Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1443

Experiment: m.b. Dimethyl Sulfoxide 5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1441 and B158DRAFT_1442 are separated by 130 nucleotidesB158DRAFT_1442 and B158DRAFT_1443 are separated by 175 nucleotidesB158DRAFT_1443 and B158DRAFT_1444 are separated by 48 nucleotides B158DRAFT_1441: B158DRAFT_1441 - Uracil-DNA glycosylase (EC 3.2.2.-), at 1,493,951 to 1,494,616 _1441 B158DRAFT_1442: B158DRAFT_1442 - hypothetical protein, at 1,494,747 to 1,495,046 _1442 B158DRAFT_1443: B158DRAFT_1443 - hypothetical protein, at 1,495,222 to 1,496,439 _1443 B158DRAFT_1444: B158DRAFT_1444 - Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains), at 1,496,488 to 1,498,425 _1444 Position (kb) 1495 1496 1497Strain fitness (log2 ratio) -2 -1 0 1 2at 1494.236 kb on + strand, within B158DRAFT_1441at 1494.258 kb on + strand, within B158DRAFT_1441at 1494.266 kb on - strand, within B158DRAFT_1441at 1494.266 kb on - strand, within B158DRAFT_1441at 1494.268 kb on + strand, within B158DRAFT_1441at 1494.285 kb on - strand, within B158DRAFT_1441at 1494.333 kb on + strand, within B158DRAFT_1441at 1494.351 kb on + strand, within B158DRAFT_1441at 1494.357 kb on - strand, within B158DRAFT_1441at 1494.375 kb on - strand, within B158DRAFT_1441at 1494.403 kb on + strand, within B158DRAFT_1441at 1494.411 kb on - strand, within B158DRAFT_1441at 1494.441 kb on + strand, within B158DRAFT_1441at 1494.441 kb on + strand, within B158DRAFT_1441at 1494.441 kb on + strand, within B158DRAFT_1441at 1494.441 kb on + strand, within B158DRAFT_1441at 1494.441 kb on + strand, within B158DRAFT_1441at 1494.441 kb on + strand, within B158DRAFT_1441at 1494.441 kb on + strand, within B158DRAFT_1441at 1494.441 kb on + strand, within B158DRAFT_1441at 1494.449 kb on - strand, within B158DRAFT_1441at 1494.449 kb on - strand, within B158DRAFT_1441at 1494.449 kb on - strand, within B158DRAFT_1441at 1494.586 kb on + strandat 1494.592 kb on - strandat 1494.686 kb on - strandat 1494.686 kb on - strandat 1494.799 kb on + strand, within B158DRAFT_1442at 1494.812 kb on - strand, within B158DRAFT_1442at 1494.857 kb on - strand, within B158DRAFT_1442at 1494.906 kb on - strand, within B158DRAFT_1442at 1494.941 kb on - strand, within B158DRAFT_1442at 1494.959 kb on - strand, within B158DRAFT_1442at 1494.990 kb on + strand, within B158DRAFT_1442at 1494.990 kb on + strand, within B158DRAFT_1442at 1494.990 kb on + strand, within B158DRAFT_1442at 1494.995 kb on + strand, within B158DRAFT_1442at 1494.996 kb on - strand, within B158DRAFT_1442at 1494.998 kb on - strand, within B158DRAFT_1442at 1495.003 kb on - strand, within B158DRAFT_1442at 1495.003 kb on - strand, within B158DRAFT_1442at 1495.004 kb on + strand, within B158DRAFT_1442at 1495.080 kb on + strandat 1495.083 kb on - strandat 1495.083 kb on - strandat 1495.085 kb on + strandat 1495.236 kb on - strandat 1495.343 kb on + strandat 1495.351 kb on - strand, within B158DRAFT_1443at 1495.351 kb on - strand, within B158DRAFT_1443at 1495.369 kb on + strand, within B158DRAFT_1443at 1495.392 kb on + strand, within B158DRAFT_1443at 1495.413 kb on + strand, within B158DRAFT_1443at 1495.415 kb on + strand, within B158DRAFT_1443at 1495.415 kb on + strand, within B158DRAFT_1443at 1495.423 kb on - strand, within B158DRAFT_1443at 1495.423 kb on - strand, within B158DRAFT_1443at 1495.504 kb on - strand, within B158DRAFT_1443at 1495.513 kb on - strand, within B158DRAFT_1443at 1495.540 kb on - strand, within B158DRAFT_1443at 1495.569 kb on - strand, within B158DRAFT_1443at 1495.587 kb on + strand, within B158DRAFT_1443at 1495.595 kb on - strand, within B158DRAFT_1443at 1495.637 kb on - strand, within B158DRAFT_1443at 1495.656 kb on + strand, within B158DRAFT_1443at 1495.656 kb on + strand, within B158DRAFT_1443at 1495.656 kb on + strand, within B158DRAFT_1443at 1495.741 kb on + strand, within B158DRAFT_1443at 1495.744 kb on + strand, within B158DRAFT_1443at 1495.749 kb on - strand, within B158DRAFT_1443at 1495.823 kb on - strand, within B158DRAFT_1443at 1495.823 kb on - strand, within B158DRAFT_1443at 1495.824 kb on + strand, within B158DRAFT_1443at 1495.841 kb on + strand, within B158DRAFT_1443at 1495.850 kb on + strand, within B158DRAFT_1443at 1495.850 kb on + strand, within B158DRAFT_1443at 1495.895 kb on + strand, within B158DRAFT_1443at 1495.912 kb on + strand, within B158DRAFT_1443at 1495.912 kb on + strand, within B158DRAFT_1443at 1495.920 kb on - strand, within B158DRAFT_1443at 1495.922 kb on + strand, within B158DRAFT_1443at 1495.922 kb on + strand, within B158DRAFT_1443at 1495.930 kb on - strand, within B158DRAFT_1443at 1495.930 kb on - strand, within B158DRAFT_1443at 1495.930 kb on - strand, within B158DRAFT_1443at 1495.930 kb on - strand, within B158DRAFT_1443at 1495.930 kb on - strand, within B158DRAFT_1443at 1495.952 kb on + strand, within B158DRAFT_1443at 1495.960 kb on - strand, within B158DRAFT_1443at 1495.969 kb on + strand, within B158DRAFT_1443at 1495.969 kb on + strand, within B158DRAFT_1443at 1495.969 kb on + strand, within B158DRAFT_1443at 1495.969 kb on + strand, within B158DRAFT_1443at 1495.977 kb on - strand, within B158DRAFT_1443at 1495.977 kb on - strand, within B158DRAFT_1443at 1495.977 kb on - strand, within B158DRAFT_1443at 1495.977 kb on - strand, within B158DRAFT_1443at 1495.977 kb on - strand, within B158DRAFT_1443at 1495.977 kb on - strand, within B158DRAFT_1443at 1496.073 kb on + strand, within B158DRAFT_1443at 1496.086 kb on - strand, within B158DRAFT_1443at 1496.107 kb on - strand, within B158DRAFT_1443at 1496.109 kb on + strand, within B158DRAFT_1443at 1496.147 kb on - strand, within B158DRAFT_1443at 1496.193 kb on + strand, within B158DRAFT_1443at 1496.196 kb on + strand, within B158DRAFT_1443at 1496.295 kb on - strand, within B158DRAFT_1443at 1496.295 kb on - strand, within B158DRAFT_1443at 1496.337 kb on + strandat 1496.342 kb on + strandat 1496.342 kb on + strandat 1496.343 kb on - strandat 1496.350 kb on - strandat 1496.350 kb on - strandat 1496.350 kb on - strandat 1496.541 kb on + strandat 1496.549 kb on - strandat 1496.562 kb on + strandat 1496.562 kb on + strandat 1496.573 kb on + strandat 1496.580 kb on - strandat 1496.581 kb on - strandat 1496.648 kb on - strandat 1496.664 kb on + strandat 1496.709 kb on - strand, within B158DRAFT_1444at 1496.709 kb on - strand, within B158DRAFT_1444at 1496.787 kb on + strand, within B158DRAFT_1444at 1496.787 kb on + strand, within B158DRAFT_1444at 1496.795 kb on - strand, within B158DRAFT_1444at 1496.795 kb on - strand, within B158DRAFT_1444at 1496.795 kb on - strand, within B158DRAFT_1444at 1496.830 kb on + strand, within B158DRAFT_1444at 1496.830 kb on + strand, within B158DRAFT_1444at 1496.848 kb on - strand, within B158DRAFT_1444at 1496.862 kb on + strand, within B158DRAFT_1444at 1496.896 kb on - strand, within B158DRAFT_1444at 1496.896 kb on - strand, within B158DRAFT_1444at 1496.906 kb on + strand, within B158DRAFT_1444at 1496.906 kb on - strand, within B158DRAFT_1444at 1496.908 kb on + strand, within B158DRAFT_1444at 1496.925 kb on + strand, within B158DRAFT_1444at 1497.004 kb on - strand, within B158DRAFT_1444at 1497.022 kb on - strand, within B158DRAFT_1444at 1497.022 kb on - strand, within B158DRAFT_1444at 1497.037 kb on + strand, within B158DRAFT_1444at 1497.037 kb on + strand, within B158DRAFT_1444at 1497.037 kb on + strand, within B158DRAFT_1444at 1497.037 kb on + strand, within B158DRAFT_1444at 1497.037 kb on + strand, within B158DRAFT_1444at 1497.038 kb on - strand, within B158DRAFT_1444at 1497.045 kb on - strand, within B158DRAFT_1444at 1497.045 kb on - strand, within B158DRAFT_1444at 1497.045 kb on - strand, within B158DRAFT_1444at 1497.059 kb on - strand, within B158DRAFT_1444at 1497.059 kb on - strand, within B158DRAFT_1444at 1497.147 kb on + strand, within B158DRAFT_1444at 1497.159 kb on + strand, within B158DRAFT_1444at 1497.164 kb on + strand, within B158DRAFT_1444at 1497.184 kb on - strand, within B158DRAFT_1444at 1497.184 kb on - strand, within B158DRAFT_1444at 1497.184 kb on - strand, within B158DRAFT_1444at 1497.202 kb on + strand, within B158DRAFT_1444at 1497.210 kb on - strand, within B158DRAFT_1444at 1497.222 kb on - strand, within B158DRAFT_1444at 1497.222 kb on - strand, within B158DRAFT_1444at 1497.235 kb on + strand, within B158DRAFT_1444at 1497.243 kb on - strand, within B158DRAFT_1444

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 5 vol%
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1,494,236 + B158DRAFT_1441 0.43 -1.4
1,494,258 + B158DRAFT_1441 0.46 -0.3
1,494,266 - B158DRAFT_1441 0.47 +0.0
1,494,266 - B158DRAFT_1441 0.47 -1.3
1,494,268 + B158DRAFT_1441 0.48 +0.6
1,494,285 - B158DRAFT_1441 0.50 -0.1
1,494,333 + B158DRAFT_1441 0.57 -0.4
1,494,351 + B158DRAFT_1441 0.60 -1.2
1,494,357 - B158DRAFT_1441 0.61 -0.8
1,494,375 - B158DRAFT_1441 0.64 +0.2
1,494,403 + B158DRAFT_1441 0.68 -2.4
1,494,411 - B158DRAFT_1441 0.69 +0.2
1,494,441 + B158DRAFT_1441 0.74 -0.2
1,494,441 + B158DRAFT_1441 0.74 -1.6
1,494,441 + B158DRAFT_1441 0.74 +0.3
1,494,441 + B158DRAFT_1441 0.74 -0.9
1,494,441 + B158DRAFT_1441 0.74 +0.2
1,494,441 + B158DRAFT_1441 0.74 -1.5
1,494,441 + B158DRAFT_1441 0.74 -0.5
1,494,441 + B158DRAFT_1441 0.74 +1.2
1,494,449 - B158DRAFT_1441 0.75 -1.5
1,494,449 - B158DRAFT_1441 0.75 -0.5
1,494,449 - B158DRAFT_1441 0.75 +0.0
1,494,586 + -0.7
1,494,592 - +1.2
1,494,686 - -0.3
1,494,686 - -0.7
1,494,799 + B158DRAFT_1442 0.17 +0.5
1,494,812 - B158DRAFT_1442 0.22 +1.0
1,494,857 - B158DRAFT_1442 0.37 -0.1
1,494,906 - B158DRAFT_1442 0.53 -1.5
1,494,941 - B158DRAFT_1442 0.65 +1.0
1,494,959 - B158DRAFT_1442 0.71 -0.7
1,494,990 + B158DRAFT_1442 0.81 +1.1
1,494,990 + B158DRAFT_1442 0.81 -0.3
1,494,990 + B158DRAFT_1442 0.81 +0.3
1,494,995 + B158DRAFT_1442 0.83 -0.4
1,494,996 - B158DRAFT_1442 0.83 +0.7
1,494,998 - B158DRAFT_1442 0.84 -0.7
1,495,003 - B158DRAFT_1442 0.85 -1.6
1,495,003 - B158DRAFT_1442 0.85 -0.2
1,495,004 + B158DRAFT_1442 0.86 -0.2
1,495,080 + -0.4
1,495,083 - -0.1
1,495,083 - -0.5
1,495,085 + -0.9
1,495,236 - +1.4
1,495,343 + -0.3
1,495,351 - B158DRAFT_1443 0.11 -0.9
1,495,351 - B158DRAFT_1443 0.11 -0.9
1,495,369 + B158DRAFT_1443 0.12 +0.5
1,495,392 + B158DRAFT_1443 0.14 -0.4
1,495,413 + B158DRAFT_1443 0.16 -0.9
1,495,415 + B158DRAFT_1443 0.16 +0.9
1,495,415 + B158DRAFT_1443 0.16 -1.2
1,495,423 - B158DRAFT_1443 0.17 -0.3
1,495,423 - B158DRAFT_1443 0.17 +0.0
1,495,504 - B158DRAFT_1443 0.23 -0.3
1,495,513 - B158DRAFT_1443 0.24 -0.9
1,495,540 - B158DRAFT_1443 0.26 +1.2
1,495,569 - B158DRAFT_1443 0.28 +0.2
1,495,587 + B158DRAFT_1443 0.30 +0.1
1,495,595 - B158DRAFT_1443 0.31 -0.4
1,495,637 - B158DRAFT_1443 0.34 -1.4
1,495,656 + B158DRAFT_1443 0.36 -1.4
1,495,656 + B158DRAFT_1443 0.36 +0.6
1,495,656 + B158DRAFT_1443 0.36 -0.4
1,495,741 + B158DRAFT_1443 0.43 -0.4
1,495,744 + B158DRAFT_1443 0.43 -2.0
1,495,749 - B158DRAFT_1443 0.43 -1.3
1,495,823 - B158DRAFT_1443 0.49 +1.2
1,495,823 - B158DRAFT_1443 0.49 -1.4
1,495,824 + B158DRAFT_1443 0.49 -0.1
1,495,841 + B158DRAFT_1443 0.51 -0.9
1,495,850 + B158DRAFT_1443 0.52 -0.1
1,495,850 + B158DRAFT_1443 0.52 -1.5
1,495,895 + B158DRAFT_1443 0.55 +0.3
1,495,912 + B158DRAFT_1443 0.57 -0.0
1,495,912 + B158DRAFT_1443 0.57 -0.0
1,495,920 - B158DRAFT_1443 0.57 +0.4
1,495,922 + B158DRAFT_1443 0.57 -2.6
1,495,922 + B158DRAFT_1443 0.57 -0.8
1,495,930 - B158DRAFT_1443 0.58 +0.7
1,495,930 - B158DRAFT_1443 0.58 -1.8
1,495,930 - B158DRAFT_1443 0.58 +0.1
1,495,930 - B158DRAFT_1443 0.58 -0.6
1,495,930 - B158DRAFT_1443 0.58 -2.6
1,495,952 + B158DRAFT_1443 0.60 -1.7
1,495,960 - B158DRAFT_1443 0.61 -0.6
1,495,969 + B158DRAFT_1443 0.61 +0.5
1,495,969 + B158DRAFT_1443 0.61 -0.3
1,495,969 + B158DRAFT_1443 0.61 -0.1
1,495,969 + B158DRAFT_1443 0.61 -1.0
1,495,977 - B158DRAFT_1443 0.62 +1.2
1,495,977 - B158DRAFT_1443 0.62 -1.7
1,495,977 - B158DRAFT_1443 0.62 -1.0
1,495,977 - B158DRAFT_1443 0.62 -0.2
1,495,977 - B158DRAFT_1443 0.62 -0.8
1,495,977 - B158DRAFT_1443 0.62 -2.3
1,496,073 + B158DRAFT_1443 0.70 -1.6
1,496,086 - B158DRAFT_1443 0.71 -0.2
1,496,107 - B158DRAFT_1443 0.73 +0.2
1,496,109 + B158DRAFT_1443 0.73 -0.7
1,496,147 - B158DRAFT_1443 0.76 -0.5
1,496,193 + B158DRAFT_1443 0.80 -0.5
1,496,196 + B158DRAFT_1443 0.80 -0.6
1,496,295 - B158DRAFT_1443 0.88 -0.2
1,496,295 - B158DRAFT_1443 0.88 -0.9
1,496,337 + +0.3
1,496,342 + -0.7
1,496,342 + -1.7
1,496,343 - -0.4
1,496,350 - -1.8
1,496,350 - +1.2
1,496,350 - -0.6
1,496,541 + +2.1
1,496,549 - +0.0
1,496,562 + +0.3
1,496,562 + -0.6
1,496,573 + -0.5
1,496,580 - -1.5
1,496,581 - +0.1
1,496,648 - +0.2
1,496,664 + -0.2
1,496,709 - B158DRAFT_1444 0.11 -0.5
1,496,709 - B158DRAFT_1444 0.11 -0.4
1,496,787 + B158DRAFT_1444 0.15 +0.2
1,496,787 + B158DRAFT_1444 0.15 +0.2
1,496,795 - B158DRAFT_1444 0.16 -0.4
1,496,795 - B158DRAFT_1444 0.16 -0.4
1,496,795 - B158DRAFT_1444 0.16 -0.4
1,496,830 + B158DRAFT_1444 0.18 -1.5
1,496,830 + B158DRAFT_1444 0.18 -1.8
1,496,848 - B158DRAFT_1444 0.19 +0.3
1,496,862 + B158DRAFT_1444 0.19 +0.3
1,496,896 - B158DRAFT_1444 0.21 +0.6
1,496,896 - B158DRAFT_1444 0.21 -0.4
1,496,906 + B158DRAFT_1444 0.22 +0.4
1,496,906 - B158DRAFT_1444 0.22 +0.2
1,496,908 + B158DRAFT_1444 0.22 -0.2
1,496,925 + B158DRAFT_1444 0.23 -0.3
1,497,004 - B158DRAFT_1444 0.27 -0.4
1,497,022 - B158DRAFT_1444 0.28 -1.0
1,497,022 - B158DRAFT_1444 0.28 -0.3
1,497,037 + B158DRAFT_1444 0.28 -0.7
1,497,037 + B158DRAFT_1444 0.28 -0.1
1,497,037 + B158DRAFT_1444 0.28 -0.9
1,497,037 + B158DRAFT_1444 0.28 +0.5
1,497,037 + B158DRAFT_1444 0.28 +0.3
1,497,038 - B158DRAFT_1444 0.28 -0.5
1,497,045 - B158DRAFT_1444 0.29 +0.5
1,497,045 - B158DRAFT_1444 0.29 +0.3
1,497,045 - B158DRAFT_1444 0.29 -0.6
1,497,059 - B158DRAFT_1444 0.29 +0.3
1,497,059 - B158DRAFT_1444 0.29 -0.2
1,497,147 + B158DRAFT_1444 0.34 +0.3
1,497,159 + B158DRAFT_1444 0.35 +0.2
1,497,164 + B158DRAFT_1444 0.35 +0.2
1,497,184 - B158DRAFT_1444 0.36 -0.1
1,497,184 - B158DRAFT_1444 0.36 +1.3
1,497,184 - B158DRAFT_1444 0.36 +1.3
1,497,202 + B158DRAFT_1444 0.37 +0.1
1,497,210 - B158DRAFT_1444 0.37 -0.3
1,497,222 - B158DRAFT_1444 0.38 -1.7
1,497,222 - B158DRAFT_1444 0.38 -0.9
1,497,235 + B158DRAFT_1444 0.39 -0.2
1,497,243 - B158DRAFT_1444 0.39 -0.5

Or see this region's nucleotide sequence