Experiment: m.b. Fusidic 0.00049 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0954 and B158DRAFT_0955 are separated by 1 nucleotides B158DRAFT_0955 and B158DRAFT_0956 are separated by 385 nucleotides
B158DRAFT_0954: B158DRAFT_0954 - diguanylate cyclase (GGDEF) domain, at 982,363 to 983,769
_0954
B158DRAFT_0955: B158DRAFT_0955 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 983,771 to 986,338
_0955
B158DRAFT_0956: B158DRAFT_0956 - dissimilatory nitrite reductase (NO-forming), copper type apoprotein, at 986,724 to 988,136
_0956
Position (kb) 983
984
985
986
987 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 982.792 kb on - strand, within B158DRAFT_0954 at 982.802 kb on - strand, within B158DRAFT_0954 at 982.807 kb on + strand, within B158DRAFT_0954 at 982.807 kb on + strand, within B158DRAFT_0954 at 982.807 kb on + strand, within B158DRAFT_0954 at 982.807 kb on + strand, within B158DRAFT_0954 at 982.937 kb on - strand, within B158DRAFT_0954 at 982.972 kb on + strand, within B158DRAFT_0954 at 983.004 kb on + strand, within B158DRAFT_0954 at 983.009 kb on + strand, within B158DRAFT_0954 at 983.009 kb on + strand, within B158DRAFT_0954 at 983.009 kb on + strand, within B158DRAFT_0954 at 983.009 kb on + strand, within B158DRAFT_0954 at 983.017 kb on - strand, within B158DRAFT_0954 at 983.017 kb on - strand, within B158DRAFT_0954 at 983.017 kb on - strand, within B158DRAFT_0954 at 983.027 kb on - strand, within B158DRAFT_0954 at 983.064 kb on - strand, within B158DRAFT_0954 at 983.082 kb on - strand, within B158DRAFT_0954 at 983.116 kb on - strand, within B158DRAFT_0954 at 983.227 kb on + strand, within B158DRAFT_0954 at 983.285 kb on - strand, within B158DRAFT_0954 at 983.638 kb on - strand at 983.644 kb on - strand at 983.652 kb on + strand at 983.652 kb on + strand at 983.654 kb on - strand at 983.660 kb on - strand at 983.710 kb on + strand at 983.783 kb on + strand at 984.015 kb on + strand at 984.154 kb on - strand, within B158DRAFT_0955 at 984.154 kb on - strand, within B158DRAFT_0955 at 984.154 kb on - strand, within B158DRAFT_0955 at 984.156 kb on + strand, within B158DRAFT_0955 at 984.164 kb on - strand, within B158DRAFT_0955 at 984.172 kb on + strand, within B158DRAFT_0955 at 984.172 kb on + strand, within B158DRAFT_0955 at 984.180 kb on - strand, within B158DRAFT_0955 at 984.207 kb on - strand, within B158DRAFT_0955 at 984.255 kb on + strand, within B158DRAFT_0955 at 984.308 kb on - strand, within B158DRAFT_0955 at 984.309 kb on - strand, within B158DRAFT_0955 at 984.310 kb on - strand, within B158DRAFT_0955 at 984.310 kb on - strand, within B158DRAFT_0955 at 984.515 kb on + strand, within B158DRAFT_0955 at 984.522 kb on + strand, within B158DRAFT_0955 at 984.534 kb on + strand, within B158DRAFT_0955 at 984.566 kb on - strand, within B158DRAFT_0955 at 984.663 kb on + strand, within B158DRAFT_0955 at 984.752 kb on + strand, within B158DRAFT_0955 at 984.752 kb on + strand, within B158DRAFT_0955 at 984.756 kb on + strand, within B158DRAFT_0955 at 984.809 kb on - strand, within B158DRAFT_0955 at 984.817 kb on - strand, within B158DRAFT_0955 at 984.858 kb on + strand, within B158DRAFT_0955 at 984.866 kb on - strand, within B158DRAFT_0955 at 984.866 kb on - strand, within B158DRAFT_0955 at 984.866 kb on - strand, within B158DRAFT_0955 at 985.061 kb on + strand, within B158DRAFT_0955 at 985.061 kb on + strand, within B158DRAFT_0955 at 985.071 kb on + strand, within B158DRAFT_0955 at 985.298 kb on - strand, within B158DRAFT_0955 at 985.395 kb on + strand, within B158DRAFT_0955 at 985.395 kb on - strand, within B158DRAFT_0955 at 985.403 kb on - strand, within B158DRAFT_0955 at 985.403 kb on - strand, within B158DRAFT_0955 at 985.453 kb on + strand, within B158DRAFT_0955 at 985.592 kb on + strand, within B158DRAFT_0955 at 985.658 kb on - strand, within B158DRAFT_0955 at 985.658 kb on - strand, within B158DRAFT_0955 at 985.658 kb on - strand, within B158DRAFT_0955 at 985.658 kb on - strand, within B158DRAFT_0955 at 985.690 kb on - strand, within B158DRAFT_0955 at 985.756 kb on - strand, within B158DRAFT_0955 at 985.811 kb on + strand, within B158DRAFT_0955 at 985.811 kb on + strand, within B158DRAFT_0955 at 985.827 kb on - strand, within B158DRAFT_0955 at 985.836 kb on - strand, within B158DRAFT_0955 at 985.855 kb on + strand, within B158DRAFT_0955 at 985.900 kb on + strand, within B158DRAFT_0955 at 985.908 kb on - strand, within B158DRAFT_0955 at 986.020 kb on + strand, within B158DRAFT_0955 at 986.025 kb on + strand, within B158DRAFT_0955 at 986.032 kb on - strand, within B158DRAFT_0955 at 986.079 kb on - strand, within B158DRAFT_0955 at 986.109 kb on - strand at 986.138 kb on - strand at 986.197 kb on + strand at 986.203 kb on - strand at 986.205 kb on - strand at 986.217 kb on + strand at 986.252 kb on + strand at 986.252 kb on + strand at 986.260 kb on - strand at 986.281 kb on + strand at 986.281 kb on + strand at 986.478 kb on - strand at 986.657 kb on - strand at 986.726 kb on - strand at 986.769 kb on + strand at 986.777 kb on - strand at 986.783 kb on + strand at 986.844 kb on - strand at 986.872 kb on + strand, within B158DRAFT_0956 at 986.899 kb on - strand, within B158DRAFT_0956 at 986.917 kb on - strand, within B158DRAFT_0956 at 986.939 kb on - strand, within B158DRAFT_0956 at 986.964 kb on + strand, within B158DRAFT_0956 at 986.964 kb on + strand, within B158DRAFT_0956 at 986.964 kb on + strand, within B158DRAFT_0956 at 986.964 kb on + strand, within B158DRAFT_0956 at 986.964 kb on + strand, within B158DRAFT_0956 at 986.964 kb on + strand, within B158DRAFT_0956 at 986.964 kb on + strand, within B158DRAFT_0956 at 986.964 kb on + strand, within B158DRAFT_0956 at 986.964 kb on + strand, within B158DRAFT_0956 at 986.964 kb on + strand, within B158DRAFT_0956 at 986.964 kb on + strand, within B158DRAFT_0956 at 986.964 kb on + strand, within B158DRAFT_0956 at 986.972 kb on - strand, within B158DRAFT_0956 at 986.972 kb on - strand, within B158DRAFT_0956 at 986.972 kb on - strand, within B158DRAFT_0956 at 986.972 kb on - strand, within B158DRAFT_0956 at 986.972 kb on - strand, within B158DRAFT_0956 at 986.972 kb on - strand, within B158DRAFT_0956 at 986.972 kb on - strand, within B158DRAFT_0956 at 986.972 kb on - strand, within B158DRAFT_0956 at 986.972 kb on - strand, within B158DRAFT_0956 at 986.972 kb on - strand, within B158DRAFT_0956 at 987.070 kb on - strand, within B158DRAFT_0956 at 987.072 kb on - strand, within B158DRAFT_0956 at 987.138 kb on + strand, within B158DRAFT_0956 at 987.146 kb on - strand, within B158DRAFT_0956 at 987.167 kb on - strand, within B158DRAFT_0956 at 987.186 kb on + strand, within B158DRAFT_0956 at 987.186 kb on + strand, within B158DRAFT_0956 at 987.268 kb on + strand, within B158DRAFT_0956 at 987.317 kb on - strand, within B158DRAFT_0956
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml remove 982,792 - B158DRAFT_0954 0.30 -0.8 982,802 - B158DRAFT_0954 0.31 +2.0 982,807 + B158DRAFT_0954 0.32 +0.4 982,807 + B158DRAFT_0954 0.32 +0.5 982,807 + B158DRAFT_0954 0.32 -0.4 982,807 + B158DRAFT_0954 0.32 -1.0 982,937 - B158DRAFT_0954 0.41 -2.2 982,972 + B158DRAFT_0954 0.43 -1.4 983,004 + B158DRAFT_0954 0.46 +1.1 983,009 + B158DRAFT_0954 0.46 -0.1 983,009 + B158DRAFT_0954 0.46 -0.1 983,009 + B158DRAFT_0954 0.46 -1.2 983,009 + B158DRAFT_0954 0.46 -1.6 983,017 - B158DRAFT_0954 0.46 +0.3 983,017 - B158DRAFT_0954 0.46 -2.8 983,017 - B158DRAFT_0954 0.46 -0.8 983,027 - B158DRAFT_0954 0.47 -0.1 983,064 - B158DRAFT_0954 0.50 -0.7 983,082 - B158DRAFT_0954 0.51 -0.1 983,116 - B158DRAFT_0954 0.54 -0.1 983,227 + B158DRAFT_0954 0.61 -1.7 983,285 - B158DRAFT_0954 0.66 +0.4 983,638 - +0.2 983,644 - -1.4 983,652 + -0.1 983,652 + -0.1 983,654 - -0.8 983,660 - -1.9 983,710 + -0.5 983,783 + +0.6 984,015 + +0.9 984,154 - B158DRAFT_0955 0.15 +0.5 984,154 - B158DRAFT_0955 0.15 +0.2 984,154 - B158DRAFT_0955 0.15 -0.8 984,156 + B158DRAFT_0955 0.15 +0.4 984,164 - B158DRAFT_0955 0.15 -0.1 984,172 + B158DRAFT_0955 0.16 -2.2 984,172 + B158DRAFT_0955 0.16 +3.1 984,180 - B158DRAFT_0955 0.16 -0.8 984,207 - B158DRAFT_0955 0.17 -0.4 984,255 + B158DRAFT_0955 0.19 +0.5 984,308 - B158DRAFT_0955 0.21 +0.8 984,309 - B158DRAFT_0955 0.21 +0.6 984,310 - B158DRAFT_0955 0.21 -0.3 984,310 - B158DRAFT_0955 0.21 -1.7 984,515 + B158DRAFT_0955 0.29 -1.0 984,522 + B158DRAFT_0955 0.29 +0.0 984,534 + B158DRAFT_0955 0.30 +0.8 984,566 - B158DRAFT_0955 0.31 -1.8 984,663 + B158DRAFT_0955 0.35 -0.5 984,752 + B158DRAFT_0955 0.38 -0.5 984,752 + B158DRAFT_0955 0.38 -3.5 984,756 + B158DRAFT_0955 0.38 -0.2 984,809 - B158DRAFT_0955 0.40 -0.4 984,817 - B158DRAFT_0955 0.41 -2.2 984,858 + B158DRAFT_0955 0.42 -1.2 984,866 - B158DRAFT_0955 0.43 -0.7 984,866 - B158DRAFT_0955 0.43 -1.1 984,866 - B158DRAFT_0955 0.43 -0.2 985,061 + B158DRAFT_0955 0.50 +2.4 985,061 + B158DRAFT_0955 0.50 -0.6 985,071 + B158DRAFT_0955 0.51 -0.1 985,298 - B158DRAFT_0955 0.59 -0.6 985,395 + B158DRAFT_0955 0.63 +0.3 985,395 - B158DRAFT_0955 0.63 -2.0 985,403 - B158DRAFT_0955 0.64 +0.5 985,403 - B158DRAFT_0955 0.64 +0.3 985,453 + B158DRAFT_0955 0.65 -0.3 985,592 + B158DRAFT_0955 0.71 -0.8 985,658 - B158DRAFT_0955 0.73 -1.0 985,658 - B158DRAFT_0955 0.73 -0.3 985,658 - B158DRAFT_0955 0.73 -0.1 985,658 - B158DRAFT_0955 0.73 +2.2 985,690 - B158DRAFT_0955 0.75 -0.7 985,756 - B158DRAFT_0955 0.77 +0.4 985,811 + B158DRAFT_0955 0.79 -0.6 985,811 + B158DRAFT_0955 0.79 -0.7 985,827 - B158DRAFT_0955 0.80 -1.9 985,836 - B158DRAFT_0955 0.80 -0.7 985,855 + B158DRAFT_0955 0.81 -2.6 985,900 + B158DRAFT_0955 0.83 -2.7 985,908 - B158DRAFT_0955 0.83 +0.6 986,020 + B158DRAFT_0955 0.88 -0.4 986,025 + B158DRAFT_0955 0.88 +0.4 986,032 - B158DRAFT_0955 0.88 -0.1 986,079 - B158DRAFT_0955 0.90 -1.4 986,109 - -0.1 986,138 - +1.2 986,197 + -0.8 986,203 - -1.4 986,205 - -0.3 986,217 + +1.5 986,252 + -0.5 986,252 + -1.2 986,260 - -0.1 986,281 + +2.2 986,281 + -1.1 986,478 - +1.4 986,657 - -1.1 986,726 - -1.1 986,769 + -0.4 986,777 - -0.4 986,783 + -1.3 986,844 - -0.6 986,872 + B158DRAFT_0956 0.10 -0.0 986,899 - B158DRAFT_0956 0.12 +0.7 986,917 - B158DRAFT_0956 0.14 -1.2 986,939 - B158DRAFT_0956 0.15 -0.3 986,964 + B158DRAFT_0956 0.17 +0.0 986,964 + B158DRAFT_0956 0.17 -0.5 986,964 + B158DRAFT_0956 0.17 -0.5 986,964 + B158DRAFT_0956 0.17 -0.8 986,964 + B158DRAFT_0956 0.17 -1.4 986,964 + B158DRAFT_0956 0.17 -1.1 986,964 + B158DRAFT_0956 0.17 -0.5 986,964 + B158DRAFT_0956 0.17 -1.5 986,964 + B158DRAFT_0956 0.17 -1.2 986,964 + B158DRAFT_0956 0.17 -1.0 986,964 + B158DRAFT_0956 0.17 -0.7 986,964 + B158DRAFT_0956 0.17 -2.1 986,972 - B158DRAFT_0956 0.18 +0.6 986,972 - B158DRAFT_0956 0.18 -1.2 986,972 - B158DRAFT_0956 0.18 -0.9 986,972 - B158DRAFT_0956 0.18 +0.8 986,972 - B158DRAFT_0956 0.18 -1.4 986,972 - B158DRAFT_0956 0.18 -0.1 986,972 - B158DRAFT_0956 0.18 -1.8 986,972 - B158DRAFT_0956 0.18 +0.7 986,972 - B158DRAFT_0956 0.18 +0.9 986,972 - B158DRAFT_0956 0.18 -1.9 987,070 - B158DRAFT_0956 0.24 +0.8 987,072 - B158DRAFT_0956 0.25 -2.1 987,138 + B158DRAFT_0956 0.29 -0.2 987,146 - B158DRAFT_0956 0.30 +0.4 987,167 - B158DRAFT_0956 0.31 -0.9 987,186 + B158DRAFT_0956 0.33 +0.5 987,186 + B158DRAFT_0956 0.33 -0.5 987,268 + B158DRAFT_0956 0.38 -0.8 987,317 - B158DRAFT_0956 0.42 +0.2
Or see this region's nucleotide sequence