Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1469

Experiment: m.b. Dimethyl Sulfoxide 5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1468 and B158DRAFT_1469 are separated by 344 nucleotidesB158DRAFT_1469 and B158DRAFT_1470 are separated by 97 nucleotides B158DRAFT_1468: B158DRAFT_1468 - Predicted transcriptional regulators, at 1,518,626 to 1,519,354 _1468 B158DRAFT_1469: B158DRAFT_1469 - hypothetical protein, at 1,519,699 to 1,520,340 _1469 B158DRAFT_1470: B158DRAFT_1470 - glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41), at 1,520,438 to 1,521,724 _1470 Position (kb) 1519 1520 1521Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1518.707 kb on + strand, within B158DRAFT_1468at 1518.727 kb on - strand, within B158DRAFT_1468at 1518.800 kb on - strand, within B158DRAFT_1468at 1518.805 kb on - strand, within B158DRAFT_1468at 1518.817 kb on - strand, within B158DRAFT_1468at 1518.818 kb on + strand, within B158DRAFT_1468at 1518.871 kb on + strand, within B158DRAFT_1468at 1518.886 kb on - strand, within B158DRAFT_1468at 1518.889 kb on + strand, within B158DRAFT_1468at 1518.950 kb on + strand, within B158DRAFT_1468at 1518.950 kb on + strand, within B158DRAFT_1468at 1518.958 kb on - strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.037 kb on + strand, within B158DRAFT_1468at 1519.045 kb on - strand, within B158DRAFT_1468at 1519.045 kb on - strand, within B158DRAFT_1468at 1519.157 kb on + strand, within B158DRAFT_1468at 1519.157 kb on + strand, within B158DRAFT_1468at 1519.157 kb on + strand, within B158DRAFT_1468at 1519.157 kb on + strand, within B158DRAFT_1468at 1519.165 kb on - strand, within B158DRAFT_1468at 1519.185 kb on - strand, within B158DRAFT_1468at 1519.197 kb on + strand, within B158DRAFT_1468at 1519.198 kb on - strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.200 kb on + strand, within B158DRAFT_1468at 1519.208 kb on - strand, within B158DRAFT_1468at 1519.208 kb on - strand, within B158DRAFT_1468at 1519.208 kb on - strand, within B158DRAFT_1468at 1519.208 kb on - strand, within B158DRAFT_1468at 1519.208 kb on - strand, within B158DRAFT_1468at 1519.268 kb on - strand, within B158DRAFT_1468at 1519.268 kb on - strand, within B158DRAFT_1468at 1519.270 kb on + strand, within B158DRAFT_1468at 1519.270 kb on + strand, within B158DRAFT_1468at 1519.270 kb on + strand, within B158DRAFT_1468at 1519.273 kb on - strand, within B158DRAFT_1468at 1519.278 kb on - strand, within B158DRAFT_1468at 1519.278 kb on - strand, within B158DRAFT_1468at 1519.278 kb on - strand, within B158DRAFT_1468at 1519.311 kb on - strandat 1519.356 kb on - strandat 1519.499 kb on - strandat 1519.533 kb on - strandat 1519.534 kb on + strandat 1519.534 kb on + strandat 1519.534 kb on + strandat 1519.535 kb on + strandat 1519.542 kb on - strandat 1519.543 kb on - strandat 1519.581 kb on + strandat 1519.591 kb on + strandat 1519.594 kb on - strandat 1519.609 kb on - strandat 1519.735 kb on + strandat 1519.743 kb on + strandat 1519.743 kb on + strandat 1519.743 kb on - strandat 1519.743 kb on - strandat 1519.885 kb on - strand, within B158DRAFT_1469at 1519.934 kb on + strand, within B158DRAFT_1469at 1519.979 kb on - strand, within B158DRAFT_1469at 1520.108 kb on + strand, within B158DRAFT_1469at 1520.116 kb on - strand, within B158DRAFT_1469at 1520.166 kb on + strand, within B158DRAFT_1469at 1520.387 kb on + strandat 1520.388 kb on + strandat 1520.388 kb on + strandat 1520.396 kb on - strandat 1520.401 kb on - strandat 1520.456 kb on + strandat 1520.456 kb on + strandat 1520.456 kb on + strandat 1520.456 kb on + strandat 1520.456 kb on + strandat 1520.456 kb on + strandat 1520.458 kb on - strandat 1520.464 kb on - strandat 1520.464 kb on - strandat 1520.464 kb on - strandat 1520.464 kb on - strandat 1520.490 kb on + strandat 1520.502 kb on - strandat 1520.509 kb on + strandat 1520.516 kb on + strandat 1520.517 kb on - strandat 1520.668 kb on + strand, within B158DRAFT_1470at 1520.668 kb on + strand, within B158DRAFT_1470at 1520.668 kb on + strand, within B158DRAFT_1470at 1520.676 kb on - strand, within B158DRAFT_1470at 1520.677 kb on + strand, within B158DRAFT_1470at 1520.677 kb on + strand, within B158DRAFT_1470at 1520.677 kb on + strand, within B158DRAFT_1470at 1520.677 kb on + strand, within B158DRAFT_1470at 1520.677 kb on + strand, within B158DRAFT_1470at 1520.677 kb on + strand, within B158DRAFT_1470at 1520.685 kb on - strand, within B158DRAFT_1470at 1520.685 kb on - strand, within B158DRAFT_1470at 1520.685 kb on - strand, within B158DRAFT_1470at 1520.685 kb on - strand, within B158DRAFT_1470at 1520.685 kb on - strand, within B158DRAFT_1470at 1520.685 kb on - strand, within B158DRAFT_1470at 1520.685 kb on - strand, within B158DRAFT_1470at 1520.685 kb on - strand, within B158DRAFT_1470at 1520.731 kb on + strand, within B158DRAFT_1470at 1520.731 kb on + strand, within B158DRAFT_1470at 1520.731 kb on + strand, within B158DRAFT_1470at 1520.778 kb on + strand, within B158DRAFT_1470at 1520.781 kb on - strand, within B158DRAFT_1470at 1520.783 kb on + strand, within B158DRAFT_1470at 1520.791 kb on - strand, within B158DRAFT_1470at 1520.793 kb on + strand, within B158DRAFT_1470at 1520.794 kb on - strand, within B158DRAFT_1470at 1520.798 kb on + strand, within B158DRAFT_1470at 1520.806 kb on - strand, within B158DRAFT_1470at 1520.826 kb on + strand, within B158DRAFT_1470at 1520.826 kb on + strand, within B158DRAFT_1470at 1520.834 kb on - strand, within B158DRAFT_1470at 1520.834 kb on - strand, within B158DRAFT_1470at 1520.834 kb on - strand, within B158DRAFT_1470at 1520.887 kb on - strand, within B158DRAFT_1470at 1520.945 kb on - strand, within B158DRAFT_1470at 1520.971 kb on - strand, within B158DRAFT_1470at 1521.005 kb on - strand, within B158DRAFT_1470at 1521.015 kb on + strand, within B158DRAFT_1470at 1521.015 kb on + strand, within B158DRAFT_1470at 1521.015 kb on + strand, within B158DRAFT_1470at 1521.015 kb on + strand, within B158DRAFT_1470at 1521.015 kb on + strand, within B158DRAFT_1470at 1521.015 kb on + strand, within B158DRAFT_1470at 1521.023 kb on - strand, within B158DRAFT_1470at 1521.023 kb on - strand, within B158DRAFT_1470at 1521.023 kb on - strand, within B158DRAFT_1470at 1521.023 kb on - strand, within B158DRAFT_1470at 1521.023 kb on - strand, within B158DRAFT_1470at 1521.023 kb on - strand, within B158DRAFT_1470at 1521.023 kb on - strand, within B158DRAFT_1470at 1521.023 kb on - strand, within B158DRAFT_1470at 1521.023 kb on - strand, within B158DRAFT_1470at 1521.023 kb on - strand, within B158DRAFT_1470at 1521.023 kb on - strand, within B158DRAFT_1470at 1521.060 kb on + strand, within B158DRAFT_1470at 1521.073 kb on - strand, within B158DRAFT_1470at 1521.105 kb on - strand, within B158DRAFT_1470at 1521.105 kb on - strand, within B158DRAFT_1470at 1521.105 kb on - strand, within B158DRAFT_1470at 1521.136 kb on + strand, within B158DRAFT_1470at 1521.144 kb on - strand, within B158DRAFT_1470at 1521.154 kb on + strand, within B158DRAFT_1470at 1521.154 kb on + strand, within B158DRAFT_1470at 1521.162 kb on - strand, within B158DRAFT_1470at 1521.162 kb on - strand, within B158DRAFT_1470at 1521.162 kb on - strand, within B158DRAFT_1470at 1521.162 kb on - strand, within B158DRAFT_1470at 1521.162 kb on - strand, within B158DRAFT_1470at 1521.186 kb on + strand, within B158DRAFT_1470at 1521.189 kb on - strand, within B158DRAFT_1470at 1521.196 kb on - strand, within B158DRAFT_1470at 1521.212 kb on - strand, within B158DRAFT_1470at 1521.217 kb on - strand, within B158DRAFT_1470at 1521.305 kb on - strand, within B158DRAFT_1470at 1521.332 kb on + strand, within B158DRAFT_1470

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 5 vol%
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1,518,707 + B158DRAFT_1468 0.11 -0.6
1,518,727 - B158DRAFT_1468 0.14 -0.7
1,518,800 - B158DRAFT_1468 0.24 -0.6
1,518,805 - B158DRAFT_1468 0.25 +0.1
1,518,817 - B158DRAFT_1468 0.26 +0.1
1,518,818 + B158DRAFT_1468 0.26 +0.5
1,518,871 + B158DRAFT_1468 0.34 -1.2
1,518,886 - B158DRAFT_1468 0.36 +0.5
1,518,889 + B158DRAFT_1468 0.36 -0.8
1,518,950 + B158DRAFT_1468 0.44 -1.6
1,518,950 + B158DRAFT_1468 0.44 -0.2
1,518,958 - B158DRAFT_1468 0.46 +1.4
1,519,037 + B158DRAFT_1468 0.56 -0.8
1,519,037 + B158DRAFT_1468 0.56 +0.6
1,519,037 + B158DRAFT_1468 0.56 +0.1
1,519,037 + B158DRAFT_1468 0.56 -0.4
1,519,037 + B158DRAFT_1468 0.56 -0.4
1,519,037 + B158DRAFT_1468 0.56 +0.2
1,519,045 - B158DRAFT_1468 0.57 -1.9
1,519,045 - B158DRAFT_1468 0.57 -0.2
1,519,157 + B158DRAFT_1468 0.73 -0.6
1,519,157 + B158DRAFT_1468 0.73 -0.6
1,519,157 + B158DRAFT_1468 0.73 -1.2
1,519,157 + B158DRAFT_1468 0.73 -0.5
1,519,165 - B158DRAFT_1468 0.74 +0.1
1,519,185 - B158DRAFT_1468 0.77 -1.9
1,519,197 + B158DRAFT_1468 0.78 +0.7
1,519,198 - B158DRAFT_1468 0.78 -1.7
1,519,200 + B158DRAFT_1468 0.79 +0.0
1,519,200 + B158DRAFT_1468 0.79 +0.0
1,519,200 + B158DRAFT_1468 0.79 -0.6
1,519,200 + B158DRAFT_1468 0.79 +0.3
1,519,200 + B158DRAFT_1468 0.79 -1.1
1,519,200 + B158DRAFT_1468 0.79 +0.1
1,519,200 + B158DRAFT_1468 0.79 -1.2
1,519,200 + B158DRAFT_1468 0.79 -0.4
1,519,200 + B158DRAFT_1468 0.79 -0.2
1,519,200 + B158DRAFT_1468 0.79 -0.2
1,519,208 - B158DRAFT_1468 0.80 -0.5
1,519,208 - B158DRAFT_1468 0.80 -1.6
1,519,208 - B158DRAFT_1468 0.80 +0.3
1,519,208 - B158DRAFT_1468 0.80 +0.6
1,519,208 - B158DRAFT_1468 0.80 +0.4
1,519,268 - B158DRAFT_1468 0.88 +1.0
1,519,268 - B158DRAFT_1468 0.88 -0.2
1,519,270 + B158DRAFT_1468 0.88 +2.2
1,519,270 + B158DRAFT_1468 0.88 +0.9
1,519,270 + B158DRAFT_1468 0.88 -1.6
1,519,273 - B158DRAFT_1468 0.89 -0.7
1,519,278 - B158DRAFT_1468 0.89 -0.1
1,519,278 - B158DRAFT_1468 0.89 +0.1
1,519,278 - B158DRAFT_1468 0.89 -0.2
1,519,311 - -0.2
1,519,356 - +0.0
1,519,499 - -1.1
1,519,533 - -0.3
1,519,534 + -0.7
1,519,534 + -0.4
1,519,534 + -0.6
1,519,535 + +0.8
1,519,542 - -1.0
1,519,543 - +0.4
1,519,581 + -0.3
1,519,591 + -1.0
1,519,594 - +0.6
1,519,609 - +0.7
1,519,735 + -0.1
1,519,743 + +0.3
1,519,743 + -0.3
1,519,743 - -0.2
1,519,743 - +0.8
1,519,885 - B158DRAFT_1469 0.29 -0.3
1,519,934 + B158DRAFT_1469 0.37 -1.9
1,519,979 - B158DRAFT_1469 0.44 -1.3
1,520,108 + B158DRAFT_1469 0.64 -0.6
1,520,116 - B158DRAFT_1469 0.65 -1.2
1,520,166 + B158DRAFT_1469 0.73 -0.5
1,520,387 + -0.8
1,520,388 + -1.0
1,520,388 + +0.4
1,520,396 - +1.3
1,520,401 - +0.1
1,520,456 + -2.3
1,520,456 + +0.3
1,520,456 + +0.2
1,520,456 + +0.7
1,520,456 + +1.0
1,520,456 + -0.5
1,520,458 - -0.3
1,520,464 - -0.6
1,520,464 - -1.8
1,520,464 - +0.6
1,520,464 - -3.0
1,520,490 + -0.7
1,520,502 - -1.5
1,520,509 + -2.3
1,520,516 + -1.0
1,520,517 - +0.4
1,520,668 + B158DRAFT_1470 0.18 +0.0
1,520,668 + B158DRAFT_1470 0.18 +0.1
1,520,668 + B158DRAFT_1470 0.18 -1.2
1,520,676 - B158DRAFT_1470 0.18 +0.1
1,520,677 + B158DRAFT_1470 0.19 -0.4
1,520,677 + B158DRAFT_1470 0.19 +0.2
1,520,677 + B158DRAFT_1470 0.19 +0.1
1,520,677 + B158DRAFT_1470 0.19 +0.3
1,520,677 + B158DRAFT_1470 0.19 -0.1
1,520,677 + B158DRAFT_1470 0.19 -0.7
1,520,685 - B158DRAFT_1470 0.19 +0.4
1,520,685 - B158DRAFT_1470 0.19 -1.6
1,520,685 - B158DRAFT_1470 0.19 +0.7
1,520,685 - B158DRAFT_1470 0.19 -1.2
1,520,685 - B158DRAFT_1470 0.19 -0.7
1,520,685 - B158DRAFT_1470 0.19 -1.0
1,520,685 - B158DRAFT_1470 0.19 -0.6
1,520,685 - B158DRAFT_1470 0.19 -0.5
1,520,731 + B158DRAFT_1470 0.23 -0.0
1,520,731 + B158DRAFT_1470 0.23 +0.1
1,520,731 + B158DRAFT_1470 0.23 +1.2
1,520,778 + B158DRAFT_1470 0.26 +0.1
1,520,781 - B158DRAFT_1470 0.27 -0.5
1,520,783 + B158DRAFT_1470 0.27 -0.3
1,520,791 - B158DRAFT_1470 0.27 -0.2
1,520,793 + B158DRAFT_1470 0.28 -0.7
1,520,794 - B158DRAFT_1470 0.28 -0.5
1,520,798 + B158DRAFT_1470 0.28 -0.6
1,520,806 - B158DRAFT_1470 0.29 -1.3
1,520,826 + B158DRAFT_1470 0.30 -0.5
1,520,826 + B158DRAFT_1470 0.30 -0.3
1,520,834 - B158DRAFT_1470 0.31 -1.6
1,520,834 - B158DRAFT_1470 0.31 -0.3
1,520,834 - B158DRAFT_1470 0.31 +0.1
1,520,887 - B158DRAFT_1470 0.35 -0.4
1,520,945 - B158DRAFT_1470 0.39 -1.0
1,520,971 - B158DRAFT_1470 0.41 +0.2
1,521,005 - B158DRAFT_1470 0.44 -0.8
1,521,015 + B158DRAFT_1470 0.45 -0.9
1,521,015 + B158DRAFT_1470 0.45 -1.2
1,521,015 + B158DRAFT_1470 0.45 -2.3
1,521,015 + B158DRAFT_1470 0.45 +0.5
1,521,015 + B158DRAFT_1470 0.45 +0.4
1,521,015 + B158DRAFT_1470 0.45 -0.1
1,521,023 - B158DRAFT_1470 0.45 -0.7
1,521,023 - B158DRAFT_1470 0.45 -0.5
1,521,023 - B158DRAFT_1470 0.45 +1.1
1,521,023 - B158DRAFT_1470 0.45 -0.7
1,521,023 - B158DRAFT_1470 0.45 -0.2
1,521,023 - B158DRAFT_1470 0.45 -1.0
1,521,023 - B158DRAFT_1470 0.45 -0.2
1,521,023 - B158DRAFT_1470 0.45 -0.4
1,521,023 - B158DRAFT_1470 0.45 -1.7
1,521,023 - B158DRAFT_1470 0.45 -1.6
1,521,023 - B158DRAFT_1470 0.45 -0.5
1,521,060 + B158DRAFT_1470 0.48 -0.9
1,521,073 - B158DRAFT_1470 0.49 +0.3
1,521,105 - B158DRAFT_1470 0.52 -0.9
1,521,105 - B158DRAFT_1470 0.52 -0.2
1,521,105 - B158DRAFT_1470 0.52 -1.5
1,521,136 + B158DRAFT_1470 0.54 +0.7
1,521,144 - B158DRAFT_1470 0.55 -0.6
1,521,154 + B158DRAFT_1470 0.56 -1.3
1,521,154 + B158DRAFT_1470 0.56 +0.2
1,521,162 - B158DRAFT_1470 0.56 +0.6
1,521,162 - B158DRAFT_1470 0.56 -0.6
1,521,162 - B158DRAFT_1470 0.56 -0.5
1,521,162 - B158DRAFT_1470 0.56 -1.8
1,521,162 - B158DRAFT_1470 0.56 -0.5
1,521,186 + B158DRAFT_1470 0.58 -1.0
1,521,189 - B158DRAFT_1470 0.58 -1.1
1,521,196 - B158DRAFT_1470 0.59 -0.4
1,521,212 - B158DRAFT_1470 0.60 -3.6
1,521,217 - B158DRAFT_1470 0.61 -0.5
1,521,305 - B158DRAFT_1470 0.67 -1.4
1,521,332 + B158DRAFT_1470 0.69 -0.3

Or see this region's nucleotide sequence