Experiment: m.b. Fusidic 0.00049 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0723 and B158DRAFT_0724 are separated by 23 nucleotides B158DRAFT_0724 and B158DRAFT_0725 are separated by 172 nucleotides
B158DRAFT_0723: B158DRAFT_0723 - diguanylate cyclase (GGDEF) domain, at 723,235 to 725,304
_0723
B158DRAFT_0724: B158DRAFT_0724 - diguanylate cyclase (GGDEF) domain, at 725,328 to 727,466
_0724
B158DRAFT_0725: B158DRAFT_0725 - GTP-binding protein TypA/BipA, at 727,639 to 729,462
_0725
Position (kb) 725
726
727
728 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 724.374 kb on + strand, within B158DRAFT_0723 at 724.657 kb on + strand, within B158DRAFT_0723 at 724.657 kb on + strand, within B158DRAFT_0723 at 724.665 kb on - strand, within B158DRAFT_0723 at 724.665 kb on - strand, within B158DRAFT_0723 at 724.665 kb on - strand, within B158DRAFT_0723 at 724.674 kb on + strand, within B158DRAFT_0723 at 724.705 kb on + strand, within B158DRAFT_0723 at 724.728 kb on + strand, within B158DRAFT_0723 at 724.778 kb on - strand, within B158DRAFT_0723 at 725.177 kb on + strand at 725.190 kb on - strand at 725.382 kb on + strand at 725.390 kb on - strand at 725.454 kb on - strand at 725.768 kb on - strand, within B158DRAFT_0724 at 725.794 kb on - strand, within B158DRAFT_0724 at 725.794 kb on - strand, within B158DRAFT_0724 at 725.859 kb on + strand, within B158DRAFT_0724 at 726.095 kb on - strand, within B158DRAFT_0724 at 726.371 kb on + strand, within B158DRAFT_0724 at 726.591 kb on - strand, within B158DRAFT_0724 at 726.627 kb on + strand, within B158DRAFT_0724 at 726.638 kb on + strand, within B158DRAFT_0724 at 726.705 kb on + strand, within B158DRAFT_0724 at 726.857 kb on + strand, within B158DRAFT_0724 at 726.865 kb on - strand, within B158DRAFT_0724 at 727.048 kb on - strand, within B158DRAFT_0724 at 727.091 kb on + strand, within B158DRAFT_0724 at 727.091 kb on + strand, within B158DRAFT_0724 at 727.091 kb on + strand, within B158DRAFT_0724 at 727.091 kb on + strand, within B158DRAFT_0724 at 727.099 kb on - strand, within B158DRAFT_0724 at 727.099 kb on - strand, within B158DRAFT_0724 at 727.339 kb on + strand at 727.347 kb on - strand at 727.362 kb on - strand at 727.485 kb on + strand at 727.486 kb on - strand at 727.603 kb on - strand at 727.681 kb on + strand at 727.730 kb on + strand at 727.870 kb on - strand, within B158DRAFT_0725 at 727.921 kb on + strand, within B158DRAFT_0725 at 727.921 kb on + strand, within B158DRAFT_0725 at 727.921 kb on + strand, within B158DRAFT_0725 at 727.921 kb on + strand, within B158DRAFT_0725 at 727.921 kb on + strand, within B158DRAFT_0725 at 727.921 kb on + strand, within B158DRAFT_0725 at 727.921 kb on + strand, within B158DRAFT_0725 at 727.921 kb on + strand, within B158DRAFT_0725 at 727.921 kb on + strand, within B158DRAFT_0725 at 727.929 kb on - strand, within B158DRAFT_0725 at 727.929 kb on - strand, within B158DRAFT_0725 at 727.950 kb on + strand, within B158DRAFT_0725 at 727.950 kb on - strand, within B158DRAFT_0725 at 728.052 kb on - strand, within B158DRAFT_0725 at 728.124 kb on + strand, within B158DRAFT_0725 at 728.124 kb on + strand, within B158DRAFT_0725 at 728.145 kb on - strand, within B158DRAFT_0725 at 728.179 kb on - strand, within B158DRAFT_0725 at 728.277 kb on - strand, within B158DRAFT_0725 at 728.405 kb on - strand, within B158DRAFT_0725 at 728.406 kb on - strand, within B158DRAFT_0725
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml remove 724,374 + B158DRAFT_0723 0.55 -0.4 724,657 + B158DRAFT_0723 0.69 -1.7 724,657 + B158DRAFT_0723 0.69 -1.7 724,665 - B158DRAFT_0723 0.69 -1.3 724,665 - B158DRAFT_0723 0.69 -0.3 724,665 - B158DRAFT_0723 0.69 -0.6 724,674 + B158DRAFT_0723 0.70 +1.7 724,705 + B158DRAFT_0723 0.71 -0.1 724,728 + B158DRAFT_0723 0.72 -1.3 724,778 - B158DRAFT_0723 0.75 -0.9 725,177 + -1.6 725,190 - +0.0 725,382 + -0.7 725,390 - -0.5 725,454 - +1.6 725,768 - B158DRAFT_0724 0.21 -2.9 725,794 - B158DRAFT_0724 0.22 -0.2 725,794 - B158DRAFT_0724 0.22 -0.7 725,859 + B158DRAFT_0724 0.25 -2.5 726,095 - B158DRAFT_0724 0.36 -2.2 726,371 + B158DRAFT_0724 0.49 +3.7 726,591 - B158DRAFT_0724 0.59 -1.1 726,627 + B158DRAFT_0724 0.61 +1.1 726,638 + B158DRAFT_0724 0.61 +1.4 726,705 + B158DRAFT_0724 0.64 -0.9 726,857 + B158DRAFT_0724 0.71 -0.4 726,865 - B158DRAFT_0724 0.72 -1.2 727,048 - B158DRAFT_0724 0.80 -0.4 727,091 + B158DRAFT_0724 0.82 -0.9 727,091 + B158DRAFT_0724 0.82 -1.3 727,091 + B158DRAFT_0724 0.82 +0.2 727,091 + B158DRAFT_0724 0.82 +2.3 727,099 - B158DRAFT_0724 0.83 +0.5 727,099 - B158DRAFT_0724 0.83 -2.8 727,339 + -2.3 727,347 - +0.8 727,362 - -0.2 727,485 + -0.5 727,486 - -1.2 727,603 - -1.7 727,681 + +0.8 727,730 + -2.2 727,870 - B158DRAFT_0725 0.13 -0.2 727,921 + B158DRAFT_0725 0.15 -0.5 727,921 + B158DRAFT_0725 0.15 -2.3 727,921 + B158DRAFT_0725 0.15 -3.0 727,921 + B158DRAFT_0725 0.15 +0.4 727,921 + B158DRAFT_0725 0.15 -0.3 727,921 + B158DRAFT_0725 0.15 -0.3 727,921 + B158DRAFT_0725 0.15 -1.6 727,921 + B158DRAFT_0725 0.15 +1.2 727,921 + B158DRAFT_0725 0.15 -0.4 727,929 - B158DRAFT_0725 0.16 -0.9 727,929 - B158DRAFT_0725 0.16 -0.7 727,950 + B158DRAFT_0725 0.17 +0.7 727,950 - B158DRAFT_0725 0.17 +1.5 728,052 - B158DRAFT_0725 0.23 -0.9 728,124 + B158DRAFT_0725 0.27 +0.7 728,124 + B158DRAFT_0725 0.27 -3.0 728,145 - B158DRAFT_0725 0.28 -2.2 728,179 - B158DRAFT_0725 0.30 +0.7 728,277 - B158DRAFT_0725 0.35 -0.9 728,405 - B158DRAFT_0725 0.42 -0.2 728,406 - B158DRAFT_0725 0.42 +0.3
Or see this region's nucleotide sequence