - strand, within B158DRAFT_1711 at 1786.792 kb on - strand, within B158DRAFT_1711 at 1786.794 kb on + strand, within B158DRAFT_1711 at 1786.802 kb on - strand, within B158DRAFT_1711 at 1786.863 kb on + strand, within B158DRAFT_1711 at 1786.875 kb on + strand, within B158DRAFT_1711 at 1786.930 kb on - strand, within B158DRAFT_1711 at 1786.985 kb on - strand, within B158DRAFT_1711 at 1786.994 kb on + strand, within B158DRAFT_1711 at 1786.997 kb on - strand, within B158DRAFT_1711 at 1787.003 kb on - strand, within B158DRAFT_1711 at 1787.046 kb on + strand, within B158DRAFT_1711 at 1787.046 kb on + strand, within B158DRAFT_1711 at 1787.054 kb on - strand, within B158DRAFT_1711 at 1787.054 kb on - strand, within B158DRAFT_1711 at 1787.054 kb on - strand, within B158DRAFT_1711 at 1787.114 kb on + strand, within B158DRAFT_1711 at 1787.114 kb on + strand, within B158DRAFT_1711 at 1787.122 kb on - strand, within B158DRAFT_1711 at 1787.122 kb on - strand, within B158DRAFT_1711 at 1787.122 kb on - strand, within B158DRAFT_1711 at 1787.122 kb on - strand, within B158DRAFT_1711 at 1787.131 kb on + strand, within B158DRAFT_1711 at 1787.185 kb on - strand, within B158DRAFT_1711 at 1787.213 kb on + strand, within B158DRAFT_1711 at 1787.221 kb on - strand, within B158DRAFT_1711 at 1787.381 kb on - strand at 1787.401 kb on - strand at 1787.417 kb on + strand at 1787.417 kb on + strand at 1787.443 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.462 kb on + strand at 1787.470 kb on - strand at 1787.470 kb on - strand at 1787.470 kb on - strand at 1787.470 kb on - strand at 1787.470 kb on - strand at 1787.470 kb on - strand at 1787.470 kb on - strand at 1787.489 kb on + strand at 1787.510 kb on + strand at 1787.511 kb on + strand at 1787.512 kb on + strand at 1787.512 kb on + strand at 1787.512 kb on + strand at 1787.512 kb on + strand at 1787.512 kb on + strand at 1787.520 kb on - strand at 1787.520 kb on - strand at 1787.520 kb on - strand at 1787.523 kb on + strand at 1787.531 kb on - strand at 1787.531 kb on - strand at 1787.580 kb on - strand at 1787.600 kb on + strand at 1787.765 kb on + strand, within B158DRAFT_1712 at 1787.773 kb on - strand, within B158DRAFT_1712 at 1787.819 kb on + strand, within B158DRAFT_1712 at 1787.912 kb on + strand, within B158DRAFT_1712 at 1787.912 kb on - strand, within B158DRAFT_1712 at 1788.000 kb on + strand, within B158DRAFT_1712 at 1788.001 kb on + strand, within B158DRAFT_1712 at 1788.001 kb on + strand, within B158DRAFT_1712 at 1788.087 kb on - strand, within B158DRAFT_1712 at 1788.143 kb on - strand, within B158DRAFT_1712 at 1788.153 kb on + strand, within B158DRAFT_1712 at 1788.246 kb on + strand, within B158DRAFT_1712 at 1788.305 kb on + strand, within B158DRAFT_1712 at 1788.311 kb on - strand, within B158DRAFT_1712 at 1788.311 kb on - strand, within B158DRAFT_1712 at 1788.381 kb on - strand, within B158DRAFT_1712 at 1788.439 kb on + strand at 1788.450 kb on + strand at 1788.458 kb on - strand at 1788.503 kb on - strand at 1788.504 kb on + strand at 1788.512 kb on - strand at 1788.512 kb on - strand at 1788.640 kb on - strand, within B158DRAFT_1713 at 1788.676 kb on + strand, within B158DRAFT_1713 at 1788.698 kb on - strand, within B158DRAFT_1713 at 1788.731 kb on - strand, within B158DRAFT_1713 at 1788.740 kb on + strand, within B158DRAFT_1713 at 1788.741 kb on - strand, within B158DRAFT_1713 at 1788.763 kb on - strand, within B158DRAFT_1713 at 1788.976 kb on + strand, within B158DRAFT_1713 at 1788.994 kb on - strand, within B158DRAFT_1713 at 1789.026 kb on - strand, within B158DRAFT_1713 at 1789.100 kb on + strand, within B158DRAFT_1713 at 1789.110 kb on + strand, within B158DRAFT_1713 at 1789.110 kb on + strand, within B158DRAFT_1713 at 1789.110 kb on + strand, within B158DRAFT_1713 at 1789.118 kb on - strand, within B158DRAFT_1713 at 1789.262 kb on - strand at 1789.276 kb on - strand at 1789.320 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 5 vol% remove 1,786,540 + B158DRAFT_1710 0.73 +1.0 1,786,540 + B158DRAFT_1710 0.73 -0.2 1,786,572 - B158DRAFT_1710 0.80 -0.4 1,786,631 - -0.4 1,786,656 - +0.5 1,786,674 + -0.4 1,786,703 + +1.2 1,786,703 + +1.3 1,786,782 + B158DRAFT_1711 0.12 +1.6 1,786,784 + B158DRAFT_1711 0.12 +2.1 1,786,784 + B158DRAFT_1711 0.12 +0.7 1,786,784 + B158DRAFT_1711 0.12 +0.8 1,786,784 + B158DRAFT_1711 0.12 +2.6 1,786,784 + B158DRAFT_1711 0.12 +1.3 1,786,784 + B158DRAFT_1711 0.12 +2.1 1,786,784 + B158DRAFT_1711 0.12 +0.1 1,786,784 + B158DRAFT_1711 0.12 +1.0 1,786,784 + B158DRAFT_1711 0.12 +1.3 1,786,792 - B158DRAFT_1711 0.13 +0.1 1,786,792 - B158DRAFT_1711 0.13 +1.5 1,786,792 - B158DRAFT_1711 0.13 +1.0 1,786,792 - B158DRAFT_1711 0.13 +1.5 1,786,792 - B158DRAFT_1711 0.13 +2.2 1,786,794 + B158DRAFT_1711 0.13 +1.1 1,786,802 - B158DRAFT_1711 0.14 +2.5 1,786,863 + B158DRAFT_1711 0.22 +1.3 1,786,875 + B158DRAFT_1711 0.24 +1.5 1,786,930 - B158DRAFT_1711 0.31 +2.5 1,786,985 - B158DRAFT_1711 0.39 +2.3 1,786,994 + B158DRAFT_1711 0.40 +0.4 1,786,997 - B158DRAFT_1711 0.40 +1.7 1,787,003 - B158DRAFT_1711 0.41 +1.2 1,787,046 + B158DRAFT_1711 0.47 +2.3 1,787,046 + B158DRAFT_1711 0.47 +2.3 1,787,054 - B158DRAFT_1711 0.48 +1.8 1,787,054 - B158DRAFT_1711 0.48 +1.7 1,787,054 - B158DRAFT_1711 0.48 +1.9 1,787,114 + B158DRAFT_1711 0.56 +0.9 1,787,114 + B158DRAFT_1711 0.56 +1.4 1,787,122 - B158DRAFT_1711 0.57 +1.8 1,787,122 - B158DRAFT_1711 0.57 +1.7 1,787,122 - B158DRAFT_1711 0.57 +1.4 1,787,122 - B158DRAFT_1711 0.57 +1.2 1,787,131 + B158DRAFT_1711 0.58 +0.9 1,787,185 - B158DRAFT_1711 0.65 +2.4 1,787,213 + B158DRAFT_1711 0.69 +0.5 1,787,221 - B158DRAFT_1711 0.70 +0.9 1,787,381 - +2.4 1,787,401 - +1.4 1,787,417 + +1.5 1,787,417 + +1.2 1,787,443 + -2.3 1,787,462 + -0.0 1,787,462 + -0.3 1,787,462 + +1.8 1,787,462 + +0.7 1,787,462 + -0.4 1,787,462 + -1.2 1,787,462 + +0.4 1,787,462 + -0.6 1,787,462 + +0.7 1,787,462 + +0.0 1,787,470 - -0.5 1,787,470 - -0.0 1,787,470 - +1.1 1,787,470 - -2.5 1,787,470 - -0.1 1,787,470 - +0.1 1,787,470 - -0.6 1,787,489 + +0.6 1,787,510 + -0.2 1,787,511 + +0.1 1,787,512 + -1.0 1,787,512 + -0.5 1,787,512 + +0.3 1,787,512 + -0.5 1,787,512 + -0.8 1,787,520 - -0.3 1,787,520 - -0.9 1,787,520 - -0.3 1,787,523 + -0.2 1,787,531 - -0.0 1,787,531 - -1.3 1,787,580 - +0.7 1,787,600 + +0.4 1,787,765 + B158DRAFT_1712 0.24 -0.7 1,787,773 - B158DRAFT_1712 0.25 +0.1 1,787,819 + B158DRAFT_1712 0.30 -0.5 1,787,912 + B158DRAFT_1712 0.39 -0.9 1,787,912 - B158DRAFT_1712 0.39 -0.2 1,788,000 + B158DRAFT_1712 0.48 -0.1 1,788,001 + B158DRAFT_1712 0.48 +1.3 1,788,001 + B158DRAFT_1712 0.48 -3.2 1,788,087 - B158DRAFT_1712 0.56 -2.8 1,788,143 - B158DRAFT_1712 0.62 -1.9 1,788,153 + B158DRAFT_1712 0.63 -1.9 1,788,246 + B158DRAFT_1712 0.72 +0.9 1,788,305 + B158DRAFT_1712 0.78 -2.9 1,788,311 - B158DRAFT_1712 0.78 -0.4 1,788,311 - B158DRAFT_1712 0.78 +0.1 1,788,381 - B158DRAFT_1712 0.85 -0.6 1,788,439 + +0.2 1,788,450 + -0.9 1,788,458 - -0.3 1,788,503 - +0.5 1,788,504 + -0.4 1,788,512 - -0.4 1,788,512 - -0.7 1,788,640 - B158DRAFT_1713 0.13 -1.1 1,788,676 + B158DRAFT_1713 0.18 -0.1 1,788,698 - B158DRAFT_1713 0.21 -0.5 1,788,731 - B158DRAFT_1713 0.26 -2.8 1,788,740 + B158DRAFT_1713 0.27 -0.7 1,788,741 - B158DRAFT_1713 0.27 -0.7 1,788,763 - B158DRAFT_1713 0.30 +0.1 1,788,976 + B158DRAFT_1713 0.60 -0.7 1,788,994 - B158DRAFT_1713 0.62 -0.4 1,789,026 - B158DRAFT_1713 0.66 -0.7 1,789,100 + B158DRAFT_1713 0.77 -0.2 1,789,110 + B158DRAFT_1713 0.78 -1.1 1,789,110 + B158DRAFT_1713 0.78 -0.5 1,789,110 + B158DRAFT_1713 0.78 -0.4 1,789,118 - B158DRAFT_1713 0.79 +0.4 1,789,262 - +0.4 1,789,276 - -0.4 1,789,320 + +0.9
Or see this region's nucleotide sequence