Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0898

Experiment: m.b. Fusidic 0.00049 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0896 and B158DRAFT_0897 are separated by 139 nucleotidesB158DRAFT_0897 and B158DRAFT_0898 are separated by 80 nucleotidesB158DRAFT_0898 and B158DRAFT_0899 are separated by 37 nucleotides B158DRAFT_0896: B158DRAFT_0896 - phosphate regulon sensor kinase PhoR, at 917,616 to 918,905 _0896 B158DRAFT_0897: B158DRAFT_0897 - hypothetical protein, at 919,045 to 919,365 _0897 B158DRAFT_0898: B158DRAFT_0898 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 919,446 to 920,663 _0898 B158DRAFT_0899: B158DRAFT_0899 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60), at 920,701 to 921,225 _0899 Position (kb) 919 920 921Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 918.588 kb on + strand, within B158DRAFT_0896at 918.632 kb on - strand, within B158DRAFT_0896at 918.700 kb on - strand, within B158DRAFT_0896at 918.700 kb on - strand, within B158DRAFT_0896at 918.700 kb on - strand, within B158DRAFT_0896at 918.740 kb on + strand, within B158DRAFT_0896at 918.779 kb on + strandat 918.795 kb on + strandat 918.814 kb on - strandat 918.825 kb on - strandat 918.873 kb on + strandat 918.881 kb on - strandat 918.906 kb on + strandat 918.980 kb on + strandat 918.988 kb on - strandat 919.033 kb on - strandat 919.213 kb on - strand, within B158DRAFT_0897at 919.246 kb on + strand, within B158DRAFT_0897at 919.246 kb on + strand, within B158DRAFT_0897at 919.246 kb on + strand, within B158DRAFT_0897at 919.254 kb on - strand, within B158DRAFT_0897at 919.286 kb on - strand, within B158DRAFT_0897at 919.297 kb on + strand, within B158DRAFT_0897at 919.305 kb on - strand, within B158DRAFT_0897at 919.334 kb on - strandat 919.479 kb on - strandat 919.486 kb on - strandat 919.542 kb on + strandat 919.542 kb on + strandat 919.542 kb on + strandat 919.646 kb on + strand, within B158DRAFT_0898at 919.652 kb on + strand, within B158DRAFT_0898at 919.717 kb on - strand, within B158DRAFT_0898at 919.760 kb on + strand, within B158DRAFT_0898at 919.765 kb on + strand, within B158DRAFT_0898at 919.773 kb on - strand, within B158DRAFT_0898at 919.801 kb on + strand, within B158DRAFT_0898at 919.874 kb on + strand, within B158DRAFT_0898at 919.882 kb on - strand, within B158DRAFT_0898at 919.927 kb on + strand, within B158DRAFT_0898at 919.948 kb on + strand, within B158DRAFT_0898at 919.956 kb on - strand, within B158DRAFT_0898at 920.012 kb on - strand, within B158DRAFT_0898at 920.205 kb on - strand, within B158DRAFT_0898at 920.238 kb on + strand, within B158DRAFT_0898at 920.242 kb on + strand, within B158DRAFT_0898at 920.253 kb on + strand, within B158DRAFT_0898at 920.256 kb on - strand, within B158DRAFT_0898at 920.371 kb on + strand, within B158DRAFT_0898at 920.405 kb on - strand, within B158DRAFT_0898at 920.405 kb on - strand, within B158DRAFT_0898at 920.405 kb on - strand, within B158DRAFT_0898at 920.421 kb on - strand, within B158DRAFT_0898at 920.439 kb on + strand, within B158DRAFT_0898at 920.439 kb on + strand, within B158DRAFT_0898at 920.439 kb on + strand, within B158DRAFT_0898at 920.447 kb on - strand, within B158DRAFT_0898at 920.447 kb on - strand, within B158DRAFT_0898at 920.529 kb on + strand, within B158DRAFT_0898at 920.529 kb on + strand, within B158DRAFT_0898at 920.529 kb on + strand, within B158DRAFT_0898at 920.529 kb on + strand, within B158DRAFT_0898at 920.537 kb on - strand, within B158DRAFT_0898at 920.537 kb on - strand, within B158DRAFT_0898at 920.634 kb on + strandat 920.642 kb on - strandat 920.734 kb on + strandat 920.750 kb on + strandat 920.750 kb on + strandat 920.750 kb on + strandat 920.750 kb on + strandat 920.750 kb on + strandat 920.750 kb on + strandat 920.750 kb on + strandat 920.752 kb on + strandat 920.752 kb on + strandat 920.758 kb on - strand, within B158DRAFT_0899at 920.758 kb on - strand, within B158DRAFT_0899at 920.758 kb on - strand, within B158DRAFT_0899at 920.758 kb on - strand, within B158DRAFT_0899at 920.758 kb on - strand, within B158DRAFT_0899at 920.758 kb on - strand, within B158DRAFT_0899at 920.758 kb on - strand, within B158DRAFT_0899at 920.758 kb on - strand, within B158DRAFT_0899at 920.860 kb on + strand, within B158DRAFT_0899at 920.868 kb on - strand, within B158DRAFT_0899at 920.889 kb on + strand, within B158DRAFT_0899at 920.908 kb on + strand, within B158DRAFT_0899at 920.908 kb on + strand, within B158DRAFT_0899at 920.908 kb on + strand, within B158DRAFT_0899at 920.978 kb on + strand, within B158DRAFT_0899at 920.978 kb on - strand, within B158DRAFT_0899at 920.978 kb on - strand, within B158DRAFT_0899at 920.999 kb on + strand, within B158DRAFT_0899at 920.999 kb on + strand, within B158DRAFT_0899at 921.007 kb on - strand, within B158DRAFT_0899at 921.007 kb on - strand, within B158DRAFT_0899at 921.007 kb on - strand, within B158DRAFT_0899at 921.007 kb on - strand, within B158DRAFT_0899at 921.007 kb on - strand, within B158DRAFT_0899at 921.055 kb on + strand, within B158DRAFT_0899at 921.063 kb on - strand, within B158DRAFT_0899at 921.101 kb on - strand, within B158DRAFT_0899at 921.131 kb on + strand, within B158DRAFT_0899at 921.161 kb on - strand, within B158DRAFT_0899at 921.230 kb on + strandat 921.267 kb on - strandat 921.314 kb on + strandat 921.314 kb on + strandat 921.319 kb on + strandat 921.324 kb on + strandat 921.324 kb on + strandat 921.324 kb on + strandat 921.324 kb on + strandat 921.324 kb on + strandat 921.324 kb on + strandat 921.332 kb on - strandat 921.332 kb on - strandat 921.367 kb on + strandat 921.389 kb on + strandat 921.389 kb on + strandat 921.389 kb on + strandat 921.389 kb on + strandat 921.397 kb on - strandat 921.397 kb on - strandat 921.397 kb on - strandat 921.423 kb on + strandat 921.468 kb on + strandat 921.468 kb on + strandat 921.476 kb on - strandat 921.620 kb on + strandat 921.621 kb on - strandat 921.627 kb on + strandat 921.632 kb on + strandat 921.640 kb on - strandat 921.640 kb on - strandat 921.640 kb on - strandat 921.645 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml
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918,588 + B158DRAFT_0896 0.75 +1.3
918,632 - B158DRAFT_0896 0.79 +1.0
918,700 - B158DRAFT_0896 0.84 +1.8
918,700 - B158DRAFT_0896 0.84 +2.0
918,700 - B158DRAFT_0896 0.84 +3.6
918,740 + B158DRAFT_0896 0.87 +3.6
918,779 + +4.6
918,795 + +0.9
918,814 - +3.0
918,825 - +0.9
918,873 + -0.5
918,881 - -0.9
918,906 + -0.1
918,980 + -1.8
918,988 - -1.1
919,033 - +0.3
919,213 - B158DRAFT_0897 0.52 +0.0
919,246 + B158DRAFT_0897 0.63 -0.4
919,246 + B158DRAFT_0897 0.63 +0.4
919,246 + B158DRAFT_0897 0.63 -1.5
919,254 - B158DRAFT_0897 0.65 +0.5
919,286 - B158DRAFT_0897 0.75 +1.4
919,297 + B158DRAFT_0897 0.79 -0.6
919,305 - B158DRAFT_0897 0.81 -0.6
919,334 - -0.3
919,479 - -0.4
919,486 - -0.5
919,542 + -2.8
919,542 + +0.3
919,542 + +0.5
919,646 + B158DRAFT_0898 0.16 +0.3
919,652 + B158DRAFT_0898 0.17 -2.2
919,717 - B158DRAFT_0898 0.22 -0.6
919,760 + B158DRAFT_0898 0.26 -1.9
919,765 + B158DRAFT_0898 0.26 -0.9
919,773 - B158DRAFT_0898 0.27 -0.6
919,801 + B158DRAFT_0898 0.29 -0.3
919,874 + B158DRAFT_0898 0.35 -2.2
919,882 - B158DRAFT_0898 0.36 +0.1
919,927 + B158DRAFT_0898 0.39 -1.0
919,948 + B158DRAFT_0898 0.41 +0.7
919,956 - B158DRAFT_0898 0.42 +1.7
920,012 - B158DRAFT_0898 0.46 -1.6
920,205 - B158DRAFT_0898 0.62 +0.2
920,238 + B158DRAFT_0898 0.65 -0.5
920,242 + B158DRAFT_0898 0.65 +1.3
920,253 + B158DRAFT_0898 0.66 +0.1
920,256 - B158DRAFT_0898 0.67 -1.4
920,371 + B158DRAFT_0898 0.76 +1.1
920,405 - B158DRAFT_0898 0.79 -2.8
920,405 - B158DRAFT_0898 0.79 -1.4
920,405 - B158DRAFT_0898 0.79 -0.7
920,421 - B158DRAFT_0898 0.80 -2.1
920,439 + B158DRAFT_0898 0.82 +0.8
920,439 + B158DRAFT_0898 0.82 +1.2
920,439 + B158DRAFT_0898 0.82 +0.4
920,447 - B158DRAFT_0898 0.82 +0.4
920,447 - B158DRAFT_0898 0.82 +0.1
920,529 + B158DRAFT_0898 0.89 +0.7
920,529 + B158DRAFT_0898 0.89 -0.9
920,529 + B158DRAFT_0898 0.89 -0.2
920,529 + B158DRAFT_0898 0.89 -1.9
920,537 - B158DRAFT_0898 0.90 +0.2
920,537 - B158DRAFT_0898 0.90 -1.6
920,634 + -0.3
920,642 - +0.4
920,734 + -0.6
920,750 + -0.7
920,750 + -1.5
920,750 + -1.0
920,750 + -1.5
920,750 + +0.4
920,750 + -0.7
920,750 + -1.3
920,752 + +0.9
920,752 + +0.1
920,758 - B158DRAFT_0899 0.11 -0.6
920,758 - B158DRAFT_0899 0.11 +0.7
920,758 - B158DRAFT_0899 0.11 -0.2
920,758 - B158DRAFT_0899 0.11 +0.9
920,758 - B158DRAFT_0899 0.11 -2.4
920,758 - B158DRAFT_0899 0.11 +1.8
920,758 - B158DRAFT_0899 0.11 -2.1
920,758 - B158DRAFT_0899 0.11 -0.7
920,860 + B158DRAFT_0899 0.30 +1.1
920,868 - B158DRAFT_0899 0.32 +0.2
920,889 + B158DRAFT_0899 0.36 +0.4
920,908 + B158DRAFT_0899 0.39 -0.8
920,908 + B158DRAFT_0899 0.39 -1.0
920,908 + B158DRAFT_0899 0.39 -0.7
920,978 + B158DRAFT_0899 0.53 -1.0
920,978 - B158DRAFT_0899 0.53 +0.3
920,978 - B158DRAFT_0899 0.53 +1.1
920,999 + B158DRAFT_0899 0.57 -0.7
920,999 + B158DRAFT_0899 0.57 -1.6
921,007 - B158DRAFT_0899 0.58 +0.4
921,007 - B158DRAFT_0899 0.58 +1.2
921,007 - B158DRAFT_0899 0.58 +0.8
921,007 - B158DRAFT_0899 0.58 +0.7
921,007 - B158DRAFT_0899 0.58 +0.3
921,055 + B158DRAFT_0899 0.67 +0.1
921,063 - B158DRAFT_0899 0.69 +0.2
921,101 - B158DRAFT_0899 0.76 -1.4
921,131 + B158DRAFT_0899 0.82 +1.0
921,161 - B158DRAFT_0899 0.88 +0.6
921,230 + -2.3
921,267 - +0.3
921,314 + -2.5
921,314 + -1.9
921,319 + -0.1
921,324 + +0.2
921,324 + -1.1
921,324 + +0.5
921,324 + +1.4
921,324 + -0.6
921,324 + -0.6
921,332 - -1.1
921,332 - -1.3
921,367 + -1.3
921,389 + -1.5
921,389 + -0.7
921,389 + +0.0
921,389 + +0.3
921,397 - -2.4
921,397 - -2.5
921,397 - +1.0
921,423 + -0.7
921,468 + -0.7
921,468 + -0.2
921,476 - +0.4
921,620 + +0.4
921,621 - -1.0
921,627 + -1.4
921,632 + -0.8
921,640 - -2.0
921,640 - -0.6
921,640 - -0.8
921,645 - -0.1

Or see this region's nucleotide sequence