Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0631

Experiment: m.b. Fusidic 0.00049 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0630 and B158DRAFT_0631 are separated by 82 nucleotidesB158DRAFT_0631 and B158DRAFT_0632 are separated by 19 nucleotidesB158DRAFT_0632 and B158DRAFT_0633 are separated by 47 nucleotides B158DRAFT_0630: B158DRAFT_0630 - Cyclopropane fatty acid synthase and related methyltransferases, at 638,534 to 639,568 _0630 B158DRAFT_0631: B158DRAFT_0631 - Signal transduction histidine kinase, at 639,651 to 640,949 _0631 B158DRAFT_0632: B158DRAFT_0632 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 640,969 to 641,655 _0632 B158DRAFT_0633: B158DRAFT_0633 - putative RNA-binding protein, YhbY family, at 641,703 to 642,032 _0633 Position (kb) 639 640 641Strain fitness (log2 ratio) -2 -1 0 1 2 3at 638.654 kb on - strand, within B158DRAFT_0630at 638.802 kb on - strand, within B158DRAFT_0630at 638.835 kb on + strand, within B158DRAFT_0630at 638.933 kb on - strand, within B158DRAFT_0630at 639.023 kb on - strand, within B158DRAFT_0630at 639.115 kb on + strand, within B158DRAFT_0630at 639.145 kb on + strand, within B158DRAFT_0630at 639.301 kb on - strand, within B158DRAFT_0630at 639.301 kb on - strand, within B158DRAFT_0630at 639.372 kb on + strand, within B158DRAFT_0630at 639.380 kb on - strand, within B158DRAFT_0630at 639.427 kb on + strand, within B158DRAFT_0630at 639.427 kb on + strand, within B158DRAFT_0630at 639.435 kb on - strand, within B158DRAFT_0630at 639.555 kb on - strandat 639.555 kb on - strandat 639.686 kb on + strandat 639.716 kb on + strandat 639.870 kb on + strand, within B158DRAFT_0631at 639.878 kb on - strand, within B158DRAFT_0631at 639.878 kb on - strand, within B158DRAFT_0631at 640.036 kb on - strand, within B158DRAFT_0631at 640.126 kb on + strand, within B158DRAFT_0631at 640.158 kb on + strand, within B158DRAFT_0631at 640.168 kb on + strand, within B158DRAFT_0631at 640.168 kb on + strand, within B158DRAFT_0631at 640.176 kb on - strand, within B158DRAFT_0631at 640.176 kb on - strand, within B158DRAFT_0631at 640.176 kb on - strand, within B158DRAFT_0631at 640.176 kb on - strand, within B158DRAFT_0631at 640.176 kb on - strand, within B158DRAFT_0631at 640.176 kb on - strand, within B158DRAFT_0631at 640.176 kb on - strand, within B158DRAFT_0631at 640.176 kb on - strand, within B158DRAFT_0631at 640.176 kb on - strand, within B158DRAFT_0631at 640.176 kb on - strand, within B158DRAFT_0631at 640.176 kb on - strand, within B158DRAFT_0631at 640.176 kb on - strand, within B158DRAFT_0631at 640.176 kb on - strand, within B158DRAFT_0631at 640.176 kb on - strand, within B158DRAFT_0631at 640.176 kb on - strand, within B158DRAFT_0631at 640.258 kb on + strand, within B158DRAFT_0631at 640.287 kb on - strand, within B158DRAFT_0631at 640.600 kb on + strand, within B158DRAFT_0631at 640.696 kb on + strand, within B158DRAFT_0631at 640.807 kb on + strand, within B158DRAFT_0631at 640.817 kb on + strand, within B158DRAFT_0631at 640.817 kb on + strand, within B158DRAFT_0631at 640.825 kb on + strandat 640.825 kb on + strandat 640.825 kb on - strandat 640.833 kb on - strandat 640.833 kb on - strandat 640.858 kb on + strandat 641.010 kb on - strandat 641.020 kb on + strandat 641.020 kb on + strandat 641.062 kb on + strand, within B158DRAFT_0632at 641.070 kb on - strand, within B158DRAFT_0632at 641.105 kb on + strand, within B158DRAFT_0632at 641.117 kb on + strand, within B158DRAFT_0632at 641.134 kb on + strand, within B158DRAFT_0632at 641.135 kb on - strand, within B158DRAFT_0632at 641.135 kb on - strand, within B158DRAFT_0632at 641.142 kb on - strand, within B158DRAFT_0632at 641.184 kb on - strand, within B158DRAFT_0632at 641.184 kb on - strand, within B158DRAFT_0632at 641.285 kb on + strand, within B158DRAFT_0632at 641.306 kb on + strand, within B158DRAFT_0632at 641.316 kb on - strand, within B158DRAFT_0632at 641.400 kb on + strand, within B158DRAFT_0632at 641.408 kb on - strand, within B158DRAFT_0632at 641.468 kb on - strand, within B158DRAFT_0632at 641.511 kb on - strand, within B158DRAFT_0632at 641.518 kb on - strand, within B158DRAFT_0632at 641.535 kb on + strand, within B158DRAFT_0632at 641.535 kb on + strand, within B158DRAFT_0632at 641.535 kb on + strand, within B158DRAFT_0632at 641.556 kb on + strand, within B158DRAFT_0632at 641.635 kb on - strandat 641.680 kb on + strandat 641.688 kb on - strandat 641.688 kb on - strandat 641.761 kb on - strand, within B158DRAFT_0633at 641.782 kb on + strand, within B158DRAFT_0633at 641.790 kb on - strand, within B158DRAFT_0633at 641.790 kb on - strand, within B158DRAFT_0633at 641.809 kb on + strand, within B158DRAFT_0633at 641.817 kb on - strand, within B158DRAFT_0633at 641.854 kb on - strand, within B158DRAFT_0633at 641.914 kb on - strand, within B158DRAFT_0633at 641.946 kb on + strand, within B158DRAFT_0633at 641.946 kb on + strand, within B158DRAFT_0633at 641.946 kb on + strand, within B158DRAFT_0633

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml
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638,654 - B158DRAFT_0630 0.12 +2.6
638,802 - B158DRAFT_0630 0.26 -2.1
638,835 + B158DRAFT_0630 0.29 -1.3
638,933 - B158DRAFT_0630 0.39 -0.3
639,023 - B158DRAFT_0630 0.47 +0.3
639,115 + B158DRAFT_0630 0.56 -0.5
639,145 + B158DRAFT_0630 0.59 -1.5
639,301 - B158DRAFT_0630 0.74 -2.0
639,301 - B158DRAFT_0630 0.74 +0.0
639,372 + B158DRAFT_0630 0.81 -0.5
639,380 - B158DRAFT_0630 0.82 -0.6
639,427 + B158DRAFT_0630 0.86 -0.5
639,427 + B158DRAFT_0630 0.86 +0.8
639,435 - B158DRAFT_0630 0.87 -1.1
639,555 - -2.0
639,555 - +0.9
639,686 + +0.7
639,716 + -0.5
639,870 + B158DRAFT_0631 0.17 -2.5
639,878 - B158DRAFT_0631 0.17 +0.7
639,878 - B158DRAFT_0631 0.17 -1.2
640,036 - B158DRAFT_0631 0.30 -0.7
640,126 + B158DRAFT_0631 0.37 -1.4
640,158 + B158DRAFT_0631 0.39 -0.4
640,168 + B158DRAFT_0631 0.40 -0.4
640,168 + B158DRAFT_0631 0.40 -1.0
640,176 - B158DRAFT_0631 0.40 +1.3
640,176 - B158DRAFT_0631 0.40 -0.8
640,176 - B158DRAFT_0631 0.40 -0.5
640,176 - B158DRAFT_0631 0.40 -0.6
640,176 - B158DRAFT_0631 0.40 +0.4
640,176 - B158DRAFT_0631 0.40 +1.8
640,176 - B158DRAFT_0631 0.40 -1.1
640,176 - B158DRAFT_0631 0.40 +0.2
640,176 - B158DRAFT_0631 0.40 +0.0
640,176 - B158DRAFT_0631 0.40 +0.3
640,176 - B158DRAFT_0631 0.40 +0.4
640,176 - B158DRAFT_0631 0.40 +0.0
640,176 - B158DRAFT_0631 0.40 -0.5
640,176 - B158DRAFT_0631 0.40 +0.7
640,176 - B158DRAFT_0631 0.40 -0.9
640,258 + B158DRAFT_0631 0.47 -0.8
640,287 - B158DRAFT_0631 0.49 -0.7
640,600 + B158DRAFT_0631 0.73 -1.2
640,696 + B158DRAFT_0631 0.80 -0.3
640,807 + B158DRAFT_0631 0.89 +0.3
640,817 + B158DRAFT_0631 0.90 +0.4
640,817 + B158DRAFT_0631 0.90 +0.1
640,825 + +0.4
640,825 + -0.1
640,825 - +0.4
640,833 - -0.5
640,833 - -0.1
640,858 + +0.7
641,010 - +0.8
641,020 + +0.4
641,020 + -1.1
641,062 + B158DRAFT_0632 0.14 -0.6
641,070 - B158DRAFT_0632 0.15 +1.1
641,105 + B158DRAFT_0632 0.20 -1.5
641,117 + B158DRAFT_0632 0.22 -0.3
641,134 + B158DRAFT_0632 0.24 -1.0
641,135 - B158DRAFT_0632 0.24 -1.0
641,135 - B158DRAFT_0632 0.24 -1.5
641,142 - B158DRAFT_0632 0.25 -2.0
641,184 - B158DRAFT_0632 0.31 +1.1
641,184 - B158DRAFT_0632 0.31 +2.9
641,285 + B158DRAFT_0632 0.46 -0.0
641,306 + B158DRAFT_0632 0.49 -1.7
641,316 - B158DRAFT_0632 0.51 -0.3
641,400 + B158DRAFT_0632 0.63 -1.0
641,408 - B158DRAFT_0632 0.64 -0.8
641,468 - B158DRAFT_0632 0.73 -1.2
641,511 - B158DRAFT_0632 0.79 -1.8
641,518 - B158DRAFT_0632 0.80 +3.3
641,535 + B158DRAFT_0632 0.82 -2.4
641,535 + B158DRAFT_0632 0.82 -0.7
641,535 + B158DRAFT_0632 0.82 -0.4
641,556 + B158DRAFT_0632 0.85 -2.3
641,635 - -0.8
641,680 + +0.4
641,688 - +0.4
641,688 - -0.2
641,761 - B158DRAFT_0633 0.18 -1.4
641,782 + B158DRAFT_0633 0.24 +0.2
641,790 - B158DRAFT_0633 0.26 -0.8
641,790 - B158DRAFT_0633 0.26 -1.7
641,809 + B158DRAFT_0633 0.32 -2.2
641,817 - B158DRAFT_0633 0.35 -0.0
641,854 - B158DRAFT_0633 0.46 +0.4
641,914 - B158DRAFT_0633 0.64 -0.8
641,946 + B158DRAFT_0633 0.74 +1.1
641,946 + B158DRAFT_0633 0.74 -0.1
641,946 + B158DRAFT_0633 0.74 -2.4

Or see this region's nucleotide sequence