Experiment: m.b. Fusidic 0.00049 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0588 and B158DRAFT_0589 are separated by 272 nucleotides B158DRAFT_0589 and B158DRAFT_0590 are separated by 58 nucleotides
B158DRAFT_0588: B158DRAFT_0588 - ribonuclease PH, at 592,670 to 593,386
_0588
B158DRAFT_0589: B158DRAFT_0589 - hypothetical protein, at 593,659 to 594,528
_0589
B158DRAFT_0590: B158DRAFT_0590 - hypothetical protein, at 594,587 to 595,435
_0590
Position (kb) 593
594
595 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 592.660 kb on + strand at 592.660 kb on + strand at 592.668 kb on - strand at 592.755 kb on + strand, within B158DRAFT_0588 at 592.978 kb on + strand, within B158DRAFT_0588 at 592.986 kb on - strand, within B158DRAFT_0588 at 593.130 kb on + strand, within B158DRAFT_0588 at 593.162 kb on + strand, within B158DRAFT_0588 at 593.162 kb on + strand, within B158DRAFT_0588 at 593.170 kb on - strand, within B158DRAFT_0588 at 593.176 kb on + strand, within B158DRAFT_0588 at 593.184 kb on - strand, within B158DRAFT_0588 at 593.205 kb on + strand, within B158DRAFT_0588 at 593.213 kb on - strand, within B158DRAFT_0588 at 593.213 kb on - strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.216 kb on + strand, within B158DRAFT_0588 at 593.219 kb on - strand, within B158DRAFT_0588 at 593.224 kb on - strand, within B158DRAFT_0588 at 593.224 kb on - strand, within B158DRAFT_0588 at 593.224 kb on - strand, within B158DRAFT_0588 at 593.224 kb on - strand, within B158DRAFT_0588 at 593.224 kb on - strand, within B158DRAFT_0588 at 593.224 kb on - strand, within B158DRAFT_0588 at 593.224 kb on - strand, within B158DRAFT_0588 at 593.224 kb on - strand, within B158DRAFT_0588 at 593.224 kb on - strand, within B158DRAFT_0588 at 593.224 kb on - strand, within B158DRAFT_0588 at 593.224 kb on - strand, within B158DRAFT_0588 at 593.224 kb on - strand, within B158DRAFT_0588 at 593.224 kb on - strand, within B158DRAFT_0588 at 593.224 kb on - strand, within B158DRAFT_0588 at 593.224 kb on - strand, within B158DRAFT_0588 at 593.240 kb on + strand, within B158DRAFT_0588 at 593.240 kb on + strand, within B158DRAFT_0588 at 593.248 kb on - strand, within B158DRAFT_0588 at 593.248 kb on - strand, within B158DRAFT_0588 at 593.250 kb on + strand, within B158DRAFT_0588 at 593.250 kb on + strand, within B158DRAFT_0588 at 593.250 kb on + strand, within B158DRAFT_0588 at 593.250 kb on + strand, within B158DRAFT_0588 at 593.258 kb on - strand, within B158DRAFT_0588 at 593.258 kb on - strand, within B158DRAFT_0588 at 593.276 kb on - strand, within B158DRAFT_0588 at 593.302 kb on + strand, within B158DRAFT_0588 at 593.302 kb on + strand, within B158DRAFT_0588 at 593.302 kb on + strand, within B158DRAFT_0588 at 593.305 kb on - strand, within B158DRAFT_0588 at 593.310 kb on - strand, within B158DRAFT_0588 at 593.310 kb on - strand, within B158DRAFT_0588 at 593.310 kb on - strand, within B158DRAFT_0588 at 593.310 kb on - strand, within B158DRAFT_0588 at 593.408 kb on + strand at 593.408 kb on + strand at 593.416 kb on - strand at 593.416 kb on - strand at 593.418 kb on + strand at 593.469 kb on - strand at 593.474 kb on + strand at 593.475 kb on - strand at 593.482 kb on - strand at 593.482 kb on - strand at 593.606 kb on + strand at 593.624 kb on + strand at 593.625 kb on + strand at 593.625 kb on + strand at 593.632 kb on - strand at 593.632 kb on - strand at 593.632 kb on - strand at 593.633 kb on - strand at 593.633 kb on - strand at 593.675 kb on + strand at 593.675 kb on + strand at 593.675 kb on + strand at 593.680 kb on + strand at 593.680 kb on + strand at 593.683 kb on - strand at 593.683 kb on - strand at 593.688 kb on - strand at 593.726 kb on + strand at 593.777 kb on + strand, within B158DRAFT_0589 at 593.807 kb on + strand, within B158DRAFT_0589 at 593.830 kb on - strand, within B158DRAFT_0589 at 593.880 kb on + strand, within B158DRAFT_0589 at 593.910 kb on + strand, within B158DRAFT_0589 at 593.940 kb on - strand, within B158DRAFT_0589 at 593.981 kb on - strand, within B158DRAFT_0589 at 593.981 kb on - strand, within B158DRAFT_0589 at 593.981 kb on - strand, within B158DRAFT_0589 at 593.981 kb on - strand, within B158DRAFT_0589 at 593.981 kb on - strand, within B158DRAFT_0589 at 594.027 kb on + strand, within B158DRAFT_0589 at 594.027 kb on + strand, within B158DRAFT_0589 at 594.035 kb on - strand, within B158DRAFT_0589 at 594.035 kb on - strand, within B158DRAFT_0589 at 594.035 kb on - strand, within B158DRAFT_0589 at 594.086 kb on + strand, within B158DRAFT_0589 at 594.094 kb on - strand, within B158DRAFT_0589 at 594.191 kb on + strand, within B158DRAFT_0589 at 594.229 kb on + strand, within B158DRAFT_0589 at 594.229 kb on + strand, within B158DRAFT_0589 at 594.237 kb on - strand, within B158DRAFT_0589 at 594.237 kb on - strand, within B158DRAFT_0589 at 594.237 kb on - strand, within B158DRAFT_0589 at 594.258 kb on + strand, within B158DRAFT_0589 at 594.266 kb on + strand, within B158DRAFT_0589 at 594.266 kb on + strand, within B158DRAFT_0589 at 594.266 kb on + strand, within B158DRAFT_0589 at 594.266 kb on + strand, within B158DRAFT_0589 at 594.268 kb on - strand, within B158DRAFT_0589 at 594.273 kb on - strand, within B158DRAFT_0589 at 594.274 kb on - strand, within B158DRAFT_0589 at 594.274 kb on - strand, within B158DRAFT_0589 at 594.274 kb on - strand, within B158DRAFT_0589 at 594.276 kb on - strand, within B158DRAFT_0589 at 594.333 kb on - strand, within B158DRAFT_0589 at 594.351 kb on + strand, within B158DRAFT_0589 at 594.352 kb on - strand, within B158DRAFT_0589 at 594.352 kb on - strand, within B158DRAFT_0589 at 594.359 kb on - strand, within B158DRAFT_0589 at 594.381 kb on + strand, within B158DRAFT_0589 at 594.396 kb on + strand, within B158DRAFT_0589 at 594.411 kb on - strand, within B158DRAFT_0589 at 594.481 kb on - strand at 594.485 kb on + strand at 594.522 kb on + strand at 594.530 kb on - strand at 594.612 kb on + strand at 594.612 kb on + strand at 594.612 kb on + strand at 594.612 kb on + strand at 594.620 kb on - strand at 594.620 kb on - strand at 594.620 kb on - strand at 594.620 kb on - strand at 594.620 kb on - strand at 594.620 kb on - strand at 594.620 kb on - strand at 594.620 kb on - strand at 594.622 kb on + strand at 594.646 kb on - strand at 594.780 kb on - strand, within B158DRAFT_0590 at 594.842 kb on + strand, within B158DRAFT_0590 at 594.844 kb on + strand, within B158DRAFT_0590 at 594.860 kb on - strand, within B158DRAFT_0590 at 594.879 kb on - strand, within B158DRAFT_0590 at 594.887 kb on - strand, within B158DRAFT_0590 at 594.887 kb on - strand, within B158DRAFT_0590 at 594.889 kb on - strand, within B158DRAFT_0590 at 595.086 kb on + strand, within B158DRAFT_0590 at 595.163 kb on - strand, within B158DRAFT_0590 at 595.185 kb on - strand, within B158DRAFT_0590 at 595.219 kb on + strand, within B158DRAFT_0590 at 595.233 kb on - strand, within B158DRAFT_0590 at 595.249 kb on - strand, within B158DRAFT_0590 at 595.328 kb on + strand, within B158DRAFT_0590 at 595.345 kb on - strand, within B158DRAFT_0590 at 595.447 kb on + strand at 595.504 kb on - strand at 595.504 kb on - strand at 595.504 kb on - strand at 595.511 kb on - strand at 595.516 kb on + strand at 595.516 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.00049 mg/ml remove 592,660 + -2.0 592,660 + +0.8 592,668 - -0.2 592,755 + B158DRAFT_0588 0.12 +1.0 592,978 + B158DRAFT_0588 0.43 -1.2 592,986 - B158DRAFT_0588 0.44 +0.1 593,130 + B158DRAFT_0588 0.64 -0.9 593,162 + B158DRAFT_0588 0.69 -0.1 593,162 + B158DRAFT_0588 0.69 -0.9 593,170 - B158DRAFT_0588 0.70 +0.0 593,176 + B158DRAFT_0588 0.71 -0.2 593,184 - B158DRAFT_0588 0.72 +0.1 593,205 + B158DRAFT_0588 0.75 +0.7 593,213 - B158DRAFT_0588 0.76 +0.1 593,213 - B158DRAFT_0588 0.76 +0.4 593,216 + B158DRAFT_0588 0.76 -1.2 593,216 + B158DRAFT_0588 0.76 +2.0 593,216 + B158DRAFT_0588 0.76 -1.0 593,216 + B158DRAFT_0588 0.76 -0.1 593,216 + B158DRAFT_0588 0.76 +1.1 593,216 + B158DRAFT_0588 0.76 -2.1 593,216 + B158DRAFT_0588 0.76 +0.4 593,216 + B158DRAFT_0588 0.76 -0.6 593,216 + B158DRAFT_0588 0.76 +2.5 593,216 + B158DRAFT_0588 0.76 -0.7 593,216 + B158DRAFT_0588 0.76 -0.7 593,216 + B158DRAFT_0588 0.76 -0.8 593,216 + B158DRAFT_0588 0.76 +1.3 593,216 + B158DRAFT_0588 0.76 -1.7 593,216 + B158DRAFT_0588 0.76 -0.2 593,216 + B158DRAFT_0588 0.76 +1.2 593,216 + B158DRAFT_0588 0.76 -2.1 593,216 + B158DRAFT_0588 0.76 +0.1 593,216 + B158DRAFT_0588 0.76 +1.3 593,216 + B158DRAFT_0588 0.76 -0.6 593,216 + B158DRAFT_0588 0.76 +2.9 593,216 + B158DRAFT_0588 0.76 +0.6 593,216 + B158DRAFT_0588 0.76 -0.9 593,216 + B158DRAFT_0588 0.76 -1.4 593,216 + B158DRAFT_0588 0.76 -0.6 593,216 + B158DRAFT_0588 0.76 -0.9 593,219 - B158DRAFT_0588 0.77 +1.7 593,224 - B158DRAFT_0588 0.77 +2.1 593,224 - B158DRAFT_0588 0.77 -0.8 593,224 - B158DRAFT_0588 0.77 +0.0 593,224 - B158DRAFT_0588 0.77 -1.0 593,224 - B158DRAFT_0588 0.77 -0.3 593,224 - B158DRAFT_0588 0.77 +0.4 593,224 - B158DRAFT_0588 0.77 +0.3 593,224 - B158DRAFT_0588 0.77 +0.6 593,224 - B158DRAFT_0588 0.77 +0.7 593,224 - B158DRAFT_0588 0.77 -0.4 593,224 - B158DRAFT_0588 0.77 -0.5 593,224 - B158DRAFT_0588 0.77 -0.5 593,224 - B158DRAFT_0588 0.77 -0.3 593,224 - B158DRAFT_0588 0.77 +0.0 593,224 - B158DRAFT_0588 0.77 +1.5 593,240 + B158DRAFT_0588 0.79 -2.2 593,240 + B158DRAFT_0588 0.79 -0.3 593,248 - B158DRAFT_0588 0.81 -0.5 593,248 - B158DRAFT_0588 0.81 -0.4 593,250 + B158DRAFT_0588 0.81 -1.0 593,250 + B158DRAFT_0588 0.81 +2.2 593,250 + B158DRAFT_0588 0.81 -0.1 593,250 + B158DRAFT_0588 0.81 -0.8 593,258 - B158DRAFT_0588 0.82 -1.9 593,258 - B158DRAFT_0588 0.82 +3.8 593,276 - B158DRAFT_0588 0.85 -1.3 593,302 + B158DRAFT_0588 0.88 +1.6 593,302 + B158DRAFT_0588 0.88 +1.0 593,302 + B158DRAFT_0588 0.88 +0.5 593,305 - B158DRAFT_0588 0.89 -1.0 593,310 - B158DRAFT_0588 0.89 +0.0 593,310 - B158DRAFT_0588 0.89 -0.2 593,310 - B158DRAFT_0588 0.89 -0.2 593,310 - B158DRAFT_0588 0.89 +0.2 593,408 + -0.3 593,408 + -0.0 593,416 - +0.1 593,416 - -0.6 593,418 + +0.6 593,469 - -0.4 593,474 + +0.3 593,475 - -1.5 593,482 - +4.2 593,482 - -0.0 593,606 + -1.0 593,624 + -0.6 593,625 + -1.6 593,625 + +0.3 593,632 - -1.3 593,632 - -1.4 593,632 - +0.6 593,633 - +2.8 593,633 - -1.7 593,675 + -0.8 593,675 + -0.7 593,675 + -0.3 593,680 + -1.1 593,680 + +0.1 593,683 - -0.4 593,683 - -2.6 593,688 - -0.8 593,726 + -0.6 593,777 + B158DRAFT_0589 0.14 -0.4 593,807 + B158DRAFT_0589 0.17 +1.6 593,830 - B158DRAFT_0589 0.20 -2.2 593,880 + B158DRAFT_0589 0.25 -1.4 593,910 + B158DRAFT_0589 0.29 -0.2 593,940 - B158DRAFT_0589 0.32 -0.2 593,981 - B158DRAFT_0589 0.37 +0.3 593,981 - B158DRAFT_0589 0.37 -0.7 593,981 - B158DRAFT_0589 0.37 -1.2 593,981 - B158DRAFT_0589 0.37 +0.4 593,981 - B158DRAFT_0589 0.37 +0.9 594,027 + B158DRAFT_0589 0.42 +2.7 594,027 + B158DRAFT_0589 0.42 -0.4 594,035 - B158DRAFT_0589 0.43 -0.5 594,035 - B158DRAFT_0589 0.43 -1.0 594,035 - B158DRAFT_0589 0.43 -0.8 594,086 + B158DRAFT_0589 0.49 -0.4 594,094 - B158DRAFT_0589 0.50 -0.5 594,191 + B158DRAFT_0589 0.61 -3.0 594,229 + B158DRAFT_0589 0.66 -2.5 594,229 + B158DRAFT_0589 0.66 -1.7 594,237 - B158DRAFT_0589 0.66 -2.7 594,237 - B158DRAFT_0589 0.66 -0.7 594,237 - B158DRAFT_0589 0.66 -0.7 594,258 + B158DRAFT_0589 0.69 -0.2 594,266 + B158DRAFT_0589 0.70 -0.6 594,266 + B158DRAFT_0589 0.70 -0.5 594,266 + B158DRAFT_0589 0.70 -0.3 594,266 + B158DRAFT_0589 0.70 -1.0 594,268 - B158DRAFT_0589 0.70 -0.4 594,273 - B158DRAFT_0589 0.71 +0.2 594,274 - B158DRAFT_0589 0.71 -1.1 594,274 - B158DRAFT_0589 0.71 -1.8 594,274 - B158DRAFT_0589 0.71 -0.2 594,276 - B158DRAFT_0589 0.71 -2.6 594,333 - B158DRAFT_0589 0.77 -1.6 594,351 + B158DRAFT_0589 0.80 +0.0 594,352 - B158DRAFT_0589 0.80 -1.2 594,352 - B158DRAFT_0589 0.80 -0.6 594,359 - B158DRAFT_0589 0.80 +1.1 594,381 + B158DRAFT_0589 0.83 -1.4 594,396 + B158DRAFT_0589 0.85 -0.4 594,411 - B158DRAFT_0589 0.86 -3.0 594,481 - -1.6 594,485 + -1.3 594,522 + -2.6 594,530 - +0.1 594,612 + -0.6 594,612 + +1.4 594,612 + +0.4 594,612 + -1.1 594,620 - -1.0 594,620 - +0.3 594,620 - +0.2 594,620 - +0.6 594,620 - +0.4 594,620 - +0.1 594,620 - -2.5 594,620 - -0.6 594,622 + -0.8 594,646 - -0.6 594,780 - B158DRAFT_0590 0.23 -0.2 594,842 + B158DRAFT_0590 0.30 +3.8 594,844 + B158DRAFT_0590 0.30 -0.5 594,860 - B158DRAFT_0590 0.32 -1.0 594,879 - B158DRAFT_0590 0.34 -0.8 594,887 - B158DRAFT_0590 0.35 -0.5 594,887 - B158DRAFT_0590 0.35 -2.3 594,889 - B158DRAFT_0590 0.36 -1.2 595,086 + B158DRAFT_0590 0.59 -0.2 595,163 - B158DRAFT_0590 0.68 -1.9 595,185 - B158DRAFT_0590 0.70 -0.5 595,219 + B158DRAFT_0590 0.74 -1.9 595,233 - B158DRAFT_0590 0.76 -0.1 595,249 - B158DRAFT_0590 0.78 -0.9 595,328 + B158DRAFT_0590 0.87 +1.9 595,345 - B158DRAFT_0590 0.89 +0.0 595,447 + -0.1 595,504 - -2.3 595,504 - -2.1 595,504 - +0.9 595,511 - -2.4 595,516 + +0.2 595,516 + -0.5
Or see this region's nucleotide sequence