Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0138

Experiment: m.b. Dimethyl Sulfoxide 5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0137 and B158DRAFT_0138 are separated by 196 nucleotidesB158DRAFT_0138 and B158DRAFT_0139 overlap by 4 nucleotidesB158DRAFT_0139 and B158DRAFT_0140 are separated by 26 nucleotides B158DRAFT_0137: B158DRAFT_0137 - cytochrome c oxidase, subunit II, at 135,075 to 136,244 _0137 B158DRAFT_0138: B158DRAFT_0138 - hypothetical protein, at 136,441 to 137,190 _0138 B158DRAFT_0139: B158DRAFT_0139 - RNA polymerase sigma factor, sigma-70 family, at 137,187 to 137,876 _0139 B158DRAFT_0140: B158DRAFT_0140 - Uncharacterized protein containing a von Willebrand factor type A (vWA) domain, at 137,903 to 139,648 _0140 Position (kb) 136 137 138Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 135.509 kb on - strand, within B158DRAFT_0137at 135.519 kb on - strand, within B158DRAFT_0137at 135.521 kb on + strand, within B158DRAFT_0137at 135.521 kb on + strand, within B158DRAFT_0137at 135.521 kb on + strand, within B158DRAFT_0137at 135.521 kb on + strand, within B158DRAFT_0137at 135.524 kb on - strand, within B158DRAFT_0137at 135.529 kb on - strand, within B158DRAFT_0137at 135.529 kb on - strand, within B158DRAFT_0137at 135.529 kb on - strand, within B158DRAFT_0137at 135.529 kb on - strand, within B158DRAFT_0137at 135.642 kb on + strand, within B158DRAFT_0137at 135.643 kb on - strand, within B158DRAFT_0137at 135.644 kb on + strand, within B158DRAFT_0137at 135.649 kb on + strand, within B158DRAFT_0137at 135.650 kb on - strand, within B158DRAFT_0137at 135.887 kb on + strand, within B158DRAFT_0137at 135.999 kb on - strand, within B158DRAFT_0137at 136.071 kb on + strand, within B158DRAFT_0137at 136.079 kb on - strand, within B158DRAFT_0137at 136.079 kb on - strand, within B158DRAFT_0137at 136.137 kb on + strandat 136.169 kb on + strandat 136.185 kb on + strandat 136.191 kb on + strandat 136.193 kb on - strandat 136.255 kb on + strandat 136.298 kb on + strandat 136.511 kb on + strandat 136.568 kb on + strand, within B158DRAFT_0138at 136.570 kb on - strand, within B158DRAFT_0138at 136.592 kb on + strand, within B158DRAFT_0138at 136.623 kb on - strand, within B158DRAFT_0138at 136.625 kb on + strand, within B158DRAFT_0138at 136.630 kb on + strand, within B158DRAFT_0138at 136.630 kb on + strand, within B158DRAFT_0138at 136.633 kb on - strand, within B158DRAFT_0138at 136.633 kb on - strand, within B158DRAFT_0138at 136.691 kb on + strand, within B158DRAFT_0138at 136.699 kb on - strand, within B158DRAFT_0138at 136.699 kb on - strand, within B158DRAFT_0138at 136.699 kb on - strand, within B158DRAFT_0138at 136.699 kb on - strand, within B158DRAFT_0138at 136.753 kb on + strand, within B158DRAFT_0138at 136.768 kb on + strand, within B158DRAFT_0138at 136.790 kb on - strand, within B158DRAFT_0138at 136.797 kb on - strand, within B158DRAFT_0138at 136.837 kb on + strand, within B158DRAFT_0138at 136.845 kb on - strand, within B158DRAFT_0138at 136.877 kb on - strand, within B158DRAFT_0138at 136.909 kb on + strand, within B158DRAFT_0138at 137.008 kb on - strand, within B158DRAFT_0138at 137.010 kb on + strand, within B158DRAFT_0138at 137.028 kb on + strand, within B158DRAFT_0138at 137.042 kb on - strand, within B158DRAFT_0138at 137.109 kb on + strand, within B158DRAFT_0138at 137.240 kb on + strandat 137.245 kb on - strandat 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.272 kb on + strand, within B158DRAFT_0139at 137.279 kb on + strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.280 kb on - strand, within B158DRAFT_0139at 137.298 kb on + strand, within B158DRAFT_0139at 137.351 kb on - strand, within B158DRAFT_0139at 137.482 kb on + strand, within B158DRAFT_0139at 137.482 kb on + strand, within B158DRAFT_0139at 137.482 kb on + strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.490 kb on - strand, within B158DRAFT_0139at 137.550 kb on - strand, within B158DRAFT_0139at 137.567 kb on - strand, within B158DRAFT_0139at 137.567 kb on - strand, within B158DRAFT_0139at 137.578 kb on + strand, within B158DRAFT_0139at 137.596 kb on - strand, within B158DRAFT_0139at 137.690 kb on + strand, within B158DRAFT_0139at 137.711 kb on - strand, within B158DRAFT_0139at 137.726 kb on + strand, within B158DRAFT_0139at 137.743 kb on - strand, within B158DRAFT_0139at 137.772 kb on - strand, within B158DRAFT_0139at 137.800 kb on + strand, within B158DRAFT_0139at 137.800 kb on + strand, within B158DRAFT_0139at 137.800 kb on + strand, within B158DRAFT_0139at 137.808 kb on - strandat 137.808 kb on - strandat 137.808 kb on - strandat 137.810 kb on + strandat 137.905 kb on + strandat 137.910 kb on + strandat 137.910 kb on + strandat 137.910 kb on + strandat 137.918 kb on - strandat 137.923 kb on - strandat 137.923 kb on - strandat 137.931 kb on + strandat 137.939 kb on - strandat 137.942 kb on - strandat 137.942 kb on - strandat 138.009 kb on + strandat 138.009 kb on + strandat 138.017 kb on + strandat 138.017 kb on - strandat 138.025 kb on - strandat 138.035 kb on + strandat 138.069 kb on - strandat 138.069 kb on - strandat 138.094 kb on + strand, within B158DRAFT_0140at 138.102 kb on - strand, within B158DRAFT_0140at 138.102 kb on - strand, within B158DRAFT_0140at 138.123 kb on - strand, within B158DRAFT_0140at 138.141 kb on + strand, within B158DRAFT_0140at 138.168 kb on - strand, within B158DRAFT_0140

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 5 vol%
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135,509 - B158DRAFT_0137 0.37 -0.3
135,519 - B158DRAFT_0137 0.38 -3.8
135,521 + B158DRAFT_0137 0.38 +0.3
135,521 + B158DRAFT_0137 0.38 -1.8
135,521 + B158DRAFT_0137 0.38 +0.5
135,521 + B158DRAFT_0137 0.38 +1.2
135,524 - B158DRAFT_0137 0.38 -0.8
135,529 - B158DRAFT_0137 0.39 -0.1
135,529 - B158DRAFT_0137 0.39 +0.2
135,529 - B158DRAFT_0137 0.39 -0.1
135,529 - B158DRAFT_0137 0.39 -0.6
135,642 + B158DRAFT_0137 0.48 -0.8
135,643 - B158DRAFT_0137 0.49 +0.9
135,644 + B158DRAFT_0137 0.49 +1.3
135,649 + B158DRAFT_0137 0.49 +1.5
135,650 - B158DRAFT_0137 0.49 +0.9
135,887 + B158DRAFT_0137 0.69 -0.7
135,999 - B158DRAFT_0137 0.79 +0.9
136,071 + B158DRAFT_0137 0.85 +1.2
136,079 - B158DRAFT_0137 0.86 +1.8
136,079 - B158DRAFT_0137 0.86 +0.4
136,137 + +0.3
136,169 + +0.6
136,185 + +0.1
136,191 + +0.2
136,193 - +0.5
136,255 + +0.5
136,298 + +0.3
136,511 + -0.2
136,568 + B158DRAFT_0138 0.17 +3.6
136,570 - B158DRAFT_0138 0.17 +0.3
136,592 + B158DRAFT_0138 0.20 -0.1
136,623 - B158DRAFT_0138 0.24 +3.5
136,625 + B158DRAFT_0138 0.25 +0.8
136,630 + B158DRAFT_0138 0.25 -1.5
136,630 + B158DRAFT_0138 0.25 +0.1
136,633 - B158DRAFT_0138 0.26 +0.8
136,633 - B158DRAFT_0138 0.26 -1.0
136,691 + B158DRAFT_0138 0.33 +4.2
136,699 - B158DRAFT_0138 0.34 +4.1
136,699 - B158DRAFT_0138 0.34 +3.6
136,699 - B158DRAFT_0138 0.34 +3.5
136,699 - B158DRAFT_0138 0.34 +4.7
136,753 + B158DRAFT_0138 0.42 +4.8
136,768 + B158DRAFT_0138 0.44 +3.5
136,790 - B158DRAFT_0138 0.47 +2.9
136,797 - B158DRAFT_0138 0.47 +2.5
136,837 + B158DRAFT_0138 0.53 +0.1
136,845 - B158DRAFT_0138 0.54 +2.1
136,877 - B158DRAFT_0138 0.58 +2.3
136,909 + B158DRAFT_0138 0.62 +1.7
137,008 - B158DRAFT_0138 0.76 -0.2
137,010 + B158DRAFT_0138 0.76 +5.0
137,028 + B158DRAFT_0138 0.78 +3.5
137,042 - B158DRAFT_0138 0.80 +3.4
137,109 + B158DRAFT_0138 0.89 -1.2
137,240 + +0.0
137,245 - +0.3
137,272 + B158DRAFT_0139 0.12 -1.4
137,272 + B158DRAFT_0139 0.12 -0.0
137,272 + B158DRAFT_0139 0.12 -1.4
137,272 + B158DRAFT_0139 0.12 -2.0
137,272 + B158DRAFT_0139 0.12 +0.7
137,272 + B158DRAFT_0139 0.12 -0.5
137,272 + B158DRAFT_0139 0.12 -0.8
137,279 + B158DRAFT_0139 0.13 -0.3
137,280 - B158DRAFT_0139 0.13 -0.3
137,280 - B158DRAFT_0139 0.13 -0.5
137,280 - B158DRAFT_0139 0.13 +0.2
137,280 - B158DRAFT_0139 0.13 +1.2
137,280 - B158DRAFT_0139 0.13 +0.7
137,280 - B158DRAFT_0139 0.13 -0.3
137,280 - B158DRAFT_0139 0.13 -0.4
137,280 - B158DRAFT_0139 0.13 -0.0
137,280 - B158DRAFT_0139 0.13 +2.4
137,280 - B158DRAFT_0139 0.13 -0.1
137,280 - B158DRAFT_0139 0.13 -2.7
137,280 - B158DRAFT_0139 0.13 -0.7
137,280 - B158DRAFT_0139 0.13 -0.5
137,280 - B158DRAFT_0139 0.13 -2.0
137,280 - B158DRAFT_0139 0.13 -0.3
137,280 - B158DRAFT_0139 0.13 +0.2
137,298 + B158DRAFT_0139 0.16 -0.8
137,351 - B158DRAFT_0139 0.24 +0.8
137,482 + B158DRAFT_0139 0.43 +0.7
137,482 + B158DRAFT_0139 0.43 -0.7
137,482 + B158DRAFT_0139 0.43 -3.2
137,490 - B158DRAFT_0139 0.44 +1.2
137,490 - B158DRAFT_0139 0.44 +1.0
137,490 - B158DRAFT_0139 0.44 -1.9
137,490 - B158DRAFT_0139 0.44 +0.2
137,490 - B158DRAFT_0139 0.44 +0.6
137,490 - B158DRAFT_0139 0.44 -1.2
137,490 - B158DRAFT_0139 0.44 -0.3
137,490 - B158DRAFT_0139 0.44 +0.3
137,490 - B158DRAFT_0139 0.44 -0.1
137,550 - B158DRAFT_0139 0.53 -0.6
137,567 - B158DRAFT_0139 0.55 -0.8
137,567 - B158DRAFT_0139 0.55 -0.1
137,578 + B158DRAFT_0139 0.57 -0.4
137,596 - B158DRAFT_0139 0.59 -0.7
137,690 + B158DRAFT_0139 0.73 -2.8
137,711 - B158DRAFT_0139 0.76 +0.5
137,726 + B158DRAFT_0139 0.78 -0.5
137,743 - B158DRAFT_0139 0.81 +0.1
137,772 - B158DRAFT_0139 0.85 +3.1
137,800 + B158DRAFT_0139 0.89 -0.3
137,800 + B158DRAFT_0139 0.89 +2.2
137,800 + B158DRAFT_0139 0.89 +0.2
137,808 - +2.3
137,808 - -1.6
137,808 - +0.8
137,810 + +0.3
137,905 + +0.2
137,910 + +0.6
137,910 + -0.2
137,910 + +0.4
137,918 - -0.9
137,923 - +0.4
137,923 - -0.4
137,931 + -2.4
137,939 - -0.0
137,942 - -0.8
137,942 - -0.7
138,009 + -0.2
138,009 + -3.4
138,017 + +0.1
138,017 - -1.9
138,025 - -0.0
138,035 + +0.0
138,069 - -0.4
138,069 - -1.6
138,094 + B158DRAFT_0140 0.11 +0.2
138,102 - B158DRAFT_0140 0.11 +0.3
138,102 - B158DRAFT_0140 0.11 -0.1
138,123 - B158DRAFT_0140 0.13 -0.3
138,141 + B158DRAFT_0140 0.14 -2.8
138,168 - B158DRAFT_0140 0.15 +0.5

Or see this region's nucleotide sequence