Experiment: m.b. Fusidic 0.00049 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1599 and B158DRAFT_1600 overlap by 11 nucleotides B158DRAFT_1600 and B158DRAFT_1601 overlap by 11 nucleotides B158DRAFT_1601 and B158DRAFT_1602 are separated by 30 nucleotides B158DRAFT_1602 and B158DRAFT_1603 are separated by 91 nucleotides
B158DRAFT_1599: B158DRAFT_1599 - lipid-A-disaccharide kinase (EC 2.7.1.130), at 1,659,786 to 1,660,751
_1599
B158DRAFT_1600: B158DRAFT_1600 - Uncharacterized conserved protein, at 1,660,741 to 1,660,926
_1600
B158DRAFT_1601: B158DRAFT_1601 - 3-deoxy-D-manno-octulosonate cytidylyltransferase, at 1,660,916 to 1,661,686
_1601
B158DRAFT_1602: B158DRAFT_1602 - Protein-tyrosine-phosphatase, at 1,661,717 to 1,662,202
_1602
B158DRAFT_1603: B158DRAFT_1603 - arginyl-tRNA synthetase (EC 6.1.1.19), at 1,662,294 to 1,664,060
_1603
Position (kb)
1660
1661
1662 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1660.724 kb on + strand at 1660.724 kb on + strand at 1661.644 kb on + strand at 1661.670 kb on - strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.708 kb on + strand at 1661.716 kb on - strand at 1661.716 kb on - strand at 1661.716 kb on - strand at 1661.749 kb on + strand at 1661.749 kb on + strand at 1661.755 kb on + strand at 1661.757 kb on - strand at 1661.780 kb on - strand, within B158DRAFT_1602 at 1661.818 kb on - strand, within B158DRAFT_1602 at 1661.828 kb on - strand, within B158DRAFT_1602 at 1661.850 kb on + strand, within B158DRAFT_1602 at 1661.853 kb on - strand, within B158DRAFT_1602 at 1661.853 kb on - strand, within B158DRAFT_1602 at 1661.877 kb on + strand, within B158DRAFT_1602 at 1661.885 kb on - strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.909 kb on + strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.917 kb on - strand, within B158DRAFT_1602 at 1661.931 kb on + strand, within B158DRAFT_1602 at 1661.931 kb on + strand, within B158DRAFT_1602 at 1661.931 kb on + strand, within B158DRAFT_1602 at 1661.936 kb on + strand, within B158DRAFT_1602 at 1661.939 kb on - strand, within B158DRAFT_1602 at 1661.939 kb on - strand, within B158DRAFT_1602 at 1661.939 kb on - strand, within B158DRAFT_1602 at 1661.939 kb on - strand, within B158DRAFT_1602 at 1661.941 kb on + strand, within B158DRAFT_1602 at 1661.942 kb on - strand, within B158DRAFT_1602 at 1661.974 kb on + strand, within B158DRAFT_1602 at 1661.982 kb on - strand, within B158DRAFT_1602 at 1662.007 kb on - strand, within B158DRAFT_1602 at 1662.024 kb on - strand, within B158DRAFT_1602 at 1662.103 kb on + strand, within B158DRAFT_1602 at 1662.103 kb on + strand, within B158DRAFT_1602 at 1662.103 kb on - strand, within B158DRAFT_1602 at 1662.111 kb on - strand, within B158DRAFT_1602 at 1662.148 kb on + strand, within B158DRAFT_1602 at 1662.156 kb on - strand at 1662.156 kb on - strand at 1662.170 kb on - strand at 1662.227 kb on + strand at 1662.236 kb on + strand at 1662.236 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml remove 1,660,724 + -0.6 1,660,724 + +0.3 1,661,644 + -1.1 1,661,670 - -0.2 1,661,708 + -0.2 1,661,708 + +0.1 1,661,708 + -0.4 1,661,708 + +0.3 1,661,708 + -0.9 1,661,708 + -1.3 1,661,708 + -0.9 1,661,708 + -0.6 1,661,708 + -0.9 1,661,716 - -0.0 1,661,716 - -0.5 1,661,716 - -1.7 1,661,749 + -0.2 1,661,749 + +0.2 1,661,755 + -1.2 1,661,757 - +0.3 1,661,780 - B158DRAFT_1602 0.13 +0.7 1,661,818 - B158DRAFT_1602 0.21 -1.3 1,661,828 - B158DRAFT_1602 0.23 +2.4 1,661,850 + B158DRAFT_1602 0.27 -1.5 1,661,853 - B158DRAFT_1602 0.28 -2.1 1,661,853 - B158DRAFT_1602 0.28 +0.6 1,661,877 + B158DRAFT_1602 0.33 +0.4 1,661,885 - B158DRAFT_1602 0.35 +0.8 1,661,909 + B158DRAFT_1602 0.40 -1.6 1,661,909 + B158DRAFT_1602 0.40 +0.1 1,661,909 + B158DRAFT_1602 0.40 -2.3 1,661,909 + B158DRAFT_1602 0.40 -1.7 1,661,909 + B158DRAFT_1602 0.40 +0.2 1,661,909 + B158DRAFT_1602 0.40 +1.2 1,661,909 + B158DRAFT_1602 0.40 -1.5 1,661,909 + B158DRAFT_1602 0.40 -1.1 1,661,909 + B158DRAFT_1602 0.40 -0.4 1,661,909 + B158DRAFT_1602 0.40 -1.3 1,661,909 + B158DRAFT_1602 0.40 -0.1 1,661,909 + B158DRAFT_1602 0.40 +0.9 1,661,909 + B158DRAFT_1602 0.40 -2.2 1,661,909 + B158DRAFT_1602 0.40 +0.3 1,661,909 + B158DRAFT_1602 0.40 -0.7 1,661,909 + B158DRAFT_1602 0.40 +2.6 1,661,909 + B158DRAFT_1602 0.40 -0.2 1,661,909 + B158DRAFT_1602 0.40 -1.0 1,661,909 + B158DRAFT_1602 0.40 -2.6 1,661,909 + B158DRAFT_1602 0.40 -0.9 1,661,909 + B158DRAFT_1602 0.40 +0.8 1,661,909 + B158DRAFT_1602 0.40 +0.2 1,661,909 + B158DRAFT_1602 0.40 -0.7 1,661,917 - B158DRAFT_1602 0.41 +1.2 1,661,917 - B158DRAFT_1602 0.41 -0.9 1,661,917 - B158DRAFT_1602 0.41 +2.1 1,661,917 - B158DRAFT_1602 0.41 +0.1 1,661,917 - B158DRAFT_1602 0.41 -1.3 1,661,917 - B158DRAFT_1602 0.41 +0.7 1,661,917 - B158DRAFT_1602 0.41 +0.6 1,661,917 - B158DRAFT_1602 0.41 -0.5 1,661,917 - B158DRAFT_1602 0.41 -0.9 1,661,917 - B158DRAFT_1602 0.41 -0.7 1,661,917 - B158DRAFT_1602 0.41 -0.0 1,661,917 - B158DRAFT_1602 0.41 +0.5 1,661,917 - B158DRAFT_1602 0.41 +0.1 1,661,917 - B158DRAFT_1602 0.41 +0.1 1,661,917 - B158DRAFT_1602 0.41 -0.7 1,661,917 - B158DRAFT_1602 0.41 -0.8 1,661,917 - B158DRAFT_1602 0.41 -2.3 1,661,917 - B158DRAFT_1602 0.41 -0.3 1,661,917 - B158DRAFT_1602 0.41 -0.4 1,661,917 - B158DRAFT_1602 0.41 -0.3 1,661,931 + B158DRAFT_1602 0.44 +0.0 1,661,931 + B158DRAFT_1602 0.44 -0.0 1,661,931 + B158DRAFT_1602 0.44 -2.0 1,661,936 + B158DRAFT_1602 0.45 -0.2 1,661,939 - B158DRAFT_1602 0.46 -0.7 1,661,939 - B158DRAFT_1602 0.46 +0.2 1,661,939 - B158DRAFT_1602 0.46 -0.5 1,661,939 - B158DRAFT_1602 0.46 +0.1 1,661,941 + B158DRAFT_1602 0.46 -1.2 1,661,942 - B158DRAFT_1602 0.46 -0.5 1,661,974 + B158DRAFT_1602 0.53 -1.7 1,661,982 - B158DRAFT_1602 0.55 -0.2 1,662,007 - B158DRAFT_1602 0.60 +0.8 1,662,024 - B158DRAFT_1602 0.63 -1.9 1,662,103 + B158DRAFT_1602 0.79 -1.7 1,662,103 + B158DRAFT_1602 0.79 +0.4 1,662,103 - B158DRAFT_1602 0.79 -0.3 1,662,111 - B158DRAFT_1602 0.81 -0.8 1,662,148 + B158DRAFT_1602 0.89 -0.9 1,662,156 - -1.4 1,662,156 - +0.1 1,662,170 - -1.1 1,662,227 + +1.4 1,662,236 + -1.2 1,662,236 + -2.3
Or see this region's nucleotide sequence