Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2339

Experiment: m.b. Fusidic 0.00049 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2338 and B158DRAFT_2339 are separated by 157 nucleotidesB158DRAFT_2339 and B158DRAFT_2340 are separated by 92 nucleotides B158DRAFT_2338: B158DRAFT_2338 - Universal stress protein UspA and related nucleotide-binding proteins, at 503,406 to 504,257 _2338 B158DRAFT_2339: B158DRAFT_2339 - tRNA_Asn_GTT, at 504,415 to 504,490 _2339 B158DRAFT_2340: B158DRAFT_2340 - Aspartate/tyrosine/aromatic aminotransferase, at 504,583 to 505,761 _2340 Position (kb) 504 505Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 503.439 kb on + strandat 503.496 kb on + strand, within B158DRAFT_2338at 503.496 kb on + strand, within B158DRAFT_2338at 503.496 kb on + strand, within B158DRAFT_2338at 503.496 kb on + strand, within B158DRAFT_2338at 503.496 kb on + strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.504 kb on - strand, within B158DRAFT_2338at 503.568 kb on - strand, within B158DRAFT_2338at 503.669 kb on + strand, within B158DRAFT_2338at 503.813 kb on + strand, within B158DRAFT_2338at 503.813 kb on + strand, within B158DRAFT_2338at 503.813 kb on + strand, within B158DRAFT_2338at 503.813 kb on + strand, within B158DRAFT_2338at 503.813 kb on + strand, within B158DRAFT_2338at 503.821 kb on - strand, within B158DRAFT_2338at 503.821 kb on - strand, within B158DRAFT_2338at 503.823 kb on - strand, within B158DRAFT_2338at 503.872 kb on + strand, within B158DRAFT_2338at 503.872 kb on + strand, within B158DRAFT_2338at 503.880 kb on - strand, within B158DRAFT_2338at 503.970 kb on - strand, within B158DRAFT_2338at 503.977 kb on + strand, within B158DRAFT_2338at 503.985 kb on - strand, within B158DRAFT_2338at 504.000 kb on - strand, within B158DRAFT_2338at 504.061 kb on + strand, within B158DRAFT_2338at 504.061 kb on + strand, within B158DRAFT_2338at 504.069 kb on - strand, within B158DRAFT_2338at 504.069 kb on - strand, within B158DRAFT_2338at 504.073 kb on + strand, within B158DRAFT_2338at 504.075 kb on + strand, within B158DRAFT_2338at 504.083 kb on - strand, within B158DRAFT_2338at 504.093 kb on - strand, within B158DRAFT_2338at 504.135 kb on - strand, within B158DRAFT_2338at 504.160 kb on - strand, within B158DRAFT_2338at 504.215 kb on - strandat 504.273 kb on + strandat 504.282 kb on - strandat 504.353 kb on + strandat 504.403 kb on - strandat 504.643 kb on + strandat 504.651 kb on - strandat 504.845 kb on + strand, within B158DRAFT_2340at 505.012 kb on + strand, within B158DRAFT_2340at 505.080 kb on + strand, within B158DRAFT_2340at 505.080 kb on + strand, within B158DRAFT_2340at 505.080 kb on + strand, within B158DRAFT_2340at 505.080 kb on + strand, within B158DRAFT_2340at 505.080 kb on + strand, within B158DRAFT_2340at 505.088 kb on - strand, within B158DRAFT_2340at 505.088 kb on - strand, within B158DRAFT_2340at 505.088 kb on - strand, within B158DRAFT_2340at 505.092 kb on + strand, within B158DRAFT_2340at 505.116 kb on + strand, within B158DRAFT_2340at 505.128 kb on + strand, within B158DRAFT_2340at 505.192 kb on - strand, within B158DRAFT_2340at 505.226 kb on - strand, within B158DRAFT_2340at 505.236 kb on + strand, within B158DRAFT_2340at 505.268 kb on - strand, within B158DRAFT_2340at 505.298 kb on + strand, within B158DRAFT_2340at 505.387 kb on + strand, within B158DRAFT_2340at 505.387 kb on + strand, within B158DRAFT_2340at 505.387 kb on + strand, within B158DRAFT_2340at 505.387 kb on + strand, within B158DRAFT_2340at 505.387 kb on + strand, within B158DRAFT_2340at 505.387 kb on + strand, within B158DRAFT_2340at 505.395 kb on - strand, within B158DRAFT_2340at 505.395 kb on - strand, within B158DRAFT_2340at 505.397 kb on + strand, within B158DRAFT_2340at 505.428 kb on - strand, within B158DRAFT_2340

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml
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503,439 + +0.6
503,496 + B158DRAFT_2338 0.11 -0.3
503,496 + B158DRAFT_2338 0.11 +3.8
503,496 + B158DRAFT_2338 0.11 -0.3
503,496 + B158DRAFT_2338 0.11 -0.6
503,496 + B158DRAFT_2338 0.11 +0.8
503,504 - B158DRAFT_2338 0.12 +1.9
503,504 - B158DRAFT_2338 0.12 -0.7
503,504 - B158DRAFT_2338 0.12 +0.3
503,504 - B158DRAFT_2338 0.12 +2.0
503,504 - B158DRAFT_2338 0.12 -1.0
503,504 - B158DRAFT_2338 0.12 -1.1
503,504 - B158DRAFT_2338 0.12 -1.4
503,504 - B158DRAFT_2338 0.12 -0.3
503,504 - B158DRAFT_2338 0.12 -1.0
503,504 - B158DRAFT_2338 0.12 -2.7
503,568 - B158DRAFT_2338 0.19 -0.1
503,669 + B158DRAFT_2338 0.31 +0.9
503,813 + B158DRAFT_2338 0.48 -1.3
503,813 + B158DRAFT_2338 0.48 +1.1
503,813 + B158DRAFT_2338 0.48 -0.6
503,813 + B158DRAFT_2338 0.48 +0.4
503,813 + B158DRAFT_2338 0.48 -0.4
503,821 - B158DRAFT_2338 0.49 -0.3
503,821 - B158DRAFT_2338 0.49 -0.4
503,823 - B158DRAFT_2338 0.49 -1.4
503,872 + B158DRAFT_2338 0.55 -1.0
503,872 + B158DRAFT_2338 0.55 -0.4
503,880 - B158DRAFT_2338 0.56 +2.1
503,970 - B158DRAFT_2338 0.66 +1.4
503,977 + B158DRAFT_2338 0.67 +2.1
503,985 - B158DRAFT_2338 0.68 -0.5
504,000 - B158DRAFT_2338 0.70 -0.3
504,061 + B158DRAFT_2338 0.77 -2.0
504,061 + B158DRAFT_2338 0.77 -0.6
504,069 - B158DRAFT_2338 0.78 -1.4
504,069 - B158DRAFT_2338 0.78 -1.7
504,073 + B158DRAFT_2338 0.78 -1.3
504,075 + B158DRAFT_2338 0.79 -1.3
504,083 - B158DRAFT_2338 0.79 -3.4
504,093 - B158DRAFT_2338 0.81 -1.8
504,135 - B158DRAFT_2338 0.86 -0.4
504,160 - B158DRAFT_2338 0.88 +2.2
504,215 - +0.6
504,273 + -1.0
504,282 - -0.3
504,353 + +0.7
504,403 - -0.0
504,643 + +1.9
504,651 - +1.3
504,845 + B158DRAFT_2340 0.22 +0.7
505,012 + B158DRAFT_2340 0.36 +2.4
505,080 + B158DRAFT_2340 0.42 +3.4
505,080 + B158DRAFT_2340 0.42 +2.9
505,080 + B158DRAFT_2340 0.42 +1.1
505,080 + B158DRAFT_2340 0.42 +1.3
505,080 + B158DRAFT_2340 0.42 +1.6
505,088 - B158DRAFT_2340 0.43 +2.1
505,088 - B158DRAFT_2340 0.43 +2.6
505,088 - B158DRAFT_2340 0.43 +1.3
505,092 + B158DRAFT_2340 0.43 +0.9
505,116 + B158DRAFT_2340 0.45 +1.6
505,128 + B158DRAFT_2340 0.46 +0.6
505,192 - B158DRAFT_2340 0.52 +0.4
505,226 - B158DRAFT_2340 0.55 +1.3
505,236 + B158DRAFT_2340 0.55 +2.1
505,268 - B158DRAFT_2340 0.58 -0.5
505,298 + B158DRAFT_2340 0.61 +2.9
505,387 + B158DRAFT_2340 0.68 +0.7
505,387 + B158DRAFT_2340 0.68 +0.6
505,387 + B158DRAFT_2340 0.68 +0.4
505,387 + B158DRAFT_2340 0.68 +2.4
505,387 + B158DRAFT_2340 0.68 +1.0
505,387 + B158DRAFT_2340 0.68 +0.6
505,395 - B158DRAFT_2340 0.69 +1.4
505,395 - B158DRAFT_2340 0.69 +2.4
505,397 + B158DRAFT_2340 0.69 +2.4
505,428 - B158DRAFT_2340 0.72 +4.4

Or see this region's nucleotide sequence