Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0743

Experiment: m.b. Fusidic 0.00049 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0742 and B158DRAFT_0743 are separated by 30 nucleotidesB158DRAFT_0743 and B158DRAFT_0744 are separated by 24 nucleotidesB158DRAFT_0744 and B158DRAFT_0745 are separated by 18 nucleotides B158DRAFT_0742: B158DRAFT_0742 - 2-octaprenylphenol hydroxylase (EC 1.14.13.-), at 745,235 to 746,881 _0742 B158DRAFT_0743: B158DRAFT_0743 - Uncharacterized protein conserved in bacteria, at 746,912 to 747,550 _0743 B158DRAFT_0744: B158DRAFT_0744 - ubiquinone/menaquinone biosynthesis methyltransferases, at 747,575 to 748,342 _0744 B158DRAFT_0745: B158DRAFT_0745 - Uncharacterized protein conserved in bacteria, at 748,361 to 748,765 _0745 Position (kb) 746 747 748Strain fitness (log2 ratio) -1 0 1at 746.978 kb on - strand, within B158DRAFT_0743at 747.380 kb on - strand, within B158DRAFT_0743at 747.476 kb on - strand, within B158DRAFT_0743at 747.476 kb on - strand, within B158DRAFT_0743at 747.538 kb on - strandat 747.566 kb on - strandat 748.352 kb on - strandat 748.352 kb on - strandat 748.352 kb on - strandat 748.465 kb on - strand, within B158DRAFT_0745at 748.478 kb on - strand, within B158DRAFT_0745at 748.499 kb on + strand, within B158DRAFT_0745at 748.502 kb on - strand, within B158DRAFT_0745at 748.519 kb on - strand, within B158DRAFT_0745at 748.535 kb on - strand, within B158DRAFT_0745

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml
remove
746,978 - B158DRAFT_0743 0.10 -1.1
747,380 - B158DRAFT_0743 0.73 +1.2
747,476 - B158DRAFT_0743 0.88 +0.3
747,476 - B158DRAFT_0743 0.88 +1.6
747,538 - -0.1
747,566 - -0.9
748,352 - -0.5
748,352 - +1.5
748,352 - +1.3
748,465 - B158DRAFT_0745 0.26 -0.5
748,478 - B158DRAFT_0745 0.29 -1.3
748,499 + B158DRAFT_0745 0.34 +0.8
748,502 - B158DRAFT_0745 0.35 -0.6
748,519 - B158DRAFT_0745 0.39 -0.2
748,535 - B158DRAFT_0745 0.43 -0.3

Or see this region's nucleotide sequence