Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0992

Experiment: m.b. Fusidic 0.00049 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0990 and B158DRAFT_0991 overlap by 8 nucleotidesB158DRAFT_0991 and B158DRAFT_0992 overlap by 4 nucleotidesB158DRAFT_0992 and B158DRAFT_0993 are separated by 30 nucleotidesB158DRAFT_0993 and B158DRAFT_0994 are separated by 354 nucleotides B158DRAFT_0990: B158DRAFT_0990 - Predicted transcriptional regulators, at 1,024,500 to 1,024,874 _0990 B158DRAFT_0991: B158DRAFT_0991 - ABC-type multidrug transport system, ATPase component, at 1,024,867 to 1,025,724 _0991 B158DRAFT_0992: B158DRAFT_0992 - hypothetical protein, at 1,025,721 to 1,026,677 _0992 B158DRAFT_0993: B158DRAFT_0993 - hypothetical protein, at 1,026,708 to 1,026,887 _0993 B158DRAFT_0994: B158DRAFT_0994 - putative adhesin (DUF1302) (from data), at 1,027,242 to 1,029,155 _0994 Position (kb) 1025 1026 1027Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1024.766 kb on + strand, within B158DRAFT_0990at 1024.766 kb on + strand, within B158DRAFT_0990at 1024.766 kb on + strand, within B158DRAFT_0990at 1024.766 kb on + strand, within B158DRAFT_0990at 1024.766 kb on - strand, within B158DRAFT_0990at 1024.774 kb on - strand, within B158DRAFT_0990at 1024.774 kb on - strand, within B158DRAFT_0990at 1024.774 kb on - strand, within B158DRAFT_0990at 1024.774 kb on - strand, within B158DRAFT_0990at 1024.774 kb on - strand, within B158DRAFT_0990at 1024.774 kb on - strand, within B158DRAFT_0990at 1024.774 kb on - strand, within B158DRAFT_0990at 1024.782 kb on - strand, within B158DRAFT_0990at 1024.783 kb on + strand, within B158DRAFT_0990at 1024.835 kb on + strand, within B158DRAFT_0990at 1024.844 kb on + strandat 1024.844 kb on + strandat 1024.852 kb on - strandat 1024.857 kb on - strandat 1024.859 kb on - strandat 1025.020 kb on + strand, within B158DRAFT_0991at 1025.021 kb on + strand, within B158DRAFT_0991at 1025.021 kb on + strand, within B158DRAFT_0991at 1025.021 kb on + strand, within B158DRAFT_0991at 1025.021 kb on + strand, within B158DRAFT_0991at 1025.029 kb on - strand, within B158DRAFT_0991at 1025.029 kb on - strand, within B158DRAFT_0991at 1025.065 kb on - strand, within B158DRAFT_0991at 1025.130 kb on - strand, within B158DRAFT_0991at 1025.135 kb on + strand, within B158DRAFT_0991at 1025.143 kb on - strand, within B158DRAFT_0991at 1025.159 kb on + strand, within B158DRAFT_0991at 1025.164 kb on + strand, within B158DRAFT_0991at 1025.167 kb on - strand, within B158DRAFT_0991at 1025.167 kb on - strand, within B158DRAFT_0991at 1025.179 kb on - strand, within B158DRAFT_0991at 1025.179 kb on - strand, within B158DRAFT_0991at 1025.189 kb on + strand, within B158DRAFT_0991at 1025.189 kb on + strand, within B158DRAFT_0991at 1025.189 kb on + strand, within B158DRAFT_0991at 1025.189 kb on + strand, within B158DRAFT_0991at 1025.190 kb on - strand, within B158DRAFT_0991at 1025.197 kb on - strand, within B158DRAFT_0991at 1025.197 kb on - strand, within B158DRAFT_0991at 1025.197 kb on - strand, within B158DRAFT_0991at 1025.197 kb on - strand, within B158DRAFT_0991at 1025.197 kb on - strand, within B158DRAFT_0991at 1025.197 kb on - strand, within B158DRAFT_0991at 1025.197 kb on - strand, within B158DRAFT_0991at 1025.252 kb on - strand, within B158DRAFT_0991at 1025.281 kb on + strand, within B158DRAFT_0991at 1025.287 kb on + strand, within B158DRAFT_0991at 1025.287 kb on + strand, within B158DRAFT_0991at 1025.287 kb on + strand, within B158DRAFT_0991at 1025.287 kb on + strand, within B158DRAFT_0991at 1025.294 kb on - strand, within B158DRAFT_0991at 1025.295 kb on - strand, within B158DRAFT_0991at 1025.295 kb on - strand, within B158DRAFT_0991at 1025.330 kb on + strand, within B158DRAFT_0991at 1025.344 kb on - strand, within B158DRAFT_0991at 1025.366 kb on - strand, within B158DRAFT_0991at 1025.560 kb on - strand, within B158DRAFT_0991at 1025.560 kb on - strand, within B158DRAFT_0991at 1025.622 kb on + strand, within B158DRAFT_0991at 1025.630 kb on - strand, within B158DRAFT_0991at 1025.630 kb on - strand, within B158DRAFT_0991at 1025.638 kb on - strand, within B158DRAFT_0991at 1025.649 kb on - strandat 1025.728 kb on - strandat 1025.730 kb on + strandat 1025.730 kb on + strandat 1025.730 kb on + strandat 1025.738 kb on - strandat 1025.780 kb on - strandat 1025.780 kb on - strandat 1025.813 kb on + strandat 1025.838 kb on + strand, within B158DRAFT_0992at 1025.856 kb on + strand, within B158DRAFT_0992at 1025.861 kb on + strand, within B158DRAFT_0992at 1025.869 kb on - strand, within B158DRAFT_0992at 1025.878 kb on + strand, within B158DRAFT_0992at 1025.917 kb on + strand, within B158DRAFT_0992at 1025.917 kb on + strand, within B158DRAFT_0992at 1025.925 kb on - strand, within B158DRAFT_0992at 1025.925 kb on - strand, within B158DRAFT_0992at 1025.925 kb on - strand, within B158DRAFT_0992at 1025.925 kb on - strand, within B158DRAFT_0992at 1025.925 kb on - strand, within B158DRAFT_0992at 1025.925 kb on - strand, within B158DRAFT_0992at 1025.925 kb on - strand, within B158DRAFT_0992at 1025.932 kb on - strand, within B158DRAFT_0992at 1025.954 kb on - strand, within B158DRAFT_0992at 1026.159 kb on - strand, within B158DRAFT_0992at 1026.166 kb on - strand, within B158DRAFT_0992at 1026.210 kb on - strand, within B158DRAFT_0992at 1026.288 kb on - strand, within B158DRAFT_0992at 1026.296 kb on + strand, within B158DRAFT_0992at 1026.296 kb on + strand, within B158DRAFT_0992at 1026.296 kb on + strand, within B158DRAFT_0992at 1026.296 kb on + strand, within B158DRAFT_0992at 1026.296 kb on + strand, within B158DRAFT_0992at 1026.304 kb on - strand, within B158DRAFT_0992at 1026.304 kb on - strand, within B158DRAFT_0992at 1026.304 kb on - strand, within B158DRAFT_0992at 1026.309 kb on - strand, within B158DRAFT_0992at 1026.413 kb on + strand, within B158DRAFT_0992at 1026.415 kb on + strand, within B158DRAFT_0992at 1026.421 kb on - strand, within B158DRAFT_0992at 1026.432 kb on + strand, within B158DRAFT_0992at 1026.440 kb on - strand, within B158DRAFT_0992at 1026.461 kb on + strand, within B158DRAFT_0992at 1026.471 kb on + strand, within B158DRAFT_0992at 1026.479 kb on - strand, within B158DRAFT_0992at 1026.479 kb on - strand, within B158DRAFT_0992at 1026.479 kb on - strand, within B158DRAFT_0992at 1026.479 kb on - strand, within B158DRAFT_0992at 1026.551 kb on + strand, within B158DRAFT_0992at 1026.559 kb on - strand, within B158DRAFT_0992at 1026.561 kb on + strand, within B158DRAFT_0992at 1026.569 kb on - strand, within B158DRAFT_0992at 1026.602 kb on - strandat 1026.625 kb on + strandat 1026.647 kb on + strandat 1026.647 kb on + strandat 1026.647 kb on + strandat 1026.655 kb on - strandat 1026.680 kb on - strandat 1026.690 kb on + strandat 1026.697 kb on + strandat 1026.745 kb on + strand, within B158DRAFT_0993at 1026.782 kb on - strand, within B158DRAFT_0993at 1026.784 kb on - strand, within B158DRAFT_0993at 1026.825 kb on + strand, within B158DRAFT_0993at 1026.836 kb on + strand, within B158DRAFT_0993at 1026.857 kb on + strand, within B158DRAFT_0993at 1026.935 kb on + strandat 1026.943 kb on - strandat 1026.996 kb on - strandat 1027.013 kb on + strandat 1027.075 kb on + strandat 1027.204 kb on - strandat 1027.254 kb on + strandat 1027.262 kb on - strandat 1027.262 kb on - strandat 1027.262 kb on - strandat 1027.342 kb on - strandat 1027.444 kb on + strand, within B158DRAFT_0994at 1027.508 kb on + strand, within B158DRAFT_0994at 1027.530 kb on - strand, within B158DRAFT_0994at 1027.530 kb on - strand, within B158DRAFT_0994at 1027.536 kb on + strand, within B158DRAFT_0994at 1027.536 kb on + strand, within B158DRAFT_0994at 1027.631 kb on + strand, within B158DRAFT_0994at 1027.631 kb on + strand, within B158DRAFT_0994at 1027.631 kb on + strand, within B158DRAFT_0994at 1027.648 kb on + strand, within B158DRAFT_0994at 1027.648 kb on + strand, within B158DRAFT_0994at 1027.648 kb on + strand, within B158DRAFT_0994

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml
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1,024,766 + B158DRAFT_0990 0.71 +3.0
1,024,766 + B158DRAFT_0990 0.71 -3.0
1,024,766 + B158DRAFT_0990 0.71 -1.5
1,024,766 + B158DRAFT_0990 0.71 +0.0
1,024,766 - B158DRAFT_0990 0.71 -1.7
1,024,774 - B158DRAFT_0990 0.73 -0.0
1,024,774 - B158DRAFT_0990 0.73 -1.5
1,024,774 - B158DRAFT_0990 0.73 -1.5
1,024,774 - B158DRAFT_0990 0.73 -0.1
1,024,774 - B158DRAFT_0990 0.73 -0.1
1,024,774 - B158DRAFT_0990 0.73 -1.8
1,024,774 - B158DRAFT_0990 0.73 -1.6
1,024,782 - B158DRAFT_0990 0.75 -0.6
1,024,783 + B158DRAFT_0990 0.75 -1.1
1,024,835 + B158DRAFT_0990 0.89 -0.5
1,024,844 + +0.4
1,024,844 + -0.6
1,024,852 - -0.8
1,024,857 - -0.5
1,024,859 - -1.4
1,025,020 + B158DRAFT_0991 0.18 -2.5
1,025,021 + B158DRAFT_0991 0.18 -0.9
1,025,021 + B158DRAFT_0991 0.18 +1.7
1,025,021 + B158DRAFT_0991 0.18 +0.2
1,025,021 + B158DRAFT_0991 0.18 -0.7
1,025,029 - B158DRAFT_0991 0.19 +0.3
1,025,029 - B158DRAFT_0991 0.19 -1.3
1,025,065 - B158DRAFT_0991 0.23 -0.1
1,025,130 - B158DRAFT_0991 0.31 -0.7
1,025,135 + B158DRAFT_0991 0.31 -1.2
1,025,143 - B158DRAFT_0991 0.32 -1.9
1,025,159 + B158DRAFT_0991 0.34 -0.9
1,025,164 + B158DRAFT_0991 0.35 -0.6
1,025,167 - B158DRAFT_0991 0.35 -0.9
1,025,167 - B158DRAFT_0991 0.35 -1.9
1,025,179 - B158DRAFT_0991 0.36 -0.8
1,025,179 - B158DRAFT_0991 0.36 -0.0
1,025,189 + B158DRAFT_0991 0.38 -0.8
1,025,189 + B158DRAFT_0991 0.38 +0.1
1,025,189 + B158DRAFT_0991 0.38 -1.1
1,025,189 + B158DRAFT_0991 0.38 -0.3
1,025,190 - B158DRAFT_0991 0.38 -3.6
1,025,197 - B158DRAFT_0991 0.38 -0.5
1,025,197 - B158DRAFT_0991 0.38 +0.2
1,025,197 - B158DRAFT_0991 0.38 +1.6
1,025,197 - B158DRAFT_0991 0.38 -0.0
1,025,197 - B158DRAFT_0991 0.38 -1.2
1,025,197 - B158DRAFT_0991 0.38 -0.4
1,025,197 - B158DRAFT_0991 0.38 -1.0
1,025,252 - B158DRAFT_0991 0.45 +0.1
1,025,281 + B158DRAFT_0991 0.48 -0.4
1,025,287 + B158DRAFT_0991 0.49 -1.7
1,025,287 + B158DRAFT_0991 0.49 -1.3
1,025,287 + B158DRAFT_0991 0.49 +0.2
1,025,287 + B158DRAFT_0991 0.49 -0.3
1,025,294 - B158DRAFT_0991 0.50 -0.4
1,025,295 - B158DRAFT_0991 0.50 -0.3
1,025,295 - B158DRAFT_0991 0.50 +0.5
1,025,330 + B158DRAFT_0991 0.54 -2.5
1,025,344 - B158DRAFT_0991 0.56 -0.9
1,025,366 - B158DRAFT_0991 0.58 +0.7
1,025,560 - B158DRAFT_0991 0.81 -0.1
1,025,560 - B158DRAFT_0991 0.81 -0.7
1,025,622 + B158DRAFT_0991 0.88 -0.1
1,025,630 - B158DRAFT_0991 0.89 +0.9
1,025,630 - B158DRAFT_0991 0.89 +0.5
1,025,638 - B158DRAFT_0991 0.90 +0.4
1,025,649 - -0.3
1,025,728 - -2.2
1,025,730 + -1.4
1,025,730 + -1.1
1,025,730 + -3.8
1,025,738 - -0.5
1,025,780 - -1.0
1,025,780 - -0.6
1,025,813 + -1.0
1,025,838 + B158DRAFT_0992 0.12 +3.5
1,025,856 + B158DRAFT_0992 0.14 +0.3
1,025,861 + B158DRAFT_0992 0.15 -0.2
1,025,869 - B158DRAFT_0992 0.15 -0.6
1,025,878 + B158DRAFT_0992 0.16 -0.1
1,025,917 + B158DRAFT_0992 0.20 -0.2
1,025,917 + B158DRAFT_0992 0.20 +3.3
1,025,925 - B158DRAFT_0992 0.21 +0.9
1,025,925 - B158DRAFT_0992 0.21 -0.9
1,025,925 - B158DRAFT_0992 0.21 -1.6
1,025,925 - B158DRAFT_0992 0.21 +0.6
1,025,925 - B158DRAFT_0992 0.21 +0.0
1,025,925 - B158DRAFT_0992 0.21 -0.7
1,025,925 - B158DRAFT_0992 0.21 -0.9
1,025,932 - B158DRAFT_0992 0.22 -1.5
1,025,954 - B158DRAFT_0992 0.24 +0.3
1,026,159 - B158DRAFT_0992 0.46 +0.6
1,026,166 - B158DRAFT_0992 0.46 -1.5
1,026,210 - B158DRAFT_0992 0.51 -1.1
1,026,288 - B158DRAFT_0992 0.59 -3.1
1,026,296 + B158DRAFT_0992 0.60 -1.3
1,026,296 + B158DRAFT_0992 0.60 -1.9
1,026,296 + B158DRAFT_0992 0.60 -1.7
1,026,296 + B158DRAFT_0992 0.60 -0.7
1,026,296 + B158DRAFT_0992 0.60 +1.2
1,026,304 - B158DRAFT_0992 0.61 +0.3
1,026,304 - B158DRAFT_0992 0.61 -0.3
1,026,304 - B158DRAFT_0992 0.61 +0.6
1,026,309 - B158DRAFT_0992 0.61 -1.6
1,026,413 + B158DRAFT_0992 0.72 -0.1
1,026,415 + B158DRAFT_0992 0.73 +1.4
1,026,421 - B158DRAFT_0992 0.73 -0.2
1,026,432 + B158DRAFT_0992 0.74 -1.1
1,026,440 - B158DRAFT_0992 0.75 -1.0
1,026,461 + B158DRAFT_0992 0.77 -1.5
1,026,471 + B158DRAFT_0992 0.78 -2.0
1,026,479 - B158DRAFT_0992 0.79 -0.7
1,026,479 - B158DRAFT_0992 0.79 -0.2
1,026,479 - B158DRAFT_0992 0.79 -0.5
1,026,479 - B158DRAFT_0992 0.79 +0.1
1,026,551 + B158DRAFT_0992 0.87 -1.2
1,026,559 - B158DRAFT_0992 0.88 -0.4
1,026,561 + B158DRAFT_0992 0.88 -1.6
1,026,569 - B158DRAFT_0992 0.89 -2.1
1,026,602 - -1.8
1,026,625 + -1.3
1,026,647 + -0.6
1,026,647 + -0.5
1,026,647 + -0.7
1,026,655 - +0.6
1,026,680 - -0.4
1,026,690 + -0.8
1,026,697 + -0.8
1,026,745 + B158DRAFT_0993 0.21 -0.6
1,026,782 - B158DRAFT_0993 0.41 -0.9
1,026,784 - B158DRAFT_0993 0.42 -0.9
1,026,825 + B158DRAFT_0993 0.65 -0.3
1,026,836 + B158DRAFT_0993 0.71 -0.2
1,026,857 + B158DRAFT_0993 0.83 -0.7
1,026,935 + -0.8
1,026,943 - -1.0
1,026,996 - +0.4
1,027,013 + -0.4
1,027,075 + +0.2
1,027,204 - -1.5
1,027,254 + -1.6
1,027,262 - -2.4
1,027,262 - -0.4
1,027,262 - -0.9
1,027,342 - -1.4
1,027,444 + B158DRAFT_0994 0.11 -0.1
1,027,508 + B158DRAFT_0994 0.14 -0.1
1,027,530 - B158DRAFT_0994 0.15 -1.3
1,027,530 - B158DRAFT_0994 0.15 +0.1
1,027,536 + B158DRAFT_0994 0.15 -1.4
1,027,536 + B158DRAFT_0994 0.15 +0.4
1,027,631 + B158DRAFT_0994 0.20 -0.3
1,027,631 + B158DRAFT_0994 0.20 -1.3
1,027,631 + B158DRAFT_0994 0.20 -1.6
1,027,648 + B158DRAFT_0994 0.21 -0.2
1,027,648 + B158DRAFT_0994 0.21 -1.9
1,027,648 + B158DRAFT_0994 0.21 -0.0

Or see this region's nucleotide sequence