Experiment: m.b. Fusidic 0.00049 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1435 and B158DRAFT_1436 are separated by 119 nucleotides B158DRAFT_1436 and B158DRAFT_1437 are separated by 91 nucleotides B158DRAFT_1437 and B158DRAFT_1438 are separated by 48 nucleotides
B158DRAFT_1435: B158DRAFT_1435 - N-formylglutamate amidohydrolase, at 1,486,571 to 1,487,779
_1435
B158DRAFT_1436: B158DRAFT_1436 - azurin, at 1,487,899 to 1,488,324
_1436
B158DRAFT_1437: B158DRAFT_1437 - imidazolonepropionase (EC 3.5.2.7), at 1,488,416 to 1,489,645
_1437
B158DRAFT_1438: B158DRAFT_1438 - formiminoglutamate deiminase, at 1,489,694 to 1,491,103
_1438
Position (kb)
1488
1489
1490 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1487.449 kb on - strand, within B158DRAFT_1435 at 1487.516 kb on - strand, within B158DRAFT_1435 at 1487.528 kb on - strand, within B158DRAFT_1435 at 1487.587 kb on + strand, within B158DRAFT_1435 at 1487.587 kb on + strand, within B158DRAFT_1435 at 1487.587 kb on + strand, within B158DRAFT_1435 at 1487.595 kb on - strand, within B158DRAFT_1435 at 1487.595 kb on - strand, within B158DRAFT_1435 at 1487.611 kb on + strand, within B158DRAFT_1435 at 1487.611 kb on + strand, within B158DRAFT_1435 at 1487.611 kb on + strand, within B158DRAFT_1435 at 1487.619 kb on - strand, within B158DRAFT_1435 at 1487.619 kb on - strand, within B158DRAFT_1435 at 1487.619 kb on - strand, within B158DRAFT_1435 at 1487.619 kb on - strand, within B158DRAFT_1435 at 1487.629 kb on - strand, within B158DRAFT_1435 at 1487.629 kb on - strand, within B158DRAFT_1435 at 1487.635 kb on + strand, within B158DRAFT_1435 at 1487.635 kb on + strand, within B158DRAFT_1435 at 1487.635 kb on + strand, within B158DRAFT_1435 at 1487.635 kb on + strand, within B158DRAFT_1435 at 1487.635 kb on + strand, within B158DRAFT_1435 at 1487.643 kb on - strand, within B158DRAFT_1435 at 1487.643 kb on - strand, within B158DRAFT_1435 at 1487.643 kb on - strand, within B158DRAFT_1435 at 1487.643 kb on - strand, within B158DRAFT_1435 at 1487.643 kb on - strand, within B158DRAFT_1435 at 1487.855 kb on - strand at 1487.883 kb on + strand at 1487.891 kb on - strand at 1487.891 kb on - strand at 1487.891 kb on - strand at 1488.055 kb on + strand, within B158DRAFT_1436 at 1488.079 kb on + strand, within B158DRAFT_1436 at 1488.079 kb on + strand, within B158DRAFT_1436 at 1488.079 kb on + strand, within B158DRAFT_1436 at 1488.087 kb on - strand, within B158DRAFT_1436 at 1488.087 kb on - strand, within B158DRAFT_1436 at 1488.087 kb on - strand, within B158DRAFT_1436 at 1488.087 kb on - strand, within B158DRAFT_1436 at 1488.105 kb on + strand, within B158DRAFT_1436 at 1488.113 kb on - strand, within B158DRAFT_1436 at 1488.113 kb on - strand, within B158DRAFT_1436 at 1488.115 kb on + strand, within B158DRAFT_1436 at 1488.115 kb on + strand, within B158DRAFT_1436 at 1488.144 kb on + strand, within B158DRAFT_1436 at 1488.172 kb on + strand, within B158DRAFT_1436 at 1488.174 kb on - strand, within B158DRAFT_1436 at 1488.180 kb on - strand, within B158DRAFT_1436 at 1488.233 kb on + strand, within B158DRAFT_1436 at 1488.381 kb on - strand at 1488.404 kb on + strand at 1488.413 kb on + strand at 1488.413 kb on + strand at 1488.421 kb on - strand at 1488.421 kb on - strand at 1488.517 kb on + strand at 1488.517 kb on + strand at 1488.517 kb on + strand at 1488.525 kb on - strand at 1488.525 kb on - strand at 1488.525 kb on - strand at 1488.525 kb on - strand at 1488.561 kb on + strand, within B158DRAFT_1437 at 1488.569 kb on - strand, within B158DRAFT_1437 at 1488.621 kb on + strand, within B158DRAFT_1437 at 1488.759 kb on + strand, within B158DRAFT_1437 at 1488.759 kb on + strand, within B158DRAFT_1437 at 1488.862 kb on + strand, within B158DRAFT_1437 at 1488.863 kb on + strand, within B158DRAFT_1437 at 1488.867 kb on + strand, within B158DRAFT_1437 at 1488.875 kb on - strand, within B158DRAFT_1437 at 1488.899 kb on + strand, within B158DRAFT_1437 at 1488.912 kb on + strand, within B158DRAFT_1437 at 1488.921 kb on - strand, within B158DRAFT_1437 at 1488.930 kb on - strand, within B158DRAFT_1437 at 1488.952 kb on + strand, within B158DRAFT_1437 at 1488.952 kb on + strand, within B158DRAFT_1437 at 1489.001 kb on - strand, within B158DRAFT_1437 at 1489.001 kb on - strand, within B158DRAFT_1437 at 1489.027 kb on - strand, within B158DRAFT_1437 at 1489.085 kb on - strand, within B158DRAFT_1437 at 1489.093 kb on - strand, within B158DRAFT_1437 at 1489.181 kb on + strand, within B158DRAFT_1437 at 1489.222 kb on - strand, within B158DRAFT_1437 at 1489.286 kb on - strand, within B158DRAFT_1437 at 1489.288 kb on + strand, within B158DRAFT_1437 at 1489.288 kb on + strand, within B158DRAFT_1437 at 1489.296 kb on - strand, within B158DRAFT_1437 at 1489.296 kb on - strand, within B158DRAFT_1437 at 1489.296 kb on - strand, within B158DRAFT_1437 at 1489.296 kb on - strand, within B158DRAFT_1437 at 1489.313 kb on + strand, within B158DRAFT_1437 at 1489.313 kb on + strand, within B158DRAFT_1437 at 1489.394 kb on + strand, within B158DRAFT_1437 at 1489.402 kb on + strand, within B158DRAFT_1437 at 1489.428 kb on - strand, within B158DRAFT_1437 at 1489.469 kb on + strand, within B158DRAFT_1437 at 1489.477 kb on - strand, within B158DRAFT_1437 at 1489.477 kb on - strand, within B158DRAFT_1437 at 1489.488 kb on + strand, within B158DRAFT_1437 at 1489.533 kb on - strand at 1489.589 kb on + strand at 1489.624 kb on - strand at 1489.669 kb on + strand at 1489.677 kb on - strand at 1489.740 kb on - strand at 1489.750 kb on - strand at 1489.768 kb on + strand at 1489.776 kb on - strand at 1489.909 kb on + strand, within B158DRAFT_1438 at 1489.970 kb on + strand, within B158DRAFT_1438 at 1490.120 kb on + strand, within B158DRAFT_1438 at 1490.322 kb on + strand, within B158DRAFT_1438 at 1490.322 kb on + strand, within B158DRAFT_1438 at 1490.328 kb on - strand, within B158DRAFT_1438 at 1490.360 kb on + strand, within B158DRAFT_1438 at 1490.360 kb on + strand, within B158DRAFT_1438 at 1490.360 kb on + strand, within B158DRAFT_1438 at 1490.368 kb on - strand, within B158DRAFT_1438 at 1490.381 kb on + strand, within B158DRAFT_1438 at 1490.381 kb on - strand, within B158DRAFT_1438 at 1490.391 kb on - strand, within B158DRAFT_1438 at 1490.393 kb on + strand, within B158DRAFT_1438 at 1490.444 kb on + strand, within B158DRAFT_1438 at 1490.462 kb on - strand, within B158DRAFT_1438 at 1490.473 kb on + strand, within B158DRAFT_1438 at 1490.480 kb on + strand, within B158DRAFT_1438 at 1490.481 kb on - strand, within B158DRAFT_1438 at 1490.483 kb on - strand, within B158DRAFT_1438 at 1490.505 kb on + strand, within B158DRAFT_1438 at 1490.537 kb on + strand, within B158DRAFT_1438 at 1490.555 kb on - strand, within B158DRAFT_1438
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml remove 1,487,449 - B158DRAFT_1435 0.73 -1.6 1,487,516 - B158DRAFT_1435 0.78 +1.1 1,487,528 - B158DRAFT_1435 0.79 +0.6 1,487,587 + B158DRAFT_1435 0.84 -1.2 1,487,587 + B158DRAFT_1435 0.84 -1.7 1,487,587 + B158DRAFT_1435 0.84 -0.2 1,487,595 - B158DRAFT_1435 0.85 -2.3 1,487,595 - B158DRAFT_1435 0.85 +1.1 1,487,611 + B158DRAFT_1435 0.86 -1.9 1,487,611 + B158DRAFT_1435 0.86 -1.4 1,487,611 + B158DRAFT_1435 0.86 -3.6 1,487,619 - B158DRAFT_1435 0.87 -0.9 1,487,619 - B158DRAFT_1435 0.87 -0.8 1,487,619 - B158DRAFT_1435 0.87 -0.1 1,487,619 - B158DRAFT_1435 0.87 -0.5 1,487,629 - B158DRAFT_1435 0.88 +0.5 1,487,629 - B158DRAFT_1435 0.88 -3.0 1,487,635 + B158DRAFT_1435 0.88 +0.2 1,487,635 + B158DRAFT_1435 0.88 -0.6 1,487,635 + B158DRAFT_1435 0.88 -1.4 1,487,635 + B158DRAFT_1435 0.88 -1.3 1,487,635 + B158DRAFT_1435 0.88 -0.8 1,487,643 - B158DRAFT_1435 0.89 -2.0 1,487,643 - B158DRAFT_1435 0.89 +0.6 1,487,643 - B158DRAFT_1435 0.89 -1.9 1,487,643 - B158DRAFT_1435 0.89 -1.3 1,487,643 - B158DRAFT_1435 0.89 -2.0 1,487,855 - -0.0 1,487,883 + +0.5 1,487,891 - -0.6 1,487,891 - -1.2 1,487,891 - -0.2 1,488,055 + B158DRAFT_1436 0.37 -0.6 1,488,079 + B158DRAFT_1436 0.42 -1.1 1,488,079 + B158DRAFT_1436 0.42 -0.5 1,488,079 + B158DRAFT_1436 0.42 -1.2 1,488,087 - B158DRAFT_1436 0.44 -2.4 1,488,087 - B158DRAFT_1436 0.44 -2.7 1,488,087 - B158DRAFT_1436 0.44 -0.7 1,488,087 - B158DRAFT_1436 0.44 -0.9 1,488,105 + B158DRAFT_1436 0.48 -0.1 1,488,113 - B158DRAFT_1436 0.50 -1.7 1,488,113 - B158DRAFT_1436 0.50 -1.5 1,488,115 + B158DRAFT_1436 0.51 -2.2 1,488,115 + B158DRAFT_1436 0.51 +0.4 1,488,144 + B158DRAFT_1436 0.58 -0.2 1,488,172 + B158DRAFT_1436 0.64 +0.8 1,488,174 - B158DRAFT_1436 0.65 -0.7 1,488,180 - B158DRAFT_1436 0.66 -0.6 1,488,233 + B158DRAFT_1436 0.78 +0.0 1,488,381 - +0.4 1,488,404 + -1.5 1,488,413 + -1.3 1,488,413 + -0.9 1,488,421 - +0.0 1,488,421 - +1.4 1,488,517 + +1.5 1,488,517 + -0.7 1,488,517 + -0.5 1,488,525 - -2.0 1,488,525 - +0.1 1,488,525 - +0.7 1,488,525 - +0.6 1,488,561 + B158DRAFT_1437 0.12 -0.8 1,488,569 - B158DRAFT_1437 0.12 -0.9 1,488,621 + B158DRAFT_1437 0.17 +0.2 1,488,759 + B158DRAFT_1437 0.28 +0.0 1,488,759 + B158DRAFT_1437 0.28 -1.2 1,488,862 + B158DRAFT_1437 0.36 -0.6 1,488,863 + B158DRAFT_1437 0.36 +1.2 1,488,867 + B158DRAFT_1437 0.37 -0.2 1,488,875 - B158DRAFT_1437 0.37 +2.4 1,488,899 + B158DRAFT_1437 0.39 +0.7 1,488,912 + B158DRAFT_1437 0.40 +2.1 1,488,921 - B158DRAFT_1437 0.41 +0.4 1,488,930 - B158DRAFT_1437 0.42 +0.1 1,488,952 + B158DRAFT_1437 0.44 -0.9 1,488,952 + B158DRAFT_1437 0.44 +0.3 1,489,001 - B158DRAFT_1437 0.48 -0.9 1,489,001 - B158DRAFT_1437 0.48 -1.2 1,489,027 - B158DRAFT_1437 0.50 -0.6 1,489,085 - B158DRAFT_1437 0.54 +0.8 1,489,093 - B158DRAFT_1437 0.55 +1.0 1,489,181 + B158DRAFT_1437 0.62 -1.1 1,489,222 - B158DRAFT_1437 0.66 -1.9 1,489,286 - B158DRAFT_1437 0.71 +1.2 1,489,288 + B158DRAFT_1437 0.71 +1.9 1,489,288 + B158DRAFT_1437 0.71 -0.1 1,489,296 - B158DRAFT_1437 0.72 -2.4 1,489,296 - B158DRAFT_1437 0.72 +1.2 1,489,296 - B158DRAFT_1437 0.72 -0.4 1,489,296 - B158DRAFT_1437 0.72 -0.8 1,489,313 + B158DRAFT_1437 0.73 +0.7 1,489,313 + B158DRAFT_1437 0.73 +2.2 1,489,394 + B158DRAFT_1437 0.80 +0.2 1,489,402 + B158DRAFT_1437 0.80 +1.0 1,489,428 - B158DRAFT_1437 0.82 +0.6 1,489,469 + B158DRAFT_1437 0.86 -1.3 1,489,477 - B158DRAFT_1437 0.86 +1.4 1,489,477 - B158DRAFT_1437 0.86 -0.7 1,489,488 + B158DRAFT_1437 0.87 -1.5 1,489,533 - -1.1 1,489,589 + +0.1 1,489,624 - -1.1 1,489,669 + -1.8 1,489,677 - -0.2 1,489,740 - -0.8 1,489,750 - -0.7 1,489,768 + +1.4 1,489,776 - -1.1 1,489,909 + B158DRAFT_1438 0.15 -0.4 1,489,970 + B158DRAFT_1438 0.20 +0.9 1,490,120 + B158DRAFT_1438 0.30 +0.1 1,490,322 + B158DRAFT_1438 0.45 +0.1 1,490,322 + B158DRAFT_1438 0.45 +0.4 1,490,328 - B158DRAFT_1438 0.45 -2.8 1,490,360 + B158DRAFT_1438 0.47 +0.7 1,490,360 + B158DRAFT_1438 0.47 -0.0 1,490,360 + B158DRAFT_1438 0.47 +3.3 1,490,368 - B158DRAFT_1438 0.48 -1.4 1,490,381 + B158DRAFT_1438 0.49 -1.2 1,490,381 - B158DRAFT_1438 0.49 -0.9 1,490,391 - B158DRAFT_1438 0.49 +0.0 1,490,393 + B158DRAFT_1438 0.50 -0.4 1,490,444 + B158DRAFT_1438 0.53 -0.7 1,490,462 - B158DRAFT_1438 0.54 -0.9 1,490,473 + B158DRAFT_1438 0.55 +0.0 1,490,480 + B158DRAFT_1438 0.56 +1.2 1,490,481 - B158DRAFT_1438 0.56 +1.2 1,490,483 - B158DRAFT_1438 0.56 +0.3 1,490,505 + B158DRAFT_1438 0.58 +2.2 1,490,537 + B158DRAFT_1438 0.60 -2.4 1,490,555 - B158DRAFT_1438 0.61 +1.8
Or see this region's nucleotide sequence