Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1438

Experiment: m.b. Fusidic 0.00049 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1437 and B158DRAFT_1438 are separated by 48 nucleotidesB158DRAFT_1438 and B158DRAFT_1439 overlap by 29 nucleotides B158DRAFT_1437: B158DRAFT_1437 - imidazolonepropionase (EC 3.5.2.7), at 1,488,416 to 1,489,645 _1437 B158DRAFT_1438: B158DRAFT_1438 - formiminoglutamate deiminase, at 1,489,694 to 1,491,103 _1438 B158DRAFT_1439: B158DRAFT_1439 - hypothetical protein, at 1,491,075 to 1,492,811 _1439 Position (kb) 1489 1490 1491 1492Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1488.759 kb on + strand, within B158DRAFT_1437at 1488.759 kb on + strand, within B158DRAFT_1437at 1488.862 kb on + strand, within B158DRAFT_1437at 1488.863 kb on + strand, within B158DRAFT_1437at 1488.867 kb on + strand, within B158DRAFT_1437at 1488.875 kb on - strand, within B158DRAFT_1437at 1488.899 kb on + strand, within B158DRAFT_1437at 1488.912 kb on + strand, within B158DRAFT_1437at 1488.921 kb on - strand, within B158DRAFT_1437at 1488.930 kb on - strand, within B158DRAFT_1437at 1488.952 kb on + strand, within B158DRAFT_1437at 1488.952 kb on + strand, within B158DRAFT_1437at 1489.001 kb on - strand, within B158DRAFT_1437at 1489.001 kb on - strand, within B158DRAFT_1437at 1489.027 kb on - strand, within B158DRAFT_1437at 1489.085 kb on - strand, within B158DRAFT_1437at 1489.093 kb on - strand, within B158DRAFT_1437at 1489.181 kb on + strand, within B158DRAFT_1437at 1489.222 kb on - strand, within B158DRAFT_1437at 1489.286 kb on - strand, within B158DRAFT_1437at 1489.288 kb on + strand, within B158DRAFT_1437at 1489.288 kb on + strand, within B158DRAFT_1437at 1489.296 kb on - strand, within B158DRAFT_1437at 1489.296 kb on - strand, within B158DRAFT_1437at 1489.296 kb on - strand, within B158DRAFT_1437at 1489.296 kb on - strand, within B158DRAFT_1437at 1489.313 kb on + strand, within B158DRAFT_1437at 1489.313 kb on + strand, within B158DRAFT_1437at 1489.394 kb on + strand, within B158DRAFT_1437at 1489.402 kb on + strand, within B158DRAFT_1437at 1489.428 kb on - strand, within B158DRAFT_1437at 1489.469 kb on + strand, within B158DRAFT_1437at 1489.477 kb on - strand, within B158DRAFT_1437at 1489.477 kb on - strand, within B158DRAFT_1437at 1489.488 kb on + strand, within B158DRAFT_1437at 1489.533 kb on - strandat 1489.589 kb on + strandat 1489.624 kb on - strandat 1489.669 kb on + strandat 1489.677 kb on - strandat 1489.740 kb on - strandat 1489.750 kb on - strandat 1489.768 kb on + strandat 1489.776 kb on - strandat 1489.909 kb on + strand, within B158DRAFT_1438at 1489.970 kb on + strand, within B158DRAFT_1438at 1490.120 kb on + strand, within B158DRAFT_1438at 1490.322 kb on + strand, within B158DRAFT_1438at 1490.322 kb on + strand, within B158DRAFT_1438at 1490.328 kb on - strand, within B158DRAFT_1438at 1490.360 kb on + strand, within B158DRAFT_1438at 1490.360 kb on + strand, within B158DRAFT_1438at 1490.360 kb on + strand, within B158DRAFT_1438at 1490.368 kb on - strand, within B158DRAFT_1438at 1490.381 kb on + strand, within B158DRAFT_1438at 1490.381 kb on - strand, within B158DRAFT_1438at 1490.391 kb on - strand, within B158DRAFT_1438at 1490.393 kb on + strand, within B158DRAFT_1438at 1490.444 kb on + strand, within B158DRAFT_1438at 1490.462 kb on - strand, within B158DRAFT_1438at 1490.473 kb on + strand, within B158DRAFT_1438at 1490.480 kb on + strand, within B158DRAFT_1438at 1490.481 kb on - strand, within B158DRAFT_1438at 1490.483 kb on - strand, within B158DRAFT_1438at 1490.505 kb on + strand, within B158DRAFT_1438at 1490.537 kb on + strand, within B158DRAFT_1438at 1490.555 kb on - strand, within B158DRAFT_1438at 1490.657 kb on + strand, within B158DRAFT_1438at 1490.722 kb on - strand, within B158DRAFT_1438at 1490.724 kb on + strand, within B158DRAFT_1438at 1490.724 kb on + strand, within B158DRAFT_1438at 1490.732 kb on - strand, within B158DRAFT_1438at 1490.732 kb on - strand, within B158DRAFT_1438at 1490.804 kb on - strand, within B158DRAFT_1438at 1490.893 kb on + strand, within B158DRAFT_1438at 1490.901 kb on - strand, within B158DRAFT_1438at 1491.120 kb on - strandat 1491.130 kb on - strandat 1491.130 kb on - strandat 1491.464 kb on + strand, within B158DRAFT_1439at 1491.464 kb on + strand, within B158DRAFT_1439at 1491.472 kb on - strand, within B158DRAFT_1439at 1491.472 kb on - strand, within B158DRAFT_1439at 1491.478 kb on + strand, within B158DRAFT_1439at 1491.743 kb on - strand, within B158DRAFT_1439at 1491.769 kb on + strand, within B158DRAFT_1439at 1491.769 kb on + strand, within B158DRAFT_1439at 1491.777 kb on - strand, within B158DRAFT_1439at 1491.777 kb on - strand, within B158DRAFT_1439at 1491.777 kb on - strand, within B158DRAFT_1439at 1491.784 kb on - strand, within B158DRAFT_1439at 1491.859 kb on + strand, within B158DRAFT_1439at 1491.859 kb on + strand, within B158DRAFT_1439at 1491.909 kb on + strand, within B158DRAFT_1439at 1491.924 kb on - strand, within B158DRAFT_1439at 1491.977 kb on + strand, within B158DRAFT_1439at 1491.987 kb on - strand, within B158DRAFT_1439at 1492.044 kb on + strand, within B158DRAFT_1439at 1492.078 kb on + strand, within B158DRAFT_1439at 1492.086 kb on - strand, within B158DRAFT_1439at 1492.086 kb on - strand, within B158DRAFT_1439at 1492.091 kb on - strand, within B158DRAFT_1439at 1492.092 kb on - strand, within B158DRAFT_1439

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml
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1,488,759 + B158DRAFT_1437 0.28 +0.0
1,488,759 + B158DRAFT_1437 0.28 -1.2
1,488,862 + B158DRAFT_1437 0.36 -0.6
1,488,863 + B158DRAFT_1437 0.36 +1.2
1,488,867 + B158DRAFT_1437 0.37 -0.2
1,488,875 - B158DRAFT_1437 0.37 +2.4
1,488,899 + B158DRAFT_1437 0.39 +0.7
1,488,912 + B158DRAFT_1437 0.40 +2.1
1,488,921 - B158DRAFT_1437 0.41 +0.4
1,488,930 - B158DRAFT_1437 0.42 +0.1
1,488,952 + B158DRAFT_1437 0.44 -0.9
1,488,952 + B158DRAFT_1437 0.44 +0.3
1,489,001 - B158DRAFT_1437 0.48 -0.9
1,489,001 - B158DRAFT_1437 0.48 -1.2
1,489,027 - B158DRAFT_1437 0.50 -0.6
1,489,085 - B158DRAFT_1437 0.54 +0.8
1,489,093 - B158DRAFT_1437 0.55 +1.0
1,489,181 + B158DRAFT_1437 0.62 -1.1
1,489,222 - B158DRAFT_1437 0.66 -1.9
1,489,286 - B158DRAFT_1437 0.71 +1.2
1,489,288 + B158DRAFT_1437 0.71 +1.9
1,489,288 + B158DRAFT_1437 0.71 -0.1
1,489,296 - B158DRAFT_1437 0.72 -2.4
1,489,296 - B158DRAFT_1437 0.72 +1.2
1,489,296 - B158DRAFT_1437 0.72 -0.4
1,489,296 - B158DRAFT_1437 0.72 -0.8
1,489,313 + B158DRAFT_1437 0.73 +0.7
1,489,313 + B158DRAFT_1437 0.73 +2.2
1,489,394 + B158DRAFT_1437 0.80 +0.2
1,489,402 + B158DRAFT_1437 0.80 +1.0
1,489,428 - B158DRAFT_1437 0.82 +0.6
1,489,469 + B158DRAFT_1437 0.86 -1.3
1,489,477 - B158DRAFT_1437 0.86 +1.4
1,489,477 - B158DRAFT_1437 0.86 -0.7
1,489,488 + B158DRAFT_1437 0.87 -1.5
1,489,533 - -1.1
1,489,589 + +0.1
1,489,624 - -1.1
1,489,669 + -1.8
1,489,677 - -0.2
1,489,740 - -0.8
1,489,750 - -0.7
1,489,768 + +1.4
1,489,776 - -1.1
1,489,909 + B158DRAFT_1438 0.15 -0.4
1,489,970 + B158DRAFT_1438 0.20 +0.9
1,490,120 + B158DRAFT_1438 0.30 +0.1
1,490,322 + B158DRAFT_1438 0.45 +0.1
1,490,322 + B158DRAFT_1438 0.45 +0.4
1,490,328 - B158DRAFT_1438 0.45 -2.8
1,490,360 + B158DRAFT_1438 0.47 +0.7
1,490,360 + B158DRAFT_1438 0.47 -0.0
1,490,360 + B158DRAFT_1438 0.47 +3.3
1,490,368 - B158DRAFT_1438 0.48 -1.4
1,490,381 + B158DRAFT_1438 0.49 -1.2
1,490,381 - B158DRAFT_1438 0.49 -0.9
1,490,391 - B158DRAFT_1438 0.49 +0.0
1,490,393 + B158DRAFT_1438 0.50 -0.4
1,490,444 + B158DRAFT_1438 0.53 -0.7
1,490,462 - B158DRAFT_1438 0.54 -0.9
1,490,473 + B158DRAFT_1438 0.55 +0.0
1,490,480 + B158DRAFT_1438 0.56 +1.2
1,490,481 - B158DRAFT_1438 0.56 +1.2
1,490,483 - B158DRAFT_1438 0.56 +0.3
1,490,505 + B158DRAFT_1438 0.58 +2.2
1,490,537 + B158DRAFT_1438 0.60 -2.4
1,490,555 - B158DRAFT_1438 0.61 +1.8
1,490,657 + B158DRAFT_1438 0.68 -1.4
1,490,722 - B158DRAFT_1438 0.73 -0.5
1,490,724 + B158DRAFT_1438 0.73 -0.6
1,490,724 + B158DRAFT_1438 0.73 -0.1
1,490,732 - B158DRAFT_1438 0.74 -0.4
1,490,732 - B158DRAFT_1438 0.74 +1.3
1,490,804 - B158DRAFT_1438 0.79 +0.0
1,490,893 + B158DRAFT_1438 0.85 +0.1
1,490,901 - B158DRAFT_1438 0.86 +0.3
1,491,120 - +0.3
1,491,130 - -0.6
1,491,130 - -1.3
1,491,464 + B158DRAFT_1439 0.22 -0.7
1,491,464 + B158DRAFT_1439 0.22 -0.3
1,491,472 - B158DRAFT_1439 0.23 -2.0
1,491,472 - B158DRAFT_1439 0.23 +0.5
1,491,478 + B158DRAFT_1439 0.23 -1.3
1,491,743 - B158DRAFT_1439 0.38 +0.6
1,491,769 + B158DRAFT_1439 0.40 +1.8
1,491,769 + B158DRAFT_1439 0.40 +0.0
1,491,777 - B158DRAFT_1439 0.40 -0.5
1,491,777 - B158DRAFT_1439 0.40 -1.0
1,491,777 - B158DRAFT_1439 0.40 -0.6
1,491,784 - B158DRAFT_1439 0.41 -1.1
1,491,859 + B158DRAFT_1439 0.45 -0.4
1,491,859 + B158DRAFT_1439 0.45 +0.8
1,491,909 + B158DRAFT_1439 0.48 -0.2
1,491,924 - B158DRAFT_1439 0.49 +0.5
1,491,977 + B158DRAFT_1439 0.52 +0.5
1,491,987 - B158DRAFT_1439 0.53 -1.4
1,492,044 + B158DRAFT_1439 0.56 -0.6
1,492,078 + B158DRAFT_1439 0.58 -0.4
1,492,086 - B158DRAFT_1439 0.58 -1.3
1,492,086 - B158DRAFT_1439 0.58 -0.5
1,492,091 - B158DRAFT_1439 0.58 +0.2
1,492,092 - B158DRAFT_1439 0.59 -1.0

Or see this region's nucleotide sequence