Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0508

Experiment: m.b. Dimethyl Sulfoxide 5 vol%

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0507 and B158DRAFT_0508 overlap by 4 nucleotidesB158DRAFT_0508 and B158DRAFT_0509 are separated by 172 nucleotides B158DRAFT_0507: B158DRAFT_0507 - Highly conserved protein containing a thioredoxin domain, at 509,962 to 512,034 _0507 B158DRAFT_0508: B158DRAFT_0508 - Uncharacterized protein involved in an early stage of isoprenoid biosynthesis, at 512,031 to 512,690 _0508 B158DRAFT_0509: B158DRAFT_0509 - diguanylate cyclase (GGDEF) domain, at 512,863 to 517,413 _0509 Position (kb) 512 513Strain fitness (log2 ratio) -2 -1 0 1 2at 511.036 kb on - strand, within B158DRAFT_0507at 511.096 kb on + strand, within B158DRAFT_0507at 511.105 kb on + strand, within B158DRAFT_0507at 511.207 kb on + strand, within B158DRAFT_0507at 511.208 kb on - strand, within B158DRAFT_0507at 511.287 kb on + strand, within B158DRAFT_0507at 511.287 kb on + strand, within B158DRAFT_0507at 511.287 kb on + strand, within B158DRAFT_0507at 511.287 kb on + strand, within B158DRAFT_0507at 511.287 kb on + strand, within B158DRAFT_0507at 511.290 kb on - strand, within B158DRAFT_0507at 511.290 kb on - strand, within B158DRAFT_0507at 511.290 kb on - strand, within B158DRAFT_0507at 511.295 kb on - strand, within B158DRAFT_0507at 511.295 kb on - strand, within B158DRAFT_0507at 511.295 kb on - strand, within B158DRAFT_0507at 511.295 kb on - strand, within B158DRAFT_0507at 511.295 kb on - strand, within B158DRAFT_0507at 511.295 kb on - strand, within B158DRAFT_0507at 511.295 kb on - strand, within B158DRAFT_0507at 511.332 kb on + strand, within B158DRAFT_0507at 511.332 kb on + strand, within B158DRAFT_0507at 511.332 kb on + strand, within B158DRAFT_0507at 511.332 kb on + strand, within B158DRAFT_0507at 511.332 kb on + strand, within B158DRAFT_0507at 511.332 kb on + strand, within B158DRAFT_0507at 511.332 kb on + strand, within B158DRAFT_0507at 511.332 kb on + strand, within B158DRAFT_0507at 511.340 kb on - strand, within B158DRAFT_0507at 511.340 kb on - strand, within B158DRAFT_0507at 511.340 kb on - strand, within B158DRAFT_0507at 511.391 kb on - strand, within B158DRAFT_0507at 511.401 kb on + strand, within B158DRAFT_0507at 511.513 kb on - strand, within B158DRAFT_0507at 511.513 kb on - strand, within B158DRAFT_0507at 511.513 kb on - strand, within B158DRAFT_0507at 511.630 kb on + strand, within B158DRAFT_0507at 511.630 kb on + strand, within B158DRAFT_0507at 511.630 kb on + strand, within B158DRAFT_0507at 511.640 kb on - strand, within B158DRAFT_0507at 511.720 kb on + strand, within B158DRAFT_0507at 511.720 kb on + strand, within B158DRAFT_0507at 511.720 kb on + strand, within B158DRAFT_0507at 511.725 kb on + strand, within B158DRAFT_0507at 511.725 kb on + strand, within B158DRAFT_0507at 511.728 kb on - strand, within B158DRAFT_0507at 511.728 kb on - strand, within B158DRAFT_0507at 511.728 kb on - strand, within B158DRAFT_0507at 511.728 kb on - strand, within B158DRAFT_0507at 511.728 kb on - strand, within B158DRAFT_0507at 511.728 kb on - strand, within B158DRAFT_0507at 511.728 kb on - strand, within B158DRAFT_0507at 511.728 kb on - strand, within B158DRAFT_0507at 511.728 kb on - strand, within B158DRAFT_0507at 511.730 kb on + strand, within B158DRAFT_0507at 511.730 kb on + strand, within B158DRAFT_0507at 511.730 kb on + strand, within B158DRAFT_0507at 511.733 kb on - strand, within B158DRAFT_0507at 511.733 kb on - strand, within B158DRAFT_0507at 511.738 kb on - strand, within B158DRAFT_0507at 511.738 kb on - strand, within B158DRAFT_0507at 511.738 kb on - strand, within B158DRAFT_0507at 511.738 kb on - strand, within B158DRAFT_0507at 511.738 kb on - strand, within B158DRAFT_0507at 511.738 kb on - strand, within B158DRAFT_0507at 511.744 kb on - strand, within B158DRAFT_0507at 511.756 kb on + strand, within B158DRAFT_0507at 511.756 kb on + strand, within B158DRAFT_0507at 511.756 kb on + strand, within B158DRAFT_0507at 511.764 kb on - strand, within B158DRAFT_0507at 511.774 kb on + strand, within B158DRAFT_0507at 511.839 kb on - strandat 511.912 kb on + strandat 511.912 kb on + strandat 511.942 kb on + strandat 511.942 kb on + strandat 511.942 kb on + strandat 511.988 kb on + strandat 511.988 kb on + strandat 511.988 kb on + strandat 511.996 kb on - strandat 511.996 kb on - strandat 512.001 kb on - strandat 512.011 kb on - strandat 512.035 kb on + strandat 512.094 kb on - strandat 512.109 kb on + strand, within B158DRAFT_0508at 512.109 kb on + strand, within B158DRAFT_0508at 512.109 kb on + strand, within B158DRAFT_0508at 512.119 kb on + strand, within B158DRAFT_0508at 512.127 kb on - strand, within B158DRAFT_0508at 512.172 kb on + strand, within B158DRAFT_0508at 512.172 kb on + strand, within B158DRAFT_0508at 512.172 kb on + strand, within B158DRAFT_0508at 512.172 kb on + strand, within B158DRAFT_0508at 512.180 kb on - strand, within B158DRAFT_0508at 512.180 kb on - strand, within B158DRAFT_0508at 512.180 kb on - strand, within B158DRAFT_0508at 512.180 kb on - strand, within B158DRAFT_0508at 512.195 kb on - strand, within B158DRAFT_0508at 512.256 kb on - strand, within B158DRAFT_0508at 512.256 kb on - strand, within B158DRAFT_0508at 512.258 kb on + strand, within B158DRAFT_0508at 512.258 kb on + strand, within B158DRAFT_0508at 512.266 kb on - strand, within B158DRAFT_0508at 512.266 kb on - strand, within B158DRAFT_0508at 512.266 kb on - strand, within B158DRAFT_0508at 512.266 kb on - strand, within B158DRAFT_0508at 512.266 kb on - strand, within B158DRAFT_0508at 512.276 kb on + strand, within B158DRAFT_0508at 512.276 kb on + strand, within B158DRAFT_0508at 512.281 kb on + strand, within B158DRAFT_0508at 512.281 kb on + strand, within B158DRAFT_0508at 512.284 kb on - strand, within B158DRAFT_0508at 512.284 kb on - strand, within B158DRAFT_0508at 512.284 kb on - strand, within B158DRAFT_0508at 512.284 kb on - strand, within B158DRAFT_0508at 512.420 kb on - strand, within B158DRAFT_0508at 512.459 kb on - strand, within B158DRAFT_0508at 512.488 kb on + strand, within B158DRAFT_0508at 512.515 kb on + strand, within B158DRAFT_0508at 512.523 kb on - strand, within B158DRAFT_0508at 512.553 kb on + strand, within B158DRAFT_0508at 512.565 kb on + strand, within B158DRAFT_0508at 512.594 kb on - strand, within B158DRAFT_0508at 512.600 kb on + strand, within B158DRAFT_0508at 512.644 kb on + strandat 512.654 kb on - strandat 512.665 kb on + strandat 512.709 kb on - strandat 512.721 kb on + strandat 512.800 kb on + strandat 512.808 kb on - strandat 512.834 kb on + strandat 512.834 kb on + strandat 512.846 kb on - strandat 513.074 kb on - strandat 513.166 kb on + strandat 513.166 kb on + strandat 513.166 kb on + strandat 513.184 kb on - strandat 513.184 kb on - strandat 513.184 kb on - strandat 513.184 kb on - strandat 513.192 kb on - strandat 513.230 kb on + strandat 513.230 kb on + strandat 513.230 kb on + strandat 513.230 kb on + strandat 513.230 kb on + strandat 513.230 kb on + strandat 513.230 kb on + strandat 513.230 kb on + strandat 513.230 kb on + strandat 513.230 kb on + strandat 513.230 kb on + strandat 513.238 kb on - strandat 513.238 kb on - strandat 513.238 kb on - strandat 513.238 kb on - strandat 513.280 kb on + strandat 513.347 kb on - strand, within B158DRAFT_0509at 513.377 kb on + strand, within B158DRAFT_0509at 513.426 kb on + strand, within B158DRAFT_0509at 513.426 kb on + strand, within B158DRAFT_0509at 513.426 kb on + strand, within B158DRAFT_0509at 513.426 kb on + strand, within B158DRAFT_0509at 513.426 kb on + strand, within B158DRAFT_0509at 513.434 kb on - strand, within B158DRAFT_0509at 513.434 kb on - strand, within B158DRAFT_0509at 513.434 kb on - strand, within B158DRAFT_0509at 513.445 kb on - strand, within B158DRAFT_0509at 513.462 kb on + strand, within B158DRAFT_0509at 513.602 kb on - strand, within B158DRAFT_0509at 513.632 kb on + strand, within B158DRAFT_0509at 513.642 kb on + strand, within B158DRAFT_0509at 513.661 kb on + strand, within B158DRAFT_0509at 513.669 kb on - strand, within B158DRAFT_0509at 513.669 kb on - strand, within B158DRAFT_0509at 513.669 kb on - strand, within B158DRAFT_0509

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 5 vol%
remove
511,036 - B158DRAFT_0507 0.52 +0.0
511,096 + B158DRAFT_0507 0.55 -1.9
511,105 + B158DRAFT_0507 0.55 +0.6
511,207 + B158DRAFT_0507 0.60 +0.5
511,208 - B158DRAFT_0507 0.60 -0.2
511,287 + B158DRAFT_0507 0.64 -0.4
511,287 + B158DRAFT_0507 0.64 +0.3
511,287 + B158DRAFT_0507 0.64 +1.9
511,287 + B158DRAFT_0507 0.64 -0.2
511,287 + B158DRAFT_0507 0.64 +0.0
511,290 - B158DRAFT_0507 0.64 +2.0
511,290 - B158DRAFT_0507 0.64 -0.7
511,290 - B158DRAFT_0507 0.64 +0.1
511,295 - B158DRAFT_0507 0.64 -0.2
511,295 - B158DRAFT_0507 0.64 +1.2
511,295 - B158DRAFT_0507 0.64 -0.3
511,295 - B158DRAFT_0507 0.64 -0.0
511,295 - B158DRAFT_0507 0.64 +0.3
511,295 - B158DRAFT_0507 0.64 -0.1
511,295 - B158DRAFT_0507 0.64 -1.0
511,332 + B158DRAFT_0507 0.66 +0.3
511,332 + B158DRAFT_0507 0.66 -0.0
511,332 + B158DRAFT_0507 0.66 +2.2
511,332 + B158DRAFT_0507 0.66 +0.3
511,332 + B158DRAFT_0507 0.66 +0.2
511,332 + B158DRAFT_0507 0.66 +0.3
511,332 + B158DRAFT_0507 0.66 +0.6
511,332 + B158DRAFT_0507 0.66 +0.2
511,340 - B158DRAFT_0507 0.66 -0.2
511,340 - B158DRAFT_0507 0.66 +1.0
511,340 - B158DRAFT_0507 0.66 +0.8
511,391 - B158DRAFT_0507 0.69 +0.5
511,401 + B158DRAFT_0507 0.69 +2.0
511,513 - B158DRAFT_0507 0.75 -0.0
511,513 - B158DRAFT_0507 0.75 -0.1
511,513 - B158DRAFT_0507 0.75 -1.9
511,630 + B158DRAFT_0507 0.80 -0.0
511,630 + B158DRAFT_0507 0.80 +0.6
511,630 + B158DRAFT_0507 0.80 +1.0
511,640 - B158DRAFT_0507 0.81 -2.2
511,720 + B158DRAFT_0507 0.85 +0.2
511,720 + B158DRAFT_0507 0.85 -1.2
511,720 + B158DRAFT_0507 0.85 -0.5
511,725 + B158DRAFT_0507 0.85 -0.0
511,725 + B158DRAFT_0507 0.85 +1.0
511,728 - B158DRAFT_0507 0.85 -1.9
511,728 - B158DRAFT_0507 0.85 +0.7
511,728 - B158DRAFT_0507 0.85 -2.4
511,728 - B158DRAFT_0507 0.85 -0.1
511,728 - B158DRAFT_0507 0.85 -0.5
511,728 - B158DRAFT_0507 0.85 +0.6
511,728 - B158DRAFT_0507 0.85 -1.3
511,728 - B158DRAFT_0507 0.85 +0.7
511,728 - B158DRAFT_0507 0.85 +0.6
511,730 + B158DRAFT_0507 0.85 +0.1
511,730 + B158DRAFT_0507 0.85 -0.1
511,730 + B158DRAFT_0507 0.85 +1.3
511,733 - B158DRAFT_0507 0.85 -0.1
511,733 - B158DRAFT_0507 0.85 +0.3
511,738 - B158DRAFT_0507 0.86 -0.0
511,738 - B158DRAFT_0507 0.86 -0.1
511,738 - B158DRAFT_0507 0.86 -0.1
511,738 - B158DRAFT_0507 0.86 +0.3
511,738 - B158DRAFT_0507 0.86 -0.2
511,738 - B158DRAFT_0507 0.86 +1.0
511,744 - B158DRAFT_0507 0.86 -0.6
511,756 + B158DRAFT_0507 0.87 -1.3
511,756 + B158DRAFT_0507 0.87 +0.5
511,756 + B158DRAFT_0507 0.87 +0.5
511,764 - B158DRAFT_0507 0.87 +0.4
511,774 + B158DRAFT_0507 0.87 +0.3
511,839 - -1.1
511,912 + +1.2
511,912 + +0.5
511,942 + +0.2
511,942 + -1.6
511,942 + -0.2
511,988 + +0.5
511,988 + +0.5
511,988 + -1.8
511,996 - -0.6
511,996 - -0.5
512,001 - +0.8
512,011 - +1.3
512,035 + -1.7
512,094 - -0.3
512,109 + B158DRAFT_0508 0.12 -0.4
512,109 + B158DRAFT_0508 0.12 +0.2
512,109 + B158DRAFT_0508 0.12 -1.4
512,119 + B158DRAFT_0508 0.13 +0.2
512,127 - B158DRAFT_0508 0.15 +0.6
512,172 + B158DRAFT_0508 0.21 -2.1
512,172 + B158DRAFT_0508 0.21 -0.3
512,172 + B158DRAFT_0508 0.21 +0.1
512,172 + B158DRAFT_0508 0.21 -0.0
512,180 - B158DRAFT_0508 0.23 +1.3
512,180 - B158DRAFT_0508 0.23 -0.6
512,180 - B158DRAFT_0508 0.23 +0.4
512,180 - B158DRAFT_0508 0.23 -1.1
512,195 - B158DRAFT_0508 0.25 +0.0
512,256 - B158DRAFT_0508 0.34 -1.1
512,256 - B158DRAFT_0508 0.34 +0.5
512,258 + B158DRAFT_0508 0.34 -0.9
512,258 + B158DRAFT_0508 0.34 +1.1
512,266 - B158DRAFT_0508 0.36 -0.2
512,266 - B158DRAFT_0508 0.36 -1.0
512,266 - B158DRAFT_0508 0.36 +0.1
512,266 - B158DRAFT_0508 0.36 -0.2
512,266 - B158DRAFT_0508 0.36 +1.2
512,276 + B158DRAFT_0508 0.37 +1.4
512,276 + B158DRAFT_0508 0.37 -1.8
512,281 + B158DRAFT_0508 0.38 +1.2
512,281 + B158DRAFT_0508 0.38 +0.1
512,284 - B158DRAFT_0508 0.38 -1.4
512,284 - B158DRAFT_0508 0.38 -2.1
512,284 - B158DRAFT_0508 0.38 +0.1
512,284 - B158DRAFT_0508 0.38 -0.7
512,420 - B158DRAFT_0508 0.59 -0.2
512,459 - B158DRAFT_0508 0.65 -0.3
512,488 + B158DRAFT_0508 0.69 -1.1
512,515 + B158DRAFT_0508 0.73 -1.9
512,523 - B158DRAFT_0508 0.75 +0.1
512,553 + B158DRAFT_0508 0.79 -0.3
512,565 + B158DRAFT_0508 0.81 +1.1
512,594 - B158DRAFT_0508 0.85 -0.8
512,600 + B158DRAFT_0508 0.86 +1.1
512,644 + -0.9
512,654 - +0.4
512,665 + +1.1
512,709 - +0.1
512,721 + +0.1
512,800 + -0.2
512,808 - -1.6
512,834 + +0.4
512,834 + -0.9
512,846 - +0.4
513,074 - +1.5
513,166 + -1.6
513,166 + -2.0
513,166 + +0.0
513,184 - -0.6
513,184 - -1.2
513,184 - -1.4
513,184 - -1.8
513,192 - -1.4
513,230 + -0.3
513,230 + -1.7
513,230 + -1.1
513,230 + -2.2
513,230 + -0.9
513,230 + -2.5
513,230 + -2.3
513,230 + +1.8
513,230 + -1.6
513,230 + -2.7
513,230 + -1.9
513,238 - -2.1
513,238 - -1.5
513,238 - -1.7
513,238 - -2.7
513,280 + +0.2
513,347 - B158DRAFT_0509 0.11 -2.4
513,377 + B158DRAFT_0509 0.11 +1.7
513,426 + B158DRAFT_0509 0.12 -1.9
513,426 + B158DRAFT_0509 0.12 -1.1
513,426 + B158DRAFT_0509 0.12 -0.9
513,426 + B158DRAFT_0509 0.12 -1.6
513,426 + B158DRAFT_0509 0.12 -2.2
513,434 - B158DRAFT_0509 0.13 -1.5
513,434 - B158DRAFT_0509 0.13 -1.2
513,434 - B158DRAFT_0509 0.13 -1.1
513,445 - B158DRAFT_0509 0.13 -2.5
513,462 + B158DRAFT_0509 0.13 -1.7
513,602 - B158DRAFT_0509 0.16 +0.5
513,632 + B158DRAFT_0509 0.17 -0.4
513,642 + B158DRAFT_0509 0.17 -2.4
513,661 + B158DRAFT_0509 0.18 +0.1
513,669 - B158DRAFT_0509 0.18 -2.5
513,669 - B158DRAFT_0509 0.18 -0.5
513,669 - B158DRAFT_0509 0.18 -2.0

Or see this region's nucleotide sequence