Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0705

Experiment: m.b. Fusidic 0.00049 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0704 and B158DRAFT_0705 are separated by 28 nucleotidesB158DRAFT_0705 and B158DRAFT_0706 overlap by 14 nucleotides B158DRAFT_0704: B158DRAFT_0704 - C-terminal peptidase (prc), at 704,476 to 705,723 _0704 B158DRAFT_0705: B158DRAFT_0705 - Membrane-bound metallopeptidase, at 705,752 to 706,927 _0705 B158DRAFT_0706: B158DRAFT_0706 - phosphoglycerate mutase (EC 5.4.2.1), at 706,914 to 708,449 _0706 Position (kb) 705 706 707Strain fitness (log2 ratio) -1 0 1 2 3 4at 704.757 kb on - strand, within B158DRAFT_0704at 704.890 kb on - strand, within B158DRAFT_0704at 704.905 kb on - strand, within B158DRAFT_0704at 705.069 kb on - strand, within B158DRAFT_0704at 705.200 kb on + strand, within B158DRAFT_0704at 705.200 kb on + strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704at 705.208 kb on - strand, within B158DRAFT_0704at 705.455 kb on + strand, within B158DRAFT_0704at 705.482 kb on + strand, within B158DRAFT_0704at 705.484 kb on - strand, within B158DRAFT_0704at 705.484 kb on - strand, within B158DRAFT_0704at 705.490 kb on - strand, within B158DRAFT_0704at 705.490 kb on - strand, within B158DRAFT_0704at 705.490 kb on - strand, within B158DRAFT_0704at 705.492 kb on + strand, within B158DRAFT_0704at 705.639 kb on + strandat 705.654 kb on - strandat 705.682 kb on - strandat 705.703 kb on + strandat 705.711 kb on - strandat 705.717 kb on + strandat 705.817 kb on + strandat 705.842 kb on - strandat 705.865 kb on + strandat 705.921 kb on + strand, within B158DRAFT_0705at 705.934 kb on - strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.955 kb on + strand, within B158DRAFT_0705at 705.958 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.963 kb on - strand, within B158DRAFT_0705at 705.999 kb on + strand, within B158DRAFT_0705at 706.100 kb on + strand, within B158DRAFT_0705at 706.144 kb on - strand, within B158DRAFT_0705at 706.171 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.294 kb on + strand, within B158DRAFT_0705at 706.326 kb on - strand, within B158DRAFT_0705at 706.358 kb on + strand, within B158DRAFT_0705at 706.402 kb on + strand, within B158DRAFT_0705at 706.410 kb on - strand, within B158DRAFT_0705at 706.410 kb on - strand, within B158DRAFT_0705at 706.621 kb on - strand, within B158DRAFT_0705at 706.622 kb on - strand, within B158DRAFT_0705at 706.672 kb on + strand, within B158DRAFT_0705at 706.672 kb on + strand, within B158DRAFT_0705at 706.680 kb on - strand, within B158DRAFT_0705at 706.680 kb on - strand, within B158DRAFT_0705at 706.870 kb on + strandat 706.877 kb on + strandat 706.929 kb on + strandat 706.929 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml
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704,757 - B158DRAFT_0704 0.23 +2.7
704,890 - B158DRAFT_0704 0.33 +2.1
704,905 - B158DRAFT_0704 0.34 +3.7
705,069 - B158DRAFT_0704 0.48 +1.3
705,200 + B158DRAFT_0704 0.58 +0.5
705,200 + B158DRAFT_0704 0.58 +1.9
705,208 - B158DRAFT_0704 0.59 +1.7
705,208 - B158DRAFT_0704 0.59 +4.7
705,208 - B158DRAFT_0704 0.59 +1.9
705,208 - B158DRAFT_0704 0.59 +1.9
705,455 + B158DRAFT_0704 0.78 -1.1
705,482 + B158DRAFT_0704 0.81 +0.9
705,484 - B158DRAFT_0704 0.81 +1.2
705,484 - B158DRAFT_0704 0.81 +0.1
705,490 - B158DRAFT_0704 0.81 +3.7
705,490 - B158DRAFT_0704 0.81 +3.7
705,490 - B158DRAFT_0704 0.81 +1.9
705,492 + B158DRAFT_0704 0.81 +2.7
705,639 + +3.1
705,654 - +0.4
705,682 - +2.1
705,703 + +1.5
705,711 - +2.1
705,717 + -0.4
705,817 + +2.1
705,842 - +1.8
705,865 + +1.9
705,921 + B158DRAFT_0705 0.14 +1.3
705,934 - B158DRAFT_0705 0.15 +1.4
705,955 + B158DRAFT_0705 0.17 +2.7
705,955 + B158DRAFT_0705 0.17 +0.5
705,955 + B158DRAFT_0705 0.17 -0.4
705,955 + B158DRAFT_0705 0.17 +3.7
705,955 + B158DRAFT_0705 0.17 +3.7
705,958 - B158DRAFT_0705 0.18 +2.3
705,963 - B158DRAFT_0705 0.18 -0.2
705,963 - B158DRAFT_0705 0.18 +1.3
705,963 - B158DRAFT_0705 0.18 +0.4
705,963 - B158DRAFT_0705 0.18 +0.7
705,963 - B158DRAFT_0705 0.18 +1.7
705,963 - B158DRAFT_0705 0.18 +0.7
705,999 + B158DRAFT_0705 0.21 +1.7
706,100 + B158DRAFT_0705 0.30 +2.1
706,144 - B158DRAFT_0705 0.33 +1.3
706,171 + B158DRAFT_0705 0.36 +3.5
706,294 + B158DRAFT_0705 0.46 +2.2
706,294 + B158DRAFT_0705 0.46 -0.3
706,294 + B158DRAFT_0705 0.46 +3.5
706,294 + B158DRAFT_0705 0.46 +4.4
706,326 - B158DRAFT_0705 0.49 +2.3
706,358 + B158DRAFT_0705 0.52 +3.0
706,402 + B158DRAFT_0705 0.55 +2.3
706,410 - B158DRAFT_0705 0.56 +1.2
706,410 - B158DRAFT_0705 0.56 +4.4
706,621 - B158DRAFT_0705 0.74 +3.0
706,622 - B158DRAFT_0705 0.74 +1.8
706,672 + B158DRAFT_0705 0.78 +4.6
706,672 + B158DRAFT_0705 0.78 +0.6
706,680 - B158DRAFT_0705 0.79 +1.2
706,680 - B158DRAFT_0705 0.79 +3.6
706,870 + +0.2
706,877 + +2.3
706,929 + +0.3
706,929 + +2.5

Or see this region's nucleotide sequence