Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2529

Experiment: m.b. Fusidic 0.00049 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2528 and B158DRAFT_2529 are separated by 137 nucleotidesB158DRAFT_2529 and B158DRAFT_2530 are separated by 27 nucleotidesB158DRAFT_2530 and B158DRAFT_2531 are separated by 87 nucleotides B158DRAFT_2528: B158DRAFT_2528 - His Kinase A (phospho-acceptor) domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, at 717,362 to 719,023 _2528 B158DRAFT_2529: B158DRAFT_2529 - NAD synthase, at 719,161 to 720,783 _2529 B158DRAFT_2530: B158DRAFT_2530 - nitrogen regulatory protein P-II family, at 720,811 to 721,149 _2530 B158DRAFT_2531: B158DRAFT_2531 - Beta-barrel assembly machine subunit BamD, at 721,237 to 722,043 _2531 Position (kb) 719 720 721Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 718.161 kb on - strand, within B158DRAFT_2528at 718.174 kb on + strand, within B158DRAFT_2528at 718.354 kb on + strand, within B158DRAFT_2528at 718.356 kb on - strand, within B158DRAFT_2528at 718.356 kb on - strand, within B158DRAFT_2528at 718.358 kb on + strand, within B158DRAFT_2528at 718.361 kb on - strand, within B158DRAFT_2528at 718.483 kb on - strand, within B158DRAFT_2528at 718.512 kb on + strand, within B158DRAFT_2528at 718.517 kb on + strand, within B158DRAFT_2528at 718.524 kb on + strand, within B158DRAFT_2528at 718.546 kb on + strand, within B158DRAFT_2528at 718.596 kb on + strand, within B158DRAFT_2528at 718.596 kb on + strand, within B158DRAFT_2528at 718.614 kb on + strand, within B158DRAFT_2528at 718.622 kb on - strand, within B158DRAFT_2528at 718.622 kb on - strand, within B158DRAFT_2528at 718.622 kb on - strand, within B158DRAFT_2528at 718.624 kb on + strand, within B158DRAFT_2528at 718.628 kb on - strand, within B158DRAFT_2528at 718.630 kb on + strand, within B158DRAFT_2528at 718.630 kb on + strand, within B158DRAFT_2528at 718.630 kb on + strand, within B158DRAFT_2528at 718.630 kb on + strand, within B158DRAFT_2528at 718.630 kb on + strand, within B158DRAFT_2528at 718.630 kb on + strand, within B158DRAFT_2528at 718.630 kb on + strand, within B158DRAFT_2528at 718.630 kb on + strand, within B158DRAFT_2528at 718.630 kb on + strand, within B158DRAFT_2528at 718.630 kb on + strand, within B158DRAFT_2528at 718.630 kb on + strand, within B158DRAFT_2528at 718.638 kb on - strand, within B158DRAFT_2528at 718.638 kb on - strand, within B158DRAFT_2528at 718.638 kb on - strand, within B158DRAFT_2528at 718.638 kb on - strand, within B158DRAFT_2528at 718.638 kb on - strand, within B158DRAFT_2528at 718.638 kb on - strand, within B158DRAFT_2528at 718.643 kb on - strand, within B158DRAFT_2528at 718.650 kb on - strand, within B158DRAFT_2528at 718.684 kb on - strand, within B158DRAFT_2528at 718.709 kb on + strand, within B158DRAFT_2528at 718.717 kb on + strand, within B158DRAFT_2528at 718.722 kb on - strand, within B158DRAFT_2528at 718.723 kb on + strand, within B158DRAFT_2528at 718.731 kb on - strand, within B158DRAFT_2528at 718.733 kb on + strand, within B158DRAFT_2528at 718.733 kb on + strand, within B158DRAFT_2528at 718.733 kb on + strand, within B158DRAFT_2528at 718.733 kb on + strand, within B158DRAFT_2528at 718.845 kb on - strand, within B158DRAFT_2528at 718.852 kb on + strand, within B158DRAFT_2528at 718.860 kb on - strandat 718.862 kb on + strandat 718.870 kb on - strandat 718.885 kb on - strandat 718.971 kb on - strandat 718.971 kb on - strandat 719.047 kb on + strandat 720.749 kb on + strandat 720.749 kb on + strandat 720.749 kb on + strandat 720.768 kb on + strandat 720.768 kb on + strandat 720.768 kb on + strandat 720.776 kb on - strandat 720.776 kb on - strandat 720.786 kb on - strandat 720.865 kb on + strand, within B158DRAFT_2530at 721.068 kb on - strand, within B158DRAFT_2530at 721.123 kb on + strandat 721.196 kb on - strandat 721.196 kb on - strandat 721.230 kb on - strandat 721.258 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml
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718,161 - B158DRAFT_2528 0.48 -0.9
718,174 + B158DRAFT_2528 0.49 -2.0
718,354 + B158DRAFT_2528 0.60 -1.1
718,356 - B158DRAFT_2528 0.60 -0.7
718,356 - B158DRAFT_2528 0.60 -0.2
718,358 + B158DRAFT_2528 0.60 +0.5
718,361 - B158DRAFT_2528 0.60 +0.6
718,483 - B158DRAFT_2528 0.67 -0.9
718,512 + B158DRAFT_2528 0.69 +0.6
718,517 + B158DRAFT_2528 0.69 +0.7
718,524 + B158DRAFT_2528 0.70 +0.8
718,546 + B158DRAFT_2528 0.71 +1.1
718,596 + B158DRAFT_2528 0.74 -1.3
718,596 + B158DRAFT_2528 0.74 +0.3
718,614 + B158DRAFT_2528 0.75 -0.7
718,622 - B158DRAFT_2528 0.76 +0.4
718,622 - B158DRAFT_2528 0.76 -1.0
718,622 - B158DRAFT_2528 0.76 -1.3
718,624 + B158DRAFT_2528 0.76 -1.6
718,628 - B158DRAFT_2528 0.76 -1.5
718,630 + B158DRAFT_2528 0.76 -0.7
718,630 + B158DRAFT_2528 0.76 -0.1
718,630 + B158DRAFT_2528 0.76 -1.3
718,630 + B158DRAFT_2528 0.76 -0.1
718,630 + B158DRAFT_2528 0.76 -2.1
718,630 + B158DRAFT_2528 0.76 -1.4
718,630 + B158DRAFT_2528 0.76 -0.8
718,630 + B158DRAFT_2528 0.76 -1.2
718,630 + B158DRAFT_2528 0.76 +0.0
718,630 + B158DRAFT_2528 0.76 -0.1
718,630 + B158DRAFT_2528 0.76 -0.3
718,638 - B158DRAFT_2528 0.77 -0.2
718,638 - B158DRAFT_2528 0.77 +0.5
718,638 - B158DRAFT_2528 0.77 +1.4
718,638 - B158DRAFT_2528 0.77 +1.4
718,638 - B158DRAFT_2528 0.77 -1.4
718,638 - B158DRAFT_2528 0.77 -0.4
718,643 - B158DRAFT_2528 0.77 -0.7
718,650 - B158DRAFT_2528 0.77 -0.1
718,684 - B158DRAFT_2528 0.80 -0.6
718,709 + B158DRAFT_2528 0.81 -0.2
718,717 + B158DRAFT_2528 0.82 -2.8
718,722 - B158DRAFT_2528 0.82 -0.9
718,723 + B158DRAFT_2528 0.82 -0.0
718,731 - B158DRAFT_2528 0.82 +0.6
718,733 + B158DRAFT_2528 0.82 +2.1
718,733 + B158DRAFT_2528 0.82 -1.8
718,733 + B158DRAFT_2528 0.82 +0.2
718,733 + B158DRAFT_2528 0.82 -0.1
718,845 - B158DRAFT_2528 0.89 +1.9
718,852 + B158DRAFT_2528 0.90 -1.3
718,860 - +0.5
718,862 + -0.3
718,870 - +1.6
718,885 - -0.3
718,971 - -0.5
718,971 - +0.6
719,047 + -0.5
720,749 + -0.3
720,749 + -1.2
720,749 + -0.6
720,768 + -0.7
720,768 + -2.0
720,768 + -1.6
720,776 - +1.9
720,776 - +0.3
720,786 - +0.4
720,865 + B158DRAFT_2530 0.16 +1.7
721,068 - B158DRAFT_2530 0.76 +3.3
721,123 + +1.7
721,196 - -0.2
721,196 - -0.6
721,230 - -0.1
721,258 - +2.9

Or see this region's nucleotide sequence