Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1112

Experiment: m.b. Fusidic 0.00049 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1111 and B158DRAFT_1112 are separated by 253 nucleotidesB158DRAFT_1112 and B158DRAFT_1113 are separated by 9 nucleotides B158DRAFT_1111: B158DRAFT_1111 - DNA-3-methyladenine glycosylase II (EC 3.2.2.21), at 1,147,165 to 1,148,550 _1111 B158DRAFT_1112: B158DRAFT_1112 - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit, at 1,148,804 to 1,149,763 _1112 B158DRAFT_1113: B158DRAFT_1113 - tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain, at 1,149,773 to 1,151,047 _1113 Position (kb) 1148 1149 1150Strain fitness (log2 ratio) -2 -1 0 1 2at 1147.807 kb on + strand, within B158DRAFT_1111at 1147.807 kb on + strand, within B158DRAFT_1111at 1147.815 kb on - strand, within B158DRAFT_1111at 1147.830 kb on + strand, within B158DRAFT_1111at 1147.838 kb on - strand, within B158DRAFT_1111at 1147.855 kb on - strand, within B158DRAFT_1111at 1147.865 kb on - strand, within B158DRAFT_1111at 1147.926 kb on - strand, within B158DRAFT_1111at 1147.926 kb on - strand, within B158DRAFT_1111at 1147.926 kb on - strand, within B158DRAFT_1111at 1147.926 kb on - strand, within B158DRAFT_1111at 1147.926 kb on - strand, within B158DRAFT_1111at 1147.933 kb on + strand, within B158DRAFT_1111at 1147.941 kb on - strand, within B158DRAFT_1111at 1148.022 kb on - strand, within B158DRAFT_1111at 1148.022 kb on - strand, within B158DRAFT_1111at 1148.035 kb on + strand, within B158DRAFT_1111at 1148.059 kb on + strand, within B158DRAFT_1111at 1148.059 kb on + strand, within B158DRAFT_1111at 1148.136 kb on - strand, within B158DRAFT_1111at 1148.136 kb on - strand, within B158DRAFT_1111at 1148.137 kb on - strand, within B158DRAFT_1111at 1148.166 kb on + strand, within B158DRAFT_1111at 1148.173 kb on - strand, within B158DRAFT_1111at 1148.174 kb on - strand, within B158DRAFT_1111at 1148.174 kb on - strand, within B158DRAFT_1111at 1148.232 kb on + strand, within B158DRAFT_1111at 1148.245 kb on - strand, within B158DRAFT_1111at 1148.247 kb on + strand, within B158DRAFT_1111at 1148.247 kb on + strand, within B158DRAFT_1111at 1148.250 kb on - strand, within B158DRAFT_1111at 1148.255 kb on + strand, within B158DRAFT_1111at 1148.255 kb on - strand, within B158DRAFT_1111at 1148.261 kb on + strand, within B158DRAFT_1111at 1148.263 kb on - strand, within B158DRAFT_1111at 1148.263 kb on - strand, within B158DRAFT_1111at 1148.328 kb on - strand, within B158DRAFT_1111at 1148.336 kb on + strand, within B158DRAFT_1111at 1148.342 kb on - strand, within B158DRAFT_1111at 1148.344 kb on + strand, within B158DRAFT_1111at 1148.344 kb on + strand, within B158DRAFT_1111at 1148.344 kb on + strand, within B158DRAFT_1111at 1148.344 kb on + strand, within B158DRAFT_1111at 1148.344 kb on + strand, within B158DRAFT_1111at 1148.352 kb on - strand, within B158DRAFT_1111at 1148.352 kb on - strand, within B158DRAFT_1111at 1148.391 kb on + strand, within B158DRAFT_1111at 1148.412 kb on + strandat 1148.412 kb on + strandat 1148.420 kb on - strandat 1148.424 kb on + strandat 1148.424 kb on + strandat 1148.432 kb on - strandat 1148.437 kb on - strandat 1148.466 kb on - strandat 1148.481 kb on + strandat 1148.503 kb on + strandat 1148.503 kb on + strandat 1148.504 kb on - strandat 1148.713 kb on + strandat 1148.713 kb on + strandat 1148.713 kb on + strandat 1148.713 kb on + strandat 1148.713 kb on + strandat 1148.713 kb on + strandat 1148.721 kb on - strandat 1148.721 kb on - strandat 1148.721 kb on - strandat 1148.721 kb on - strandat 1148.721 kb on - strandat 1148.721 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml
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1,147,807 + B158DRAFT_1111 0.46 -1.0
1,147,807 + B158DRAFT_1111 0.46 -1.3
1,147,815 - B158DRAFT_1111 0.47 -1.1
1,147,830 + B158DRAFT_1111 0.48 -0.5
1,147,838 - B158DRAFT_1111 0.49 -0.2
1,147,855 - B158DRAFT_1111 0.50 -2.0
1,147,865 - B158DRAFT_1111 0.51 -0.1
1,147,926 - B158DRAFT_1111 0.55 -1.0
1,147,926 - B158DRAFT_1111 0.55 -1.3
1,147,926 - B158DRAFT_1111 0.55 -0.9
1,147,926 - B158DRAFT_1111 0.55 -0.1
1,147,926 - B158DRAFT_1111 0.55 -1.8
1,147,933 + B158DRAFT_1111 0.55 -0.8
1,147,941 - B158DRAFT_1111 0.56 -2.0
1,148,022 - B158DRAFT_1111 0.62 -0.8
1,148,022 - B158DRAFT_1111 0.62 -1.7
1,148,035 + B158DRAFT_1111 0.63 +0.5
1,148,059 + B158DRAFT_1111 0.65 -1.8
1,148,059 + B158DRAFT_1111 0.65 -1.2
1,148,136 - B158DRAFT_1111 0.70 -1.2
1,148,136 - B158DRAFT_1111 0.70 +0.4
1,148,137 - B158DRAFT_1111 0.70 -1.1
1,148,166 + B158DRAFT_1111 0.72 -0.4
1,148,173 - B158DRAFT_1111 0.73 -1.2
1,148,174 - B158DRAFT_1111 0.73 +0.7
1,148,174 - B158DRAFT_1111 0.73 -1.4
1,148,232 + B158DRAFT_1111 0.77 -1.2
1,148,245 - B158DRAFT_1111 0.78 -0.7
1,148,247 + B158DRAFT_1111 0.78 -1.1
1,148,247 + B158DRAFT_1111 0.78 -0.1
1,148,250 - B158DRAFT_1111 0.78 -0.3
1,148,255 + B158DRAFT_1111 0.79 -2.6
1,148,255 - B158DRAFT_1111 0.79 -2.1
1,148,261 + B158DRAFT_1111 0.79 -2.7
1,148,263 - B158DRAFT_1111 0.79 -1.0
1,148,263 - B158DRAFT_1111 0.79 -0.1
1,148,328 - B158DRAFT_1111 0.84 -0.1
1,148,336 + B158DRAFT_1111 0.84 -1.0
1,148,342 - B158DRAFT_1111 0.85 -0.9
1,148,344 + B158DRAFT_1111 0.85 -0.4
1,148,344 + B158DRAFT_1111 0.85 -0.8
1,148,344 + B158DRAFT_1111 0.85 -0.9
1,148,344 + B158DRAFT_1111 0.85 -1.8
1,148,344 + B158DRAFT_1111 0.85 -0.1
1,148,352 - B158DRAFT_1111 0.86 -1.1
1,148,352 - B158DRAFT_1111 0.86 +1.0
1,148,391 + B158DRAFT_1111 0.88 -1.2
1,148,412 + -0.6
1,148,412 + +1.9
1,148,420 - -2.4
1,148,424 + -1.4
1,148,424 + +0.5
1,148,432 - +0.2
1,148,437 - -0.4
1,148,466 - +0.1
1,148,481 + -1.1
1,148,503 + -1.1
1,148,503 + -0.4
1,148,504 - -0.1
1,148,713 + -0.8
1,148,713 + +0.0
1,148,713 + -1.1
1,148,713 + -0.9
1,148,713 + -1.7
1,148,713 + -1.2
1,148,721 - +1.8
1,148,721 - -1.2
1,148,721 - -1.6
1,148,721 - +1.2
1,148,721 - -0.3
1,148,721 - -0.1

Or see this region's nucleotide sequence