Experiment: m.b. Fusidic 0.00049 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1824 and B158DRAFT_1825 are separated by 164 nucleotides B158DRAFT_1825 and B158DRAFT_1826 are separated by 99 nucleotides B158DRAFT_1826 and B158DRAFT_1827 are separated by 330 nucleotides B158DRAFT_1827 and B158DRAFT_1828 overlap by 4 nucleotides
B158DRAFT_1824: B158DRAFT_1824 - Membrane proteins related to metalloendopeptidases, at 1,923,968 to 1,925,467
_1824
B158DRAFT_1825: B158DRAFT_1825 - hypothetical protein, at 1,925,632 to 1,925,985
_1825
B158DRAFT_1826: B158DRAFT_1826 - Cold shock proteins, at 1,926,085 to 1,926,291
_1826
B158DRAFT_1827: B158DRAFT_1827 - Domain of unknown function (DU1801)., at 1,926,622 to 1,927,050
_1827
B158DRAFT_1828: B158DRAFT_1828 - hypothetical protein, at 1,927,047 to 1,927,217
_1828
Position (kb)
1926
1927 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1925.143 kb on + strand, within B158DRAFT_1824 at 1925.182 kb on + strand, within B158DRAFT_1824 at 1925.203 kb on + strand, within B158DRAFT_1824 at 1925.203 kb on + strand, within B158DRAFT_1824 at 1925.203 kb on + strand, within B158DRAFT_1824 at 1925.211 kb on - strand, within B158DRAFT_1824 at 1925.211 kb on - strand, within B158DRAFT_1824 at 1925.321 kb on + strand at 1925.368 kb on + strand at 1925.368 kb on + strand at 1925.368 kb on + strand at 1925.368 kb on + strand at 1925.376 kb on - strand at 1925.378 kb on + strand at 1925.386 kb on + strand at 1925.386 kb on + strand at 1925.391 kb on + strand at 1925.391 kb on + strand at 1925.391 kb on + strand at 1925.394 kb on - strand at 1925.399 kb on - strand at 1925.427 kb on + strand at 1925.435 kb on - strand at 1925.436 kb on - strand at 1925.455 kb on + strand at 1925.463 kb on - strand at 1925.572 kb on - strand at 1925.681 kb on + strand, within B158DRAFT_1825 at 1925.681 kb on + strand, within B158DRAFT_1825 at 1925.681 kb on + strand, within B158DRAFT_1825 at 1925.703 kb on - strand, within B158DRAFT_1825 at 1925.734 kb on - strand, within B158DRAFT_1825 at 1925.776 kb on - strand, within B158DRAFT_1825 at 1925.776 kb on - strand, within B158DRAFT_1825 at 1925.839 kb on + strand, within B158DRAFT_1825 at 1925.842 kb on - strand, within B158DRAFT_1825 at 1925.849 kb on - strand, within B158DRAFT_1825 at 1925.877 kb on - strand, within B158DRAFT_1825 at 1925.894 kb on + strand, within B158DRAFT_1825 at 1925.894 kb on + strand, within B158DRAFT_1825 at 1925.902 kb on - strand, within B158DRAFT_1825 at 1925.923 kb on + strand, within B158DRAFT_1825 at 1925.923 kb on + strand, within B158DRAFT_1825 at 1926.148 kb on + strand, within B158DRAFT_1826 at 1926.181 kb on + strand, within B158DRAFT_1826 at 1926.204 kb on - strand, within B158DRAFT_1826 at 1926.307 kb on - strand at 1926.354 kb on - strand at 1926.418 kb on + strand at 1926.548 kb on + strand at 1926.601 kb on - strand at 1926.603 kb on + strand at 1926.603 kb on + strand at 1926.611 kb on - strand at 1926.611 kb on - strand at 1926.613 kb on + strand at 1926.621 kb on - strand at 1926.621 kb on - strand at 1926.621 kb on - strand at 1926.656 kb on + strand at 1926.664 kb on - strand at 1926.670 kb on - strand, within B158DRAFT_1827 at 1926.684 kb on + strand, within B158DRAFT_1827 at 1926.740 kb on + strand, within B158DRAFT_1827 at 1926.743 kb on - strand, within B158DRAFT_1827 at 1926.748 kb on - strand, within B158DRAFT_1827 at 1926.748 kb on - strand, within B158DRAFT_1827 at 1926.785 kb on + strand, within B158DRAFT_1827 at 1926.834 kb on - strand, within B158DRAFT_1827 at 1926.845 kb on + strand, within B158DRAFT_1827 at 1926.853 kb on - strand, within B158DRAFT_1827 at 1926.853 kb on - strand, within B158DRAFT_1827 at 1926.853 kb on - strand, within B158DRAFT_1827 at 1926.853 kb on - strand, within B158DRAFT_1827 at 1926.948 kb on - strand, within B158DRAFT_1827 at 1926.953 kb on - strand, within B158DRAFT_1827 at 1927.044 kb on - strand at 1927.046 kb on + strand at 1927.115 kb on + strand, within B158DRAFT_1828 at 1927.131 kb on + strand, within B158DRAFT_1828 at 1927.206 kb on - strand at 1927.231 kb on + strand at 1927.244 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml remove 1,925,143 + B158DRAFT_1824 0.78 -1.6 1,925,182 + B158DRAFT_1824 0.81 +0.0 1,925,203 + B158DRAFT_1824 0.82 -0.2 1,925,203 + B158DRAFT_1824 0.82 +0.0 1,925,203 + B158DRAFT_1824 0.82 +2.9 1,925,211 - B158DRAFT_1824 0.83 -0.9 1,925,211 - B158DRAFT_1824 0.83 -0.6 1,925,321 + -1.0 1,925,368 + +1.0 1,925,368 + -1.6 1,925,368 + -1.0 1,925,368 + +1.3 1,925,376 - -1.1 1,925,378 + -0.2 1,925,386 + +0.0 1,925,386 + -0.2 1,925,391 + -2.3 1,925,391 + +0.3 1,925,391 + -2.0 1,925,394 - -0.5 1,925,399 - -0.7 1,925,427 + -1.6 1,925,435 - -0.8 1,925,436 - +1.2 1,925,455 + -0.9 1,925,463 - +0.6 1,925,572 - -0.6 1,925,681 + B158DRAFT_1825 0.14 -1.9 1,925,681 + B158DRAFT_1825 0.14 -0.8 1,925,681 + B158DRAFT_1825 0.14 +1.4 1,925,703 - B158DRAFT_1825 0.20 +0.2 1,925,734 - B158DRAFT_1825 0.29 -1.1 1,925,776 - B158DRAFT_1825 0.41 -1.7 1,925,776 - B158DRAFT_1825 0.41 +0.7 1,925,839 + B158DRAFT_1825 0.58 +2.3 1,925,842 - B158DRAFT_1825 0.59 +1.4 1,925,849 - B158DRAFT_1825 0.61 -0.2 1,925,877 - B158DRAFT_1825 0.69 -0.2 1,925,894 + B158DRAFT_1825 0.74 -0.6 1,925,894 + B158DRAFT_1825 0.74 -1.3 1,925,902 - B158DRAFT_1825 0.76 -0.2 1,925,923 + B158DRAFT_1825 0.82 -0.7 1,925,923 + B158DRAFT_1825 0.82 +0.4 1,926,148 + B158DRAFT_1826 0.30 -2.6 1,926,181 + B158DRAFT_1826 0.46 +0.9 1,926,204 - B158DRAFT_1826 0.57 -1.5 1,926,307 - -1.0 1,926,354 - -1.9 1,926,418 + -2.1 1,926,548 + -0.9 1,926,601 - -1.6 1,926,603 + -0.3 1,926,603 + -1.0 1,926,611 - +0.7 1,926,611 - -0.9 1,926,613 + +2.6 1,926,621 - -1.4 1,926,621 - +0.6 1,926,621 - +0.8 1,926,656 + +0.3 1,926,664 - +0.9 1,926,670 - B158DRAFT_1827 0.11 -0.6 1,926,684 + B158DRAFT_1827 0.14 +0.2 1,926,740 + B158DRAFT_1827 0.28 +0.4 1,926,743 - B158DRAFT_1827 0.28 +2.1 1,926,748 - B158DRAFT_1827 0.29 +0.8 1,926,748 - B158DRAFT_1827 0.29 -0.1 1,926,785 + B158DRAFT_1827 0.38 -0.5 1,926,834 - B158DRAFT_1827 0.49 +0.3 1,926,845 + B158DRAFT_1827 0.52 -0.7 1,926,853 - B158DRAFT_1827 0.54 -0.6 1,926,853 - B158DRAFT_1827 0.54 -0.2 1,926,853 - B158DRAFT_1827 0.54 +0.6 1,926,853 - B158DRAFT_1827 0.54 -1.6 1,926,948 - B158DRAFT_1827 0.76 -3.2 1,926,953 - B158DRAFT_1827 0.77 -1.1 1,927,044 - -0.1 1,927,046 + +0.2 1,927,115 + B158DRAFT_1828 0.40 -1.0 1,927,131 + B158DRAFT_1828 0.49 -0.5 1,927,206 - -1.4 1,927,231 + -0.0 1,927,244 + +0.2
Or see this region's nucleotide sequence