Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1247

Experiment: m.b. Fusidic 0.00049 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1245 and B158DRAFT_1246 are separated by 106 nucleotidesB158DRAFT_1246 and B158DRAFT_1247 are separated by 189 nucleotidesB158DRAFT_1247 and B158DRAFT_1248 overlap by 4 nucleotides B158DRAFT_1245: B158DRAFT_1245 - Outer membrane cobalamin receptor protein, at 1,284,328 to 1,286,283 _1245 B158DRAFT_1246: B158DRAFT_1246 - hypothetical protein, at 1,286,390 to 1,286,695 _1246 B158DRAFT_1247: B158DRAFT_1247 - cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein (EC 1.10.3.10), at 1,286,885 to 1,288,306 _1247 B158DRAFT_1248: B158DRAFT_1248 - cytochrome d oxidase, subunit II (cydB), at 1,288,303 to 1,289,319 _1248 Position (kb) 1286 1287 1288 1289Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 1285.892 kb on + strand, within B158DRAFT_1245at 1285.892 kb on - strand, within B158DRAFT_1245at 1285.892 kb on - strand, within B158DRAFT_1245at 1285.956 kb on + strand, within B158DRAFT_1245at 1285.956 kb on + strand, within B158DRAFT_1245at 1285.963 kb on - strand, within B158DRAFT_1245at 1285.964 kb on - strand, within B158DRAFT_1245at 1285.964 kb on - strand, within B158DRAFT_1245at 1285.987 kb on - strand, within B158DRAFT_1245at 1285.987 kb on - strand, within B158DRAFT_1245at 1286.062 kb on + strand, within B158DRAFT_1245at 1286.062 kb on + strand, within B158DRAFT_1245at 1286.070 kb on - strand, within B158DRAFT_1245at 1286.126 kb on - strandat 1286.328 kb on - strandat 1286.338 kb on + strandat 1286.345 kb on + strandat 1286.345 kb on + strandat 1286.347 kb on - strandat 1286.372 kb on - strandat 1286.380 kb on - strandat 1286.409 kb on + strandat 1286.419 kb on + strandat 1286.425 kb on - strand, within B158DRAFT_1246at 1286.427 kb on - strand, within B158DRAFT_1246at 1286.427 kb on - strand, within B158DRAFT_1246at 1286.435 kb on - strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.578 kb on + strand, within B158DRAFT_1246at 1286.579 kb on + strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.586 kb on - strand, within B158DRAFT_1246at 1286.598 kb on + strand, within B158DRAFT_1246at 1286.653 kb on + strand, within B158DRAFT_1246at 1286.679 kb on + strandat 1286.684 kb on + strandat 1286.687 kb on - strandat 1286.711 kb on + strandat 1286.802 kb on + strandat 1286.811 kb on + strandat 1286.811 kb on + strandat 1286.812 kb on - strandat 1286.816 kb on + strandat 1286.817 kb on - strandat 1286.817 kb on - strandat 1286.817 kb on - strandat 1286.834 kb on - strandat 1286.901 kb on - strandat 1286.906 kb on - strandat 1287.026 kb on + strandat 1287.161 kb on + strand, within B158DRAFT_1247at 1287.161 kb on + strand, within B158DRAFT_1247at 1287.169 kb on - strand, within B158DRAFT_1247at 1287.169 kb on - strand, within B158DRAFT_1247at 1287.169 kb on - strand, within B158DRAFT_1247at 1287.169 kb on - strand, within B158DRAFT_1247at 1287.179 kb on - strand, within B158DRAFT_1247at 1287.225 kb on + strand, within B158DRAFT_1247at 1287.227 kb on + strand, within B158DRAFT_1247at 1287.233 kb on - strand, within B158DRAFT_1247at 1287.233 kb on - strand, within B158DRAFT_1247at 1287.233 kb on - strand, within B158DRAFT_1247at 1287.268 kb on - strand, within B158DRAFT_1247at 1287.299 kb on + strand, within B158DRAFT_1247at 1287.314 kb on - strand, within B158DRAFT_1247at 1287.429 kb on - strand, within B158DRAFT_1247at 1287.429 kb on - strand, within B158DRAFT_1247at 1287.445 kb on + strand, within B158DRAFT_1247at 1287.498 kb on - strand, within B158DRAFT_1247at 1287.589 kb on - strand, within B158DRAFT_1247at 1287.599 kb on - strand, within B158DRAFT_1247at 1287.648 kb on - strand, within B158DRAFT_1247at 1287.648 kb on - strand, within B158DRAFT_1247at 1287.750 kb on - strand, within B158DRAFT_1247at 1287.808 kb on + strand, within B158DRAFT_1247at 1287.859 kb on + strand, within B158DRAFT_1247at 1287.867 kb on - strand, within B158DRAFT_1247at 1287.906 kb on + strand, within B158DRAFT_1247at 1287.913 kb on + strand, within B158DRAFT_1247at 1287.919 kb on - strand, within B158DRAFT_1247at 1287.959 kb on + strand, within B158DRAFT_1247at 1287.959 kb on + strand, within B158DRAFT_1247at 1287.959 kb on + strand, within B158DRAFT_1247at 1287.959 kb on + strand, within B158DRAFT_1247at 1287.967 kb on + strand, within B158DRAFT_1247at 1287.967 kb on + strand, within B158DRAFT_1247at 1287.967 kb on - strand, within B158DRAFT_1247at 1287.967 kb on - strand, within B158DRAFT_1247at 1287.967 kb on - strand, within B158DRAFT_1247at 1287.967 kb on - strand, within B158DRAFT_1247at 1287.967 kb on - strand, within B158DRAFT_1247at 1287.967 kb on - strand, within B158DRAFT_1247at 1287.993 kb on - strand, within B158DRAFT_1247at 1288.043 kb on + strand, within B158DRAFT_1247at 1288.043 kb on + strand, within B158DRAFT_1247at 1288.049 kb on + strand, within B158DRAFT_1247at 1288.069 kb on + strand, within B158DRAFT_1247at 1288.069 kb on + strand, within B158DRAFT_1247at 1288.069 kb on + strand, within B158DRAFT_1247at 1288.069 kb on + strand, within B158DRAFT_1247at 1288.077 kb on - strand, within B158DRAFT_1247at 1288.077 kb on - strand, within B158DRAFT_1247at 1288.077 kb on - strand, within B158DRAFT_1247at 1288.077 kb on - strand, within B158DRAFT_1247at 1288.077 kb on - strand, within B158DRAFT_1247at 1288.077 kb on - strand, within B158DRAFT_1247at 1288.156 kb on + strand, within B158DRAFT_1247at 1288.164 kb on - strandat 1288.171 kb on + strandat 1288.179 kb on - strandat 1288.201 kb on + strandat 1288.246 kb on + strandat 1288.326 kb on - strandat 1288.348 kb on + strandat 1288.373 kb on + strandat 1288.450 kb on + strand, within B158DRAFT_1248at 1288.460 kb on + strand, within B158DRAFT_1248at 1288.468 kb on - strand, within B158DRAFT_1248at 1288.508 kb on - strand, within B158DRAFT_1248at 1288.518 kb on - strand, within B158DRAFT_1248at 1288.527 kb on + strand, within B158DRAFT_1248at 1288.536 kb on + strand, within B158DRAFT_1248at 1288.536 kb on + strand, within B158DRAFT_1248at 1288.558 kb on + strand, within B158DRAFT_1248at 1288.607 kb on + strand, within B158DRAFT_1248at 1288.647 kb on + strand, within B158DRAFT_1248at 1288.655 kb on - strand, within B158DRAFT_1248at 1288.660 kb on - strand, within B158DRAFT_1248at 1288.691 kb on + strand, within B158DRAFT_1248at 1288.696 kb on + strand, within B158DRAFT_1248at 1288.721 kb on - strand, within B158DRAFT_1248at 1288.728 kb on + strand, within B158DRAFT_1248at 1288.728 kb on + strand, within B158DRAFT_1248at 1288.728 kb on + strand, within B158DRAFT_1248at 1288.728 kb on + strand, within B158DRAFT_1248at 1288.728 kb on + strand, within B158DRAFT_1248at 1288.730 kb on + strand, within B158DRAFT_1248at 1288.736 kb on - strand, within B158DRAFT_1248at 1288.736 kb on - strand, within B158DRAFT_1248at 1289.042 kb on - strand, within B158DRAFT_1248at 1289.042 kb on - strand, within B158DRAFT_1248at 1289.042 kb on - strand, within B158DRAFT_1248at 1289.073 kb on - strand, within B158DRAFT_1248at 1289.136 kb on - strand, within B158DRAFT_1248at 1289.162 kb on - strand, within B158DRAFT_1248at 1289.162 kb on - strand, within B158DRAFT_1248at 1289.186 kb on + strand, within B158DRAFT_1248at 1289.242 kb on - strandat 1289.301 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml
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1,285,892 + B158DRAFT_1245 0.80 -0.9
1,285,892 - B158DRAFT_1245 0.80 +1.2
1,285,892 - B158DRAFT_1245 0.80 -0.7
1,285,956 + B158DRAFT_1245 0.83 -2.1
1,285,956 + B158DRAFT_1245 0.83 -0.4
1,285,963 - B158DRAFT_1245 0.84 -1.3
1,285,964 - B158DRAFT_1245 0.84 -0.6
1,285,964 - B158DRAFT_1245 0.84 -0.9
1,285,987 - B158DRAFT_1245 0.85 -1.3
1,285,987 - B158DRAFT_1245 0.85 -0.6
1,286,062 + B158DRAFT_1245 0.89 +0.8
1,286,062 + B158DRAFT_1245 0.89 -1.1
1,286,070 - B158DRAFT_1245 0.89 -2.3
1,286,126 - -1.0
1,286,328 - -0.3
1,286,338 + -0.5
1,286,345 + -0.5
1,286,345 + +1.1
1,286,347 - -0.4
1,286,372 - -1.6
1,286,380 - -0.9
1,286,409 + -0.4
1,286,419 + -1.0
1,286,425 - B158DRAFT_1246 0.11 +0.3
1,286,427 - B158DRAFT_1246 0.12 -1.0
1,286,427 - B158DRAFT_1246 0.12 -0.6
1,286,435 - B158DRAFT_1246 0.15 -1.3
1,286,578 + B158DRAFT_1246 0.61 -1.2
1,286,578 + B158DRAFT_1246 0.61 +0.5
1,286,578 + B158DRAFT_1246 0.61 -0.6
1,286,578 + B158DRAFT_1246 0.61 +0.6
1,286,578 + B158DRAFT_1246 0.61 -0.4
1,286,578 + B158DRAFT_1246 0.61 +0.8
1,286,578 + B158DRAFT_1246 0.61 +1.0
1,286,578 + B158DRAFT_1246 0.61 -0.4
1,286,578 + B158DRAFT_1246 0.61 +0.5
1,286,578 + B158DRAFT_1246 0.61 +0.4
1,286,578 + B158DRAFT_1246 0.61 +0.1
1,286,578 + B158DRAFT_1246 0.61 -0.2
1,286,578 + B158DRAFT_1246 0.61 +1.6
1,286,579 + B158DRAFT_1246 0.62 +1.0
1,286,586 - B158DRAFT_1246 0.64 -0.5
1,286,586 - B158DRAFT_1246 0.64 -0.1
1,286,586 - B158DRAFT_1246 0.64 +0.4
1,286,586 - B158DRAFT_1246 0.64 +2.0
1,286,586 - B158DRAFT_1246 0.64 -1.2
1,286,586 - B158DRAFT_1246 0.64 -0.3
1,286,586 - B158DRAFT_1246 0.64 +0.9
1,286,586 - B158DRAFT_1246 0.64 -0.2
1,286,586 - B158DRAFT_1246 0.64 +0.1
1,286,586 - B158DRAFT_1246 0.64 -0.9
1,286,586 - B158DRAFT_1246 0.64 -1.4
1,286,586 - B158DRAFT_1246 0.64 -0.9
1,286,586 - B158DRAFT_1246 0.64 +0.6
1,286,586 - B158DRAFT_1246 0.64 +1.2
1,286,586 - B158DRAFT_1246 0.64 -0.7
1,286,586 - B158DRAFT_1246 0.64 -0.2
1,286,586 - B158DRAFT_1246 0.64 -2.4
1,286,586 - B158DRAFT_1246 0.64 -1.0
1,286,586 - B158DRAFT_1246 0.64 -0.9
1,286,586 - B158DRAFT_1246 0.64 -0.7
1,286,598 + B158DRAFT_1246 0.68 -2.4
1,286,653 + B158DRAFT_1246 0.86 -1.2
1,286,679 + -1.7
1,286,684 + +1.9
1,286,687 - -0.1
1,286,711 + +2.6
1,286,802 + +0.7
1,286,811 + +0.9
1,286,811 + -0.8
1,286,812 - +0.5
1,286,816 + +0.0
1,286,817 - +1.1
1,286,817 - -1.1
1,286,817 - +1.2
1,286,834 - -1.6
1,286,901 - +0.4
1,286,906 - +0.5
1,287,026 + +0.1
1,287,161 + B158DRAFT_1247 0.19 +0.1
1,287,161 + B158DRAFT_1247 0.19 +0.2
1,287,169 - B158DRAFT_1247 0.20 +0.8
1,287,169 - B158DRAFT_1247 0.20 -0.7
1,287,169 - B158DRAFT_1247 0.20 +0.3
1,287,169 - B158DRAFT_1247 0.20 +1.4
1,287,179 - B158DRAFT_1247 0.21 +0.5
1,287,225 + B158DRAFT_1247 0.24 +0.5
1,287,227 + B158DRAFT_1247 0.24 +1.6
1,287,233 - B158DRAFT_1247 0.24 +5.0
1,287,233 - B158DRAFT_1247 0.24 +0.8
1,287,233 - B158DRAFT_1247 0.24 +0.2
1,287,268 - B158DRAFT_1247 0.27 +0.1
1,287,299 + B158DRAFT_1247 0.29 -0.4
1,287,314 - B158DRAFT_1247 0.30 +1.4
1,287,429 - B158DRAFT_1247 0.38 +1.7
1,287,429 - B158DRAFT_1247 0.38 +1.1
1,287,445 + B158DRAFT_1247 0.39 -0.1
1,287,498 - B158DRAFT_1247 0.43 -0.5
1,287,589 - B158DRAFT_1247 0.50 +0.3
1,287,599 - B158DRAFT_1247 0.50 +0.4
1,287,648 - B158DRAFT_1247 0.54 +2.2
1,287,648 - B158DRAFT_1247 0.54 +0.6
1,287,750 - B158DRAFT_1247 0.61 -0.1
1,287,808 + B158DRAFT_1247 0.65 +2.8
1,287,859 + B158DRAFT_1247 0.68 +1.4
1,287,867 - B158DRAFT_1247 0.69 +0.5
1,287,906 + B158DRAFT_1247 0.72 -1.2
1,287,913 + B158DRAFT_1247 0.72 -0.2
1,287,919 - B158DRAFT_1247 0.73 +2.2
1,287,959 + B158DRAFT_1247 0.76 -0.2
1,287,959 + B158DRAFT_1247 0.76 +0.9
1,287,959 + B158DRAFT_1247 0.76 -0.1
1,287,959 + B158DRAFT_1247 0.76 -0.2
1,287,967 + B158DRAFT_1247 0.76 -0.1
1,287,967 + B158DRAFT_1247 0.76 +0.4
1,287,967 - B158DRAFT_1247 0.76 +0.8
1,287,967 - B158DRAFT_1247 0.76 +0.8
1,287,967 - B158DRAFT_1247 0.76 +2.2
1,287,967 - B158DRAFT_1247 0.76 +1.3
1,287,967 - B158DRAFT_1247 0.76 +0.9
1,287,967 - B158DRAFT_1247 0.76 +1.0
1,287,993 - B158DRAFT_1247 0.78 +2.7
1,288,043 + B158DRAFT_1247 0.81 +1.7
1,288,043 + B158DRAFT_1247 0.81 +0.2
1,288,049 + B158DRAFT_1247 0.82 -1.0
1,288,069 + B158DRAFT_1247 0.83 +0.6
1,288,069 + B158DRAFT_1247 0.83 +0.3
1,288,069 + B158DRAFT_1247 0.83 +0.7
1,288,069 + B158DRAFT_1247 0.83 -0.0
1,288,077 - B158DRAFT_1247 0.84 +0.4
1,288,077 - B158DRAFT_1247 0.84 +1.1
1,288,077 - B158DRAFT_1247 0.84 -0.3
1,288,077 - B158DRAFT_1247 0.84 +0.3
1,288,077 - B158DRAFT_1247 0.84 +0.7
1,288,077 - B158DRAFT_1247 0.84 +0.1
1,288,156 + B158DRAFT_1247 0.89 +1.3
1,288,164 - +0.2
1,288,171 + -0.1
1,288,179 - +1.5
1,288,201 + +0.3
1,288,246 + +0.1
1,288,326 - +0.8
1,288,348 + +0.5
1,288,373 + +0.1
1,288,450 + B158DRAFT_1248 0.14 +1.5
1,288,460 + B158DRAFT_1248 0.15 +1.9
1,288,468 - B158DRAFT_1248 0.16 -0.3
1,288,508 - B158DRAFT_1248 0.20 +0.7
1,288,518 - B158DRAFT_1248 0.21 -0.5
1,288,527 + B158DRAFT_1248 0.22 +0.3
1,288,536 + B158DRAFT_1248 0.23 +0.4
1,288,536 + B158DRAFT_1248 0.23 -0.1
1,288,558 + B158DRAFT_1248 0.25 +0.5
1,288,607 + B158DRAFT_1248 0.30 +0.3
1,288,647 + B158DRAFT_1248 0.34 +0.0
1,288,655 - B158DRAFT_1248 0.35 +1.0
1,288,660 - B158DRAFT_1248 0.35 +0.0
1,288,691 + B158DRAFT_1248 0.38 -0.0
1,288,696 + B158DRAFT_1248 0.39 +0.7
1,288,721 - B158DRAFT_1248 0.41 +0.6
1,288,728 + B158DRAFT_1248 0.42 +0.4
1,288,728 + B158DRAFT_1248 0.42 -0.5
1,288,728 + B158DRAFT_1248 0.42 +0.2
1,288,728 + B158DRAFT_1248 0.42 +0.6
1,288,728 + B158DRAFT_1248 0.42 -0.6
1,288,730 + B158DRAFT_1248 0.42 -0.7
1,288,736 - B158DRAFT_1248 0.43 -0.3
1,288,736 - B158DRAFT_1248 0.43 -0.6
1,289,042 - B158DRAFT_1248 0.73 +0.7
1,289,042 - B158DRAFT_1248 0.73 +0.7
1,289,042 - B158DRAFT_1248 0.73 +0.9
1,289,073 - B158DRAFT_1248 0.76 +1.4
1,289,136 - B158DRAFT_1248 0.82 -0.1
1,289,162 - B158DRAFT_1248 0.84 +1.5
1,289,162 - B158DRAFT_1248 0.84 -1.1
1,289,186 + B158DRAFT_1248 0.87 +1.0
1,289,242 - +0.7
1,289,301 + -0.5

Or see this region's nucleotide sequence