Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1007

Experiment: m.b. Fusidic 0.00049 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1006 and B158DRAFT_1007 are separated by 248 nucleotidesB158DRAFT_1007 and B158DRAFT_1008 overlap by 1 nucleotides B158DRAFT_1006: B158DRAFT_1006 - MoxR-like ATPases, at 1,046,402 to 1,047,361 _1006 B158DRAFT_1007: B158DRAFT_1007 - fatty oxidation complex, beta subunit FadI, at 1,047,610 to 1,048,929 _1007 B158DRAFT_1008: B158DRAFT_1008 - fatty oxidation complex, alpha subunit FadJ, at 1,048,929 to 1,051,076 _1008 Position (kb) 1047 1048 1049Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1046.680 kb on + strand, within B158DRAFT_1006at 1046.680 kb on + strand, within B158DRAFT_1006at 1046.680 kb on + strand, within B158DRAFT_1006at 1046.688 kb on - strand, within B158DRAFT_1006at 1046.688 kb on - strand, within B158DRAFT_1006at 1046.716 kb on - strand, within B158DRAFT_1006at 1046.725 kb on - strand, within B158DRAFT_1006at 1046.772 kb on + strand, within B158DRAFT_1006at 1046.772 kb on + strand, within B158DRAFT_1006at 1046.772 kb on + strand, within B158DRAFT_1006at 1046.780 kb on - strand, within B158DRAFT_1006at 1046.780 kb on - strand, within B158DRAFT_1006at 1046.780 kb on - strand, within B158DRAFT_1006at 1046.780 kb on - strand, within B158DRAFT_1006at 1046.785 kb on - strand, within B158DRAFT_1006at 1046.786 kb on + strand, within B158DRAFT_1006at 1046.786 kb on + strand, within B158DRAFT_1006at 1046.786 kb on + strand, within B158DRAFT_1006at 1046.786 kb on + strand, within B158DRAFT_1006at 1046.786 kb on + strand, within B158DRAFT_1006at 1046.794 kb on - strand, within B158DRAFT_1006at 1046.831 kb on - strand, within B158DRAFT_1006at 1046.843 kb on - strand, within B158DRAFT_1006at 1046.901 kb on + strand, within B158DRAFT_1006at 1046.909 kb on - strand, within B158DRAFT_1006at 1046.909 kb on - strand, within B158DRAFT_1006at 1046.939 kb on - strand, within B158DRAFT_1006at 1046.945 kb on + strand, within B158DRAFT_1006at 1047.020 kb on + strand, within B158DRAFT_1006at 1047.028 kb on - strand, within B158DRAFT_1006at 1047.036 kb on + strand, within B158DRAFT_1006at 1047.044 kb on - strand, within B158DRAFT_1006at 1047.063 kb on - strand, within B158DRAFT_1006at 1047.128 kb on + strand, within B158DRAFT_1006at 1047.154 kb on + strand, within B158DRAFT_1006at 1047.189 kb on + strand, within B158DRAFT_1006at 1047.189 kb on + strand, within B158DRAFT_1006at 1047.189 kb on + strand, within B158DRAFT_1006at 1047.189 kb on + strand, within B158DRAFT_1006at 1047.197 kb on - strand, within B158DRAFT_1006at 1047.197 kb on - strand, within B158DRAFT_1006at 1047.227 kb on + strand, within B158DRAFT_1006at 1047.234 kb on - strand, within B158DRAFT_1006at 1047.245 kb on - strand, within B158DRAFT_1006at 1047.291 kb on + strandat 1047.372 kb on + strandat 1047.400 kb on + strandat 1047.421 kb on - strandat 1047.511 kb on + strandat 1047.511 kb on + strandat 1047.511 kb on - strandat 1047.590 kb on + strandat 1047.598 kb on - strandat 1047.606 kb on + strandat 1047.646 kb on + strandat 1047.646 kb on + strandat 1047.646 kb on + strandat 1047.646 kb on + strandat 1047.646 kb on + strandat 1047.646 kb on + strandat 1047.654 kb on - strandat 1047.654 kb on - strandat 1047.659 kb on - strandat 1047.716 kb on + strandat 1047.717 kb on + strandat 1047.725 kb on + strandat 1047.725 kb on + strandat 1047.725 kb on - strandat 1047.735 kb on + strandat 1047.735 kb on + strandat 1047.735 kb on + strandat 1047.735 kb on + strandat 1047.743 kb on - strand, within B158DRAFT_1007at 1047.743 kb on - strand, within B158DRAFT_1007at 1047.743 kb on - strand, within B158DRAFT_1007at 1047.743 kb on - strand, within B158DRAFT_1007at 1047.876 kb on - strand, within B158DRAFT_1007at 1047.882 kb on + strand, within B158DRAFT_1007at 1047.890 kb on - strand, within B158DRAFT_1007at 1047.905 kb on + strand, within B158DRAFT_1007at 1047.913 kb on - strand, within B158DRAFT_1007at 1047.956 kb on + strand, within B158DRAFT_1007at 1047.957 kb on - strand, within B158DRAFT_1007at 1047.967 kb on + strand, within B158DRAFT_1007at 1047.988 kb on + strand, within B158DRAFT_1007at 1047.996 kb on + strand, within B158DRAFT_1007at 1047.996 kb on + strand, within B158DRAFT_1007at 1048.004 kb on - strand, within B158DRAFT_1007at 1048.018 kb on + strand, within B158DRAFT_1007at 1048.208 kb on + strand, within B158DRAFT_1007at 1048.214 kb on - strand, within B158DRAFT_1007at 1048.214 kb on - strand, within B158DRAFT_1007at 1048.216 kb on + strand, within B158DRAFT_1007at 1048.219 kb on - strand, within B158DRAFT_1007at 1048.224 kb on - strand, within B158DRAFT_1007at 1048.224 kb on - strand, within B158DRAFT_1007at 1048.255 kb on + strand, within B158DRAFT_1007at 1048.255 kb on + strand, within B158DRAFT_1007at 1048.255 kb on + strand, within B158DRAFT_1007at 1048.304 kb on + strand, within B158DRAFT_1007at 1048.311 kb on + strand, within B158DRAFT_1007at 1048.319 kb on - strand, within B158DRAFT_1007at 1048.346 kb on - strand, within B158DRAFT_1007at 1048.366 kb on + strand, within B158DRAFT_1007at 1048.383 kb on + strand, within B158DRAFT_1007at 1048.383 kb on + strand, within B158DRAFT_1007at 1048.438 kb on + strand, within B158DRAFT_1007at 1048.438 kb on + strand, within B158DRAFT_1007at 1048.438 kb on + strand, within B158DRAFT_1007at 1048.438 kb on + strand, within B158DRAFT_1007at 1048.507 kb on + strand, within B158DRAFT_1007at 1048.507 kb on + strand, within B158DRAFT_1007at 1048.507 kb on + strand, within B158DRAFT_1007at 1048.507 kb on - strand, within B158DRAFT_1007at 1048.515 kb on - strand, within B158DRAFT_1007at 1048.560 kb on - strand, within B158DRAFT_1007at 1048.570 kb on + strand, within B158DRAFT_1007at 1048.575 kb on + strand, within B158DRAFT_1007at 1048.575 kb on + strand, within B158DRAFT_1007at 1048.583 kb on - strand, within B158DRAFT_1007at 1048.583 kb on - strand, within B158DRAFT_1007at 1048.583 kb on - strand, within B158DRAFT_1007at 1048.588 kb on - strand, within B158DRAFT_1007at 1048.632 kb on - strand, within B158DRAFT_1007at 1048.639 kb on + strand, within B158DRAFT_1007at 1048.645 kb on + strand, within B158DRAFT_1007at 1048.653 kb on - strand, within B158DRAFT_1007at 1048.765 kb on - strand, within B158DRAFT_1007at 1048.791 kb on - strand, within B158DRAFT_1007at 1048.824 kb on - strandat 1048.840 kb on - strandat 1048.840 kb on - strandat 1048.913 kb on + strandat 1048.914 kb on + strandat 1049.004 kb on + strandat 1049.077 kb on + strandat 1049.077 kb on + strandat 1049.077 kb on + strandat 1049.077 kb on + strandat 1049.085 kb on - strandat 1049.101 kb on + strandat 1049.144 kb on + strand, within B158DRAFT_1008at 1049.144 kb on + strand, within B158DRAFT_1008at 1049.144 kb on + strand, within B158DRAFT_1008at 1049.145 kb on - strand, within B158DRAFT_1008at 1049.152 kb on - strand, within B158DRAFT_1008at 1049.152 kb on - strand, within B158DRAFT_1008at 1049.169 kb on - strand, within B158DRAFT_1008at 1049.169 kb on - strand, within B158DRAFT_1008at 1049.169 kb on - strand, within B158DRAFT_1008at 1049.170 kb on + strand, within B158DRAFT_1008at 1049.172 kb on + strand, within B158DRAFT_1008at 1049.230 kb on - strand, within B158DRAFT_1008at 1049.230 kb on - strand, within B158DRAFT_1008at 1049.266 kb on - strand, within B158DRAFT_1008at 1049.278 kb on + strand, within B158DRAFT_1008at 1049.286 kb on - strand, within B158DRAFT_1008at 1049.387 kb on - strand, within B158DRAFT_1008at 1049.423 kb on - strand, within B158DRAFT_1008at 1049.449 kb on + strand, within B158DRAFT_1008at 1049.452 kb on - strand, within B158DRAFT_1008at 1049.457 kb on - strand, within B158DRAFT_1008at 1049.467 kb on + strand, within B158DRAFT_1008at 1049.535 kb on + strand, within B158DRAFT_1008at 1049.586 kb on - strand, within B158DRAFT_1008at 1049.593 kb on + strand, within B158DRAFT_1008at 1049.593 kb on + strand, within B158DRAFT_1008at 1049.601 kb on - strand, within B158DRAFT_1008at 1049.601 kb on - strand, within B158DRAFT_1008at 1049.601 kb on - strand, within B158DRAFT_1008at 1049.615 kb on + strand, within B158DRAFT_1008at 1049.623 kb on - strand, within B158DRAFT_1008at 1049.636 kb on - strand, within B158DRAFT_1008at 1049.750 kb on + strand, within B158DRAFT_1008at 1049.794 kb on + strand, within B158DRAFT_1008at 1049.794 kb on + strand, within B158DRAFT_1008at 1049.797 kb on - strand, within B158DRAFT_1008at 1049.833 kb on + strand, within B158DRAFT_1008at 1049.841 kb on - strand, within B158DRAFT_1008at 1049.849 kb on + strand, within B158DRAFT_1008at 1049.849 kb on + strand, within B158DRAFT_1008at 1049.857 kb on - strand, within B158DRAFT_1008at 1049.887 kb on - strand, within B158DRAFT_1008at 1049.914 kb on + strand, within B158DRAFT_1008at 1049.921 kb on - strand, within B158DRAFT_1008at 1049.922 kb on - strand, within B158DRAFT_1008

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml
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1,046,680 + B158DRAFT_1006 0.29 -0.7
1,046,680 + B158DRAFT_1006 0.29 +0.8
1,046,680 + B158DRAFT_1006 0.29 +1.6
1,046,688 - B158DRAFT_1006 0.30 -0.1
1,046,688 - B158DRAFT_1006 0.30 +2.7
1,046,716 - B158DRAFT_1006 0.33 +1.1
1,046,725 - B158DRAFT_1006 0.34 +0.9
1,046,772 + B158DRAFT_1006 0.39 +1.7
1,046,772 + B158DRAFT_1006 0.39 -1.1
1,046,772 + B158DRAFT_1006 0.39 -0.5
1,046,780 - B158DRAFT_1006 0.39 +1.3
1,046,780 - B158DRAFT_1006 0.39 -1.0
1,046,780 - B158DRAFT_1006 0.39 -0.3
1,046,780 - B158DRAFT_1006 0.39 -0.5
1,046,785 - B158DRAFT_1006 0.40 -0.2
1,046,786 + B158DRAFT_1006 0.40 +1.2
1,046,786 + B158DRAFT_1006 0.40 +2.1
1,046,786 + B158DRAFT_1006 0.40 +1.9
1,046,786 + B158DRAFT_1006 0.40 +2.3
1,046,786 + B158DRAFT_1006 0.40 +1.8
1,046,794 - B158DRAFT_1006 0.41 +1.5
1,046,831 - B158DRAFT_1006 0.45 +1.2
1,046,843 - B158DRAFT_1006 0.46 -0.9
1,046,901 + B158DRAFT_1006 0.52 -0.7
1,046,909 - B158DRAFT_1006 0.53 +0.6
1,046,909 - B158DRAFT_1006 0.53 +1.7
1,046,939 - B158DRAFT_1006 0.56 +0.1
1,046,945 + B158DRAFT_1006 0.57 +0.6
1,047,020 + B158DRAFT_1006 0.64 +0.4
1,047,028 - B158DRAFT_1006 0.65 +1.5
1,047,036 + B158DRAFT_1006 0.66 +0.6
1,047,044 - B158DRAFT_1006 0.67 +0.4
1,047,063 - B158DRAFT_1006 0.69 +3.1
1,047,128 + B158DRAFT_1006 0.76 +1.5
1,047,154 + B158DRAFT_1006 0.78 -0.1
1,047,189 + B158DRAFT_1006 0.82 +1.8
1,047,189 + B158DRAFT_1006 0.82 -0.0
1,047,189 + B158DRAFT_1006 0.82 +0.3
1,047,189 + B158DRAFT_1006 0.82 -0.4
1,047,197 - B158DRAFT_1006 0.83 -0.6
1,047,197 - B158DRAFT_1006 0.83 +0.8
1,047,227 + B158DRAFT_1006 0.86 +1.2
1,047,234 - B158DRAFT_1006 0.87 +1.8
1,047,245 - B158DRAFT_1006 0.88 -0.2
1,047,291 + -1.7
1,047,372 + -0.2
1,047,400 + +0.7
1,047,421 - -0.2
1,047,511 + +2.2
1,047,511 + -2.1
1,047,511 - +1.9
1,047,590 + -0.1
1,047,598 - +0.8
1,047,606 + +0.7
1,047,646 + -2.0
1,047,646 + +0.5
1,047,646 + -0.8
1,047,646 + -1.0
1,047,646 + -0.3
1,047,646 + +3.0
1,047,654 - -0.1
1,047,654 - +0.6
1,047,659 - -0.6
1,047,716 + -0.3
1,047,717 + -1.0
1,047,725 + -0.3
1,047,725 + -0.4
1,047,725 - -1.5
1,047,735 + -1.6
1,047,735 + +1.1
1,047,735 + -0.5
1,047,735 + -1.7
1,047,743 - B158DRAFT_1007 0.10 +0.1
1,047,743 - B158DRAFT_1007 0.10 +1.0
1,047,743 - B158DRAFT_1007 0.10 -2.0
1,047,743 - B158DRAFT_1007 0.10 +0.7
1,047,876 - B158DRAFT_1007 0.20 +1.8
1,047,882 + B158DRAFT_1007 0.21 -0.8
1,047,890 - B158DRAFT_1007 0.21 -0.4
1,047,905 + B158DRAFT_1007 0.22 -1.7
1,047,913 - B158DRAFT_1007 0.23 -1.0
1,047,956 + B158DRAFT_1007 0.26 +0.2
1,047,957 - B158DRAFT_1007 0.26 +0.7
1,047,967 + B158DRAFT_1007 0.27 -0.3
1,047,988 + B158DRAFT_1007 0.29 -2.7
1,047,996 + B158DRAFT_1007 0.29 -0.6
1,047,996 + B158DRAFT_1007 0.29 +0.3
1,048,004 - B158DRAFT_1007 0.30 -0.1
1,048,018 + B158DRAFT_1007 0.31 +1.1
1,048,208 + B158DRAFT_1007 0.45 -1.0
1,048,214 - B158DRAFT_1007 0.46 +0.6
1,048,214 - B158DRAFT_1007 0.46 -0.1
1,048,216 + B158DRAFT_1007 0.46 +0.5
1,048,219 - B158DRAFT_1007 0.46 +0.2
1,048,224 - B158DRAFT_1007 0.47 +0.6
1,048,224 - B158DRAFT_1007 0.47 -1.2
1,048,255 + B158DRAFT_1007 0.49 +0.0
1,048,255 + B158DRAFT_1007 0.49 -0.0
1,048,255 + B158DRAFT_1007 0.49 -0.1
1,048,304 + B158DRAFT_1007 0.53 +0.1
1,048,311 + B158DRAFT_1007 0.53 +0.9
1,048,319 - B158DRAFT_1007 0.54 +3.5
1,048,346 - B158DRAFT_1007 0.56 +0.5
1,048,366 + B158DRAFT_1007 0.57 -1.8
1,048,383 + B158DRAFT_1007 0.59 +0.9
1,048,383 + B158DRAFT_1007 0.59 +0.7
1,048,438 + B158DRAFT_1007 0.63 -1.3
1,048,438 + B158DRAFT_1007 0.63 +0.1
1,048,438 + B158DRAFT_1007 0.63 +0.5
1,048,438 + B158DRAFT_1007 0.63 +0.8
1,048,507 + B158DRAFT_1007 0.68 +0.1
1,048,507 + B158DRAFT_1007 0.68 -0.1
1,048,507 + B158DRAFT_1007 0.68 -0.8
1,048,507 - B158DRAFT_1007 0.68 +0.8
1,048,515 - B158DRAFT_1007 0.69 -1.4
1,048,560 - B158DRAFT_1007 0.72 -1.6
1,048,570 + B158DRAFT_1007 0.73 +0.1
1,048,575 + B158DRAFT_1007 0.73 -1.5
1,048,575 + B158DRAFT_1007 0.73 +1.8
1,048,583 - B158DRAFT_1007 0.74 -0.2
1,048,583 - B158DRAFT_1007 0.74 -1.4
1,048,583 - B158DRAFT_1007 0.74 -0.5
1,048,588 - B158DRAFT_1007 0.74 -1.1
1,048,632 - B158DRAFT_1007 0.77 +1.8
1,048,639 + B158DRAFT_1007 0.78 -0.4
1,048,645 + B158DRAFT_1007 0.78 -0.7
1,048,653 - B158DRAFT_1007 0.79 -0.8
1,048,765 - B158DRAFT_1007 0.88 -0.8
1,048,791 - B158DRAFT_1007 0.89 -1.2
1,048,824 - -0.6
1,048,840 - -0.9
1,048,840 - +0.3
1,048,913 + -0.1
1,048,914 + -2.2
1,049,004 + -1.1
1,049,077 + +0.7
1,049,077 + +3.0
1,049,077 + -0.1
1,049,077 + -0.2
1,049,085 - +1.4
1,049,101 + +0.6
1,049,144 + B158DRAFT_1008 0.10 -0.5
1,049,144 + B158DRAFT_1008 0.10 -0.3
1,049,144 + B158DRAFT_1008 0.10 -1.1
1,049,145 - B158DRAFT_1008 0.10 -0.5
1,049,152 - B158DRAFT_1008 0.10 -0.2
1,049,152 - B158DRAFT_1008 0.10 -0.9
1,049,169 - B158DRAFT_1008 0.11 -0.7
1,049,169 - B158DRAFT_1008 0.11 -0.6
1,049,169 - B158DRAFT_1008 0.11 +0.6
1,049,170 + B158DRAFT_1008 0.11 -0.4
1,049,172 + B158DRAFT_1008 0.11 -0.9
1,049,230 - B158DRAFT_1008 0.14 -2.0
1,049,230 - B158DRAFT_1008 0.14 -0.6
1,049,266 - B158DRAFT_1008 0.16 -1.9
1,049,278 + B158DRAFT_1008 0.16 -1.0
1,049,286 - B158DRAFT_1008 0.17 -0.4
1,049,387 - B158DRAFT_1008 0.21 -0.7
1,049,423 - B158DRAFT_1008 0.23 -0.6
1,049,449 + B158DRAFT_1008 0.24 -1.4
1,049,452 - B158DRAFT_1008 0.24 -0.5
1,049,457 - B158DRAFT_1008 0.25 -0.1
1,049,467 + B158DRAFT_1008 0.25 -2.6
1,049,535 + B158DRAFT_1008 0.28 -0.6
1,049,586 - B158DRAFT_1008 0.31 -0.2
1,049,593 + B158DRAFT_1008 0.31 +0.4
1,049,593 + B158DRAFT_1008 0.31 -1.5
1,049,601 - B158DRAFT_1008 0.31 -0.3
1,049,601 - B158DRAFT_1008 0.31 +1.2
1,049,601 - B158DRAFT_1008 0.31 +1.9
1,049,615 + B158DRAFT_1008 0.32 -0.7
1,049,623 - B158DRAFT_1008 0.32 -1.5
1,049,636 - B158DRAFT_1008 0.33 -2.2
1,049,750 + B158DRAFT_1008 0.38 +0.3
1,049,794 + B158DRAFT_1008 0.40 +0.2
1,049,794 + B158DRAFT_1008 0.40 -0.5
1,049,797 - B158DRAFT_1008 0.40 -1.8
1,049,833 + B158DRAFT_1008 0.42 -0.2
1,049,841 - B158DRAFT_1008 0.42 -1.5
1,049,849 + B158DRAFT_1008 0.43 -0.3
1,049,849 + B158DRAFT_1008 0.43 -0.4
1,049,857 - B158DRAFT_1008 0.43 -0.7
1,049,887 - B158DRAFT_1008 0.45 -3.0
1,049,914 + B158DRAFT_1008 0.46 -0.7
1,049,921 - B158DRAFT_1008 0.46 -0.7
1,049,922 - B158DRAFT_1008 0.46 +0.6

Or see this region's nucleotide sequence