Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1102

Experiment: m.b. Fusidic 0.00049 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1101 and B158DRAFT_1102 are separated by 17 nucleotidesB158DRAFT_1102 and B158DRAFT_1103 are separated by 311 nucleotidesB158DRAFT_1103 and B158DRAFT_1104 are separated by 190 nucleotides B158DRAFT_1101: B158DRAFT_1101 - Imidazolonepropionase and related amidohydrolases, at 1,139,530 to 1,140,960 _1101 B158DRAFT_1102: B158DRAFT_1102 - hypothetical protein, at 1,140,978 to 1,141,652 _1102 B158DRAFT_1103: B158DRAFT_1103 - hypothetical protein, at 1,141,964 to 1,142,275 _1103 B158DRAFT_1104: B158DRAFT_1104 - Putative intracellular protease/amidase, at 1,142,466 to 1,143,143 _1104 Position (kb) 1140 1141 1142Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1140.083 kb on - strand, within B158DRAFT_1101at 1140.123 kb on + strand, within B158DRAFT_1101at 1140.192 kb on + strand, within B158DRAFT_1101at 1140.230 kb on - strand, within B158DRAFT_1101at 1140.236 kb on - strand, within B158DRAFT_1101at 1140.269 kb on + strand, within B158DRAFT_1101at 1140.345 kb on + strand, within B158DRAFT_1101at 1140.362 kb on + strand, within B158DRAFT_1101at 1140.370 kb on - strand, within B158DRAFT_1101at 1140.381 kb on + strand, within B158DRAFT_1101at 1140.394 kb on + strand, within B158DRAFT_1101at 1140.394 kb on + strand, within B158DRAFT_1101at 1140.394 kb on + strand, within B158DRAFT_1101at 1140.394 kb on + strand, within B158DRAFT_1101at 1140.416 kb on + strand, within B158DRAFT_1101at 1140.563 kb on + strand, within B158DRAFT_1101at 1140.571 kb on - strand, within B158DRAFT_1101at 1140.572 kb on + strand, within B158DRAFT_1101at 1140.609 kb on + strand, within B158DRAFT_1101at 1140.640 kb on - strand, within B158DRAFT_1101at 1140.651 kb on + strand, within B158DRAFT_1101at 1140.654 kb on - strand, within B158DRAFT_1101at 1140.757 kb on - strand, within B158DRAFT_1101at 1140.944 kb on + strandat 1140.966 kb on - strandat 1140.969 kb on + strandat 1141.112 kb on - strand, within B158DRAFT_1102at 1141.180 kb on + strand, within B158DRAFT_1102at 1141.180 kb on + strand, within B158DRAFT_1102at 1141.220 kb on + strand, within B158DRAFT_1102at 1141.260 kb on + strand, within B158DRAFT_1102at 1141.423 kb on - strand, within B158DRAFT_1102at 1141.500 kb on + strand, within B158DRAFT_1102at 1141.510 kb on + strand, within B158DRAFT_1102at 1141.532 kb on + strand, within B158DRAFT_1102at 1141.532 kb on + strand, within B158DRAFT_1102at 1141.532 kb on + strand, within B158DRAFT_1102at 1141.540 kb on - strand, within B158DRAFT_1102at 1141.540 kb on - strand, within B158DRAFT_1102at 1141.540 kb on - strand, within B158DRAFT_1102at 1141.540 kb on - strand, within B158DRAFT_1102at 1141.540 kb on - strand, within B158DRAFT_1102at 1141.840 kb on + strandat 1141.848 kb on - strandat 1141.850 kb on + strandat 1141.899 kb on + strandat 1142.007 kb on + strand, within B158DRAFT_1103at 1142.024 kb on - strand, within B158DRAFT_1103at 1142.043 kb on + strand, within B158DRAFT_1103at 1142.051 kb on - strand, within B158DRAFT_1103at 1142.053 kb on + strand, within B158DRAFT_1103at 1142.178 kb on - strand, within B158DRAFT_1103at 1142.187 kb on + strand, within B158DRAFT_1103at 1142.193 kb on - strand, within B158DRAFT_1103at 1142.203 kb on + strand, within B158DRAFT_1103at 1142.244 kb on - strandat 1142.244 kb on - strandat 1142.244 kb on - strandat 1142.311 kb on + strandat 1142.311 kb on + strandat 1142.319 kb on - strandat 1142.319 kb on - strandat 1142.319 kb on - strandat 1142.322 kb on + strandat 1142.322 kb on + strandat 1142.322 kb on + strandat 1142.322 kb on + strandat 1142.322 kb on + strandat 1142.322 kb on + strandat 1142.322 kb on + strandat 1142.322 kb on + strandat 1142.322 kb on + strandat 1142.322 kb on + strandat 1142.322 kb on + strandat 1142.322 kb on + strandat 1142.322 kb on + strandat 1142.322 kb on + strandat 1142.330 kb on - strandat 1142.330 kb on - strandat 1142.330 kb on - strandat 1142.330 kb on - strandat 1142.330 kb on - strandat 1142.330 kb on - strandat 1142.330 kb on - strandat 1142.330 kb on - strandat 1142.330 kb on - strandat 1142.390 kb on - strandat 1142.420 kb on + strandat 1142.428 kb on - strandat 1142.448 kb on + strandat 1142.456 kb on - strandat 1142.456 kb on - strandat 1142.526 kb on + strandat 1142.541 kb on - strand, within B158DRAFT_1104at 1142.595 kb on + strand, within B158DRAFT_1104at 1142.615 kb on + strand, within B158DRAFT_1104at 1142.623 kb on - strand, within B158DRAFT_1104

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml
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1,140,083 - B158DRAFT_1101 0.39 -1.5
1,140,123 + B158DRAFT_1101 0.41 +0.1
1,140,192 + B158DRAFT_1101 0.46 -0.3
1,140,230 - B158DRAFT_1101 0.49 -1.0
1,140,236 - B158DRAFT_1101 0.49 -1.9
1,140,269 + B158DRAFT_1101 0.52 -0.8
1,140,345 + B158DRAFT_1101 0.57 -1.2
1,140,362 + B158DRAFT_1101 0.58 +1.1
1,140,370 - B158DRAFT_1101 0.59 +0.5
1,140,381 + B158DRAFT_1101 0.59 +0.4
1,140,394 + B158DRAFT_1101 0.60 +0.9
1,140,394 + B158DRAFT_1101 0.60 -1.2
1,140,394 + B158DRAFT_1101 0.60 -0.4
1,140,394 + B158DRAFT_1101 0.60 -0.4
1,140,416 + B158DRAFT_1101 0.62 -0.4
1,140,563 + B158DRAFT_1101 0.72 -0.0
1,140,571 - B158DRAFT_1101 0.73 -0.8
1,140,572 + B158DRAFT_1101 0.73 -0.1
1,140,609 + B158DRAFT_1101 0.75 +0.3
1,140,640 - B158DRAFT_1101 0.78 -0.4
1,140,651 + B158DRAFT_1101 0.78 -1.0
1,140,654 - B158DRAFT_1101 0.79 -1.8
1,140,757 - B158DRAFT_1101 0.86 +2.3
1,140,944 + -0.8
1,140,966 - -0.5
1,140,969 + -0.8
1,141,112 - B158DRAFT_1102 0.20 -0.6
1,141,180 + B158DRAFT_1102 0.30 -0.3
1,141,180 + B158DRAFT_1102 0.30 +2.0
1,141,220 + B158DRAFT_1102 0.36 +0.5
1,141,260 + B158DRAFT_1102 0.42 +0.0
1,141,423 - B158DRAFT_1102 0.66 -0.5
1,141,500 + B158DRAFT_1102 0.77 -0.5
1,141,510 + B158DRAFT_1102 0.79 -0.6
1,141,532 + B158DRAFT_1102 0.82 -2.5
1,141,532 + B158DRAFT_1102 0.82 -1.5
1,141,532 + B158DRAFT_1102 0.82 +0.5
1,141,540 - B158DRAFT_1102 0.83 -1.2
1,141,540 - B158DRAFT_1102 0.83 +0.3
1,141,540 - B158DRAFT_1102 0.83 +1.8
1,141,540 - B158DRAFT_1102 0.83 -0.9
1,141,540 - B158DRAFT_1102 0.83 -1.1
1,141,840 + +0.0
1,141,848 - -0.1
1,141,850 + -0.8
1,141,899 + -1.3
1,142,007 + B158DRAFT_1103 0.14 -0.5
1,142,024 - B158DRAFT_1103 0.19 -0.5
1,142,043 + B158DRAFT_1103 0.25 +1.7
1,142,051 - B158DRAFT_1103 0.28 -0.0
1,142,053 + B158DRAFT_1103 0.29 +2.9
1,142,178 - B158DRAFT_1103 0.69 -0.4
1,142,187 + B158DRAFT_1103 0.71 +1.7
1,142,193 - B158DRAFT_1103 0.73 -1.1
1,142,203 + B158DRAFT_1103 0.77 -0.2
1,142,244 - -0.3
1,142,244 - -0.5
1,142,244 - +2.2
1,142,311 + -2.6
1,142,311 + +0.2
1,142,319 - -1.3
1,142,319 - -0.4
1,142,319 - +0.2
1,142,322 + -0.7
1,142,322 + -1.2
1,142,322 + -0.2
1,142,322 + -1.3
1,142,322 + -0.1
1,142,322 + -0.4
1,142,322 + +1.5
1,142,322 + -2.8
1,142,322 + -0.3
1,142,322 + -1.1
1,142,322 + +0.7
1,142,322 + +0.0
1,142,322 + +0.3
1,142,322 + -2.6
1,142,330 - -0.9
1,142,330 - -0.8
1,142,330 - -0.4
1,142,330 - -0.4
1,142,330 - -0.1
1,142,330 - -1.6
1,142,330 - +3.4
1,142,330 - +0.0
1,142,330 - -0.6
1,142,390 - +0.6
1,142,420 + -0.7
1,142,428 - -0.1
1,142,448 + -1.8
1,142,456 - -1.4
1,142,456 - -2.5
1,142,526 + -1.0
1,142,541 - B158DRAFT_1104 0.11 -1.0
1,142,595 + B158DRAFT_1104 0.19 -1.0
1,142,615 + B158DRAFT_1104 0.22 +0.6
1,142,623 - B158DRAFT_1104 0.23 -1.2

Or see this region's nucleotide sequence